GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001797-TA|BGIBMGA001797-PA|IPR002737|Protein of unknown
function DUF52
         (304 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p pro...   383   e-106
AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA...   383   e-106

>AY061544-1|AAL29092.1|  295|Drosophila melanogaster LP04475p
           protein.
          Length = 295

 Score =  383 bits (943), Expect = e-106
 Identities = 184/281 (65%), Positives = 211/281 (75%), Gaps = 1/281 (0%)

Query: 24  NSGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVSPVVVKRIFILG 83
           +SG+ELSRQLD WL  ADL+HGPARAIIAPH              RQVSPVVVKRIFILG
Sbjct: 15  DSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYRQVSPVVVKRIFILG 74

Query: 84  PSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLP 143
           PSHHVR+ GCALS   KY+TPLYDL ID QI +ELE T +F  MD +TDE+EHSIEMHLP
Sbjct: 75  PSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSWMDMKTDEDEHSIEMHLP 134

Query: 144 YIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLADPQNLLVISSDFCHWGSRFR 203
           YIAKVME+YK  FTI+PILVGSL PE+EA+YG++L+ YL DP NL VISSDFCHWG RF 
Sbjct: 135 YIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFS 194

Query: 204 YTWKDSSRGHIYQSIEWLDKLGMDLIEKMDPKAFTDYLNKYGNTICGRHPIGVLLQAISK 263
           YT+ DSS G I++SIE LDK GMD+IE ++P +FT+YL KY NTICGRHPIGV+L A+  
Sbjct: 195 YTYYDSSCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRHPIGVMLGAVKA 254

Query: 264 LSSQSNAPKMSLKFLKYAQSSQCMNXXXXXXXXXXXXLVFE 304
           L  Q    KMS KFLKYAQSSQC +            LVFE
Sbjct: 255 LQDQ-GYDKMSFKFLKYAQSSQCQDIEDSSVSYASGSLVFE 294


>AE014297-1612|AAF54889.1|  295|Drosophila melanogaster CG8031-PA
           protein.
          Length = 295

 Score =  383 bits (943), Expect = e-106
 Identities = 184/281 (65%), Positives = 211/281 (75%), Gaps = 1/281 (0%)

Query: 24  NSGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVSPVVVKRIFILG 83
           +SG+ELSRQLD WL  ADL+HGPARAIIAPH              RQVSPVVVKRIFILG
Sbjct: 15  DSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYRQVSPVVVKRIFILG 74

Query: 84  PSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLP 143
           PSHHVR+ GCALS   KY+TPLYDL ID QI +ELE T +F  MD +TDE+EHSIEMHLP
Sbjct: 75  PSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSWMDMKTDEDEHSIEMHLP 134

Query: 144 YIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLADPQNLLVISSDFCHWGSRFR 203
           YIAKVME+YK  FTI+PILVGSL PE+EA+YG++L+ YL DP NL VISSDFCHWG RF 
Sbjct: 135 YIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFS 194

Query: 204 YTWKDSSRGHIYQSIEWLDKLGMDLIEKMDPKAFTDYLNKYGNTICGRHPIGVLLQAISK 263
           YT+ DSS G I++SIE LDK GMD+IE ++P +FT+YL KY NTICGRHPIGV+L A+  
Sbjct: 195 YTYYDSSCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRHPIGVMLGAVKA 254

Query: 264 LSSQSNAPKMSLKFLKYAQSSQCMNXXXXXXXXXXXXLVFE 304
           L  Q    KMS KFLKYAQSSQC +            LVFE
Sbjct: 255 LQDQ-GYDKMSFKFLKYAQSSQCQDIEDSSVSYASGSLVFE 294


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,191,190
Number of Sequences: 52641
Number of extensions: 501885
Number of successful extensions: 1266
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1262
Number of HSP's gapped (non-prelim): 2
length of query: 304
length of database: 24,830,863
effective HSP length: 85
effective length of query: 219
effective length of database: 20,356,378
effective search space: 4458046782
effective search space used: 4458046782
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)