BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001797-TA|BGIBMGA001797-PA|IPR002737|Protein of unknown function DUF52 (304 letters) Database: fruitfly 52,641 sequences; 24,830,863 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY061544-1|AAL29092.1| 295|Drosophila melanogaster LP04475p pro... 383 e-106 AE014297-1612|AAF54889.1| 295|Drosophila melanogaster CG8031-PA... 383 e-106 >AY061544-1|AAL29092.1| 295|Drosophila melanogaster LP04475p protein. Length = 295 Score = 383 bits (943), Expect = e-106 Identities = 184/281 (65%), Positives = 211/281 (75%), Gaps = 1/281 (0%) Query: 24 NSGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVSPVVVKRIFILG 83 +SG+ELSRQLD WL ADL+HGPARAIIAPH RQVSPVVVKRIFILG Sbjct: 15 DSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYRQVSPVVVKRIFILG 74 Query: 84 PSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLP 143 PSHHVR+ GCALS KY+TPLYDL ID QI +ELE T +F MD +TDE+EHSIEMHLP Sbjct: 75 PSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSWMDMKTDEDEHSIEMHLP 134 Query: 144 YIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLADPQNLLVISSDFCHWGSRFR 203 YIAKVME+YK FTI+PILVGSL PE+EA+YG++L+ YL DP NL VISSDFCHWG RF Sbjct: 135 YIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFS 194 Query: 204 YTWKDSSRGHIYQSIEWLDKLGMDLIEKMDPKAFTDYLNKYGNTICGRHPIGVLLQAISK 263 YT+ DSS G I++SIE LDK GMD+IE ++P +FT+YL KY NTICGRHPIGV+L A+ Sbjct: 195 YTYYDSSCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRHPIGVMLGAVKA 254 Query: 264 LSSQSNAPKMSLKFLKYAQSSQCMNXXXXXXXXXXXXLVFE 304 L Q KMS KFLKYAQSSQC + LVFE Sbjct: 255 LQDQ-GYDKMSFKFLKYAQSSQCQDIEDSSVSYASGSLVFE 294 >AE014297-1612|AAF54889.1| 295|Drosophila melanogaster CG8031-PA protein. Length = 295 Score = 383 bits (943), Expect = e-106 Identities = 184/281 (65%), Positives = 211/281 (75%), Gaps = 1/281 (0%) Query: 24 NSGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVSPVVVKRIFILG 83 +SG+ELSRQLD WL ADL+HGPARAIIAPH RQVSPVVVKRIFILG Sbjct: 15 DSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTYCGACAAFAYRQVSPVVVKRIFILG 74 Query: 84 PSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLP 143 PSHHVR+ GCALS KY+TPLYDL ID QI +ELE T +F MD +TDE+EHSIEMHLP Sbjct: 75 PSHHVRLRGCALSVAKKYRTPLYDLKIDAQINSELEKTGKFSWMDMKTDEDEHSIEMHLP 134 Query: 144 YIAKVMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLADPQNLLVISSDFCHWGSRFR 203 YIAKVME+YK FTI+PILVGSL PE+EA+YG++L+ YL DP NL VISSDFCHWG RF Sbjct: 135 YIAKVMEDYKDQFTIVPILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFS 194 Query: 204 YTWKDSSRGHIYQSIEWLDKLGMDLIEKMDPKAFTDYLNKYGNTICGRHPIGVLLQAISK 263 YT+ DSS G I++SIE LDK GMD+IE ++P +FT+YL KY NTICGRHPIGV+L A+ Sbjct: 195 YTYYDSSCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRHPIGVMLGAVKA 254 Query: 264 LSSQSNAPKMSLKFLKYAQSSQCMNXXXXXXXXXXXXLVFE 304 L Q KMS KFLKYAQSSQC + LVFE Sbjct: 255 LQDQ-GYDKMSFKFLKYAQSSQCQDIEDSSVSYASGSLVFE 294 Database: fruitfly Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 24,830,863 Number of sequences in database: 52,641 Lambda K H 0.321 0.137 0.412 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,191,190 Number of Sequences: 52641 Number of extensions: 501885 Number of successful extensions: 1266 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1262 Number of HSP's gapped (non-prelim): 2 length of query: 304 length of database: 24,830,863 effective HSP length: 85 effective length of query: 219 effective length of database: 20,356,378 effective search space: 4458046782 effective search space used: 4458046782 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 62 (29.1 bits)
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