Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001797-TA|BGIBMGA001797-PA|IPR002737|Protein of unknown
function DUF52
(304 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical pr... 245 4e-65
U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical pr... 245 4e-65
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 32 0.44
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 32 0.44
Z81555-2|CAB04514.1| 158|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 28 7.2
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 28 7.2
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 28 7.2
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 28 7.2
>U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical
protein C37C3.8a protein.
Length = 302
Score = 245 bits (599), Expect = 4e-65
Identities = 126/259 (48%), Positives = 163/259 (62%), Gaps = 4/259 (1%)
Query: 28 ELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVSPVVVKRIFILGPSHH 87
+L RQL WL A G ARA+I+PH +QV V+R+FILGPSH
Sbjct: 26 DLDRQLTKWLDNAGPRIGTARALISPHAGYSYCGETAAYAFKQVVSSAVERVFILGPSHV 85
Query: 88 VRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAK 147
V + GCA+++ KY+TPL DL +D +I EL ATR FD MD + +E+EHSIEM LP+IAK
Sbjct: 86 VALNGCAITTCSKYRTPLGDLIVDHKINEELRATRHFDLMDRRDEESEHSIEMQLPFIAK 145
Query: 148 VMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLADPQNLLVISSDFCHWGSRFRYTWK 207
VM + +TI+P+LVGSL ++ YG I A Y+ DP+NL VISSDFCHWG RF ++
Sbjct: 146 VMGSKR--YTIVPVLVGSLPGSRQQTYGNIFAHYMEDPRNLFVISSDFCHWGERFSFSPY 203
Query: 208 D-SSRGHIYQSIEWLDKLGMDLIEKMDPKAFTDYLNKYGNTICGRHPIGVLLQAISKLSS 266
D S IY+ I +DK GM IE ++P AF DYL K NTICGR+PI ++LQA
Sbjct: 204 DRHSSIPIYEQITNMDKQGMSAIETLNPAAFNDYLKKTQNTICGRNPILIMLQAAEHFRI 263
Query: 267 QSNAPKMSLKFLKYAQSSQ 285
SN +FL Y QS++
Sbjct: 264 -SNNHTHEFRFLHYTQSNK 281
>U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical
protein C37C3.8b protein.
Length = 350
Score = 245 bits (599), Expect = 4e-65
Identities = 126/259 (48%), Positives = 163/259 (62%), Gaps = 4/259 (1%)
Query: 28 ELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVSPVVVKRIFILGPSHH 87
+L RQL WL A G ARA+I+PH +QV V+R+FILGPSH
Sbjct: 74 DLDRQLTKWLDNAGPRIGTARALISPHAGYSYCGETAAYAFKQVVSSAVERVFILGPSHV 133
Query: 88 VRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAK 147
V + GCA+++ KY+TPL DL +D +I EL ATR FD MD + +E+EHSIEM LP+IAK
Sbjct: 134 VALNGCAITTCSKYRTPLGDLIVDHKINEELRATRHFDLMDRRDEESEHSIEMQLPFIAK 193
Query: 148 VMEEYKTSFTIIPILVGSLTPEKEAKYGAILAPYLADPQNLLVISSDFCHWGSRFRYTWK 207
VM + +TI+P+LVGSL ++ YG I A Y+ DP+NL VISSDFCHWG RF ++
Sbjct: 194 VMGSKR--YTIVPVLVGSLPGSRQQTYGNIFAHYMEDPRNLFVISSDFCHWGERFSFSPY 251
Query: 208 D-SSRGHIYQSIEWLDKLGMDLIEKMDPKAFTDYLNKYGNTICGRHPIGVLLQAISKLSS 266
D S IY+ I +DK GM IE ++P AF DYL K NTICGR+PI ++LQA
Sbjct: 252 DRHSSIPIYEQITNMDKQGMSAIETLNPAAFNDYLKKTQNTICGRNPILIMLQAAEHFRI 311
Query: 267 QSNAPKMSLKFLKYAQSSQ 285
SN +FL Y QS++
Sbjct: 312 -SNNHTHEFRFLHYTQSNK 329
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 102 QTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAKVMEEYKTSFTIIP 160
QT + L ++ + A ++A R ++ +T E E ++ + L + ++E+YK +FT++P
Sbjct: 514 QTVIRTLLFNQTVKAAVDAPRFHNQYLPETTETEEAMPLALREV--LVEQYKQNFTVVP 570
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 102 QTPLYDLTIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAKVMEEYKTSFTIIP 160
QT + L ++ + A ++A R ++ +T E E ++ + L + ++E+YK +FT++P
Sbjct: 544 QTVIRTLLFNQTVKAAVDAPRFHNQYLPETTETEEAMPLALREV--LVEQYKQNFTVVP 600
>Z81555-2|CAB04514.1| 158|Caenorhabditis elegans Hypothetical
protein F58E10.7 protein.
Length = 158
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 231 KMDPKAFTDYLNKYGNTICGRHPIGVLLQAISKLSSQSNAPKMSLKFL 278
+MD +T+ L YGN I G I V LQ + + ++ ++SL+ L
Sbjct: 83 QMDSDDYTNILAMYGNPIPGHAVINVCLQEAFQFHAANHPSQVSLRCL 130
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 100 KYQTPLYDL--TIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAKVMEEYKTSFT 157
KYQ + +L T+D A +EA + + EQ + S+E + +V+++Y +
Sbjct: 545 KYQAEIAELEMTVDNLNRANIEAQKTIKKQSEQLKILQASLEDTQRQLQQVLDQYALAQR 604
Query: 158 IIPILVGSLTPEKEAKYGAILA 179
+ L L K A AI A
Sbjct: 605 KVAALSAELEECKTALDNAIRA 626
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 100 KYQTPLYDL--TIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAKVMEEYKTSFT 157
KYQ + +L T+D A +EA + + EQ + S+E + +V+++Y +
Sbjct: 545 KYQAEIAELEMTVDNLNRANIEAQKTIKKQSEQLKILQASLEDTQRQLQQVLDQYALAQR 604
Query: 158 IIPILVGSLTPEKEAKYGAILA 179
+ L L K A AI A
Sbjct: 605 KVAALSAELEECKTALDNAIRA 626
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 100 KYQTPLYDL--TIDKQIYAELEATRQFDRMDEQTDENEHSIEMHLPYIAKVMEEYKTSFT 157
KYQ + +L T+D A +EA + + EQ + S+E + +V+++Y +
Sbjct: 561 KYQAEIAELEMTVDNLNRANIEAQKTIKKQSEQLKILQASLEDTQRQLQQVLDQYALAQR 620
Query: 158 IIPILVGSLTPEKEAKYGAILA 179
+ L L K A AI A
Sbjct: 621 KVAALSAELEECKTALDNAIRA 642
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 73 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTD 132
P+++ ++ + P R GC LSS D L D+ ++Q+Y A+ D TD
Sbjct: 395 PIMLAYVYGVVPLSLCRNGGCGLSSSDS-SLALADID-EEQLYGTPGASAPVDLSQFMTD 452
Query: 133 ENEHSIEMHL-PYIAKVMEEYKTSF 156
++ + + P I + E KT +
Sbjct: 453 ASKREDIVSIDPSILSMPREMKTRY 477
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 73 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEQTD 132
P+++ ++ + P R GC LSS D L D+ ++Q+Y A+ D TD
Sbjct: 395 PIMLAYVYGVVPLSLCRNGGCGLSSSDS-SLALADID-EEQLYGTPGASAPVDLSQFMTD 452
Query: 133 ENEHSIEMHL-PYIAKVMEEYKTSF 156
++ + + P I + E KT +
Sbjct: 453 ASKREDIVSIDPSILSMPREMKTRY 477
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.137 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,711,651
Number of Sequences: 27539
Number of extensions: 260026
Number of successful extensions: 562
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 555
Number of HSP's gapped (non-prelim): 10
length of query: 304
length of database: 12,573,161
effective HSP length: 81
effective length of query: 223
effective length of database: 10,342,502
effective search space: 2306377946
effective search space used: 2306377946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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