GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001796-TA|BGIBMGA001796-PA|undefined
         (272 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    28   0.065
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.5  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   3.2  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   5.7  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   7.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.9  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   9.9  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 28.3 bits (60), Expect = 0.065
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 209 KHSNLDIDKFKEYEKTQKSLVE--LEKERHDLERLRTDFEKKFPDLTEKLLEEVSEK 263
           K+ N+D++   + E+  KS V+  LEK R   + L  + +K  PD  E    + SEK
Sbjct: 29  KYDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGL--ELKKNMPDAIETDCSKCSEK 83


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 180 IDFGYDKESGHKLLLDAVTDAIEGLENIKKHSNL-DIDKFKEYEKTQKSLVE 230
           ID GY  ++ H   L   +  +  +E +  H N+ +I K  +  + +++LV+
Sbjct: 522 IDKGYAYDANHPFHLHGHSFRVVAMERVGSHVNVSEILKMDQNGQIKRNLVD 573


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 230 ELEKERHDLERLRTDFEKKFPDLTEKLLEEVSEKIAQVMNTDE 272
           +L  + HDL  + TD E   P     ++    E+   V+N D+
Sbjct: 359 QLTIQGHDLTLIATDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 230 ELEKERHDLERLRTDFEKKFPDLTEKLLEEVSEKIAQVMNTDE 272
           +L  + HDL  + TD E   P     ++    E+   V+N D+
Sbjct: 359 QLTIQGHDLTLIATDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/52 (21%), Positives = 25/52 (48%)

Query: 212 NLDIDKFKEYEKTQKSLVELEKERHDLERLRTDFEKKFPDLTEKLLEEVSEK 263
           N+DID+  + ++  K+ ++   E+        + +K  PD  +    + +EK
Sbjct: 26  NIDIDEILKNDRLTKNYLDCILEKGKCTPEGEELKKDIPDALQNECAKCNEK 77


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 209 KHSNLDIDKFKEYEKTQKSLVELEKERHDLERLRTDFEKKFPDLTEKLLEEVSEK 263
           K+ N+D+++  + ++  K+      ER        + +K  PD       + +EK
Sbjct: 27  KYDNIDLEEILKSDRLLKNYFNCLMERGTCSPDGEELKKALPDALHSGCSKCTEK 81


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 192 LLLDAVTDAIEGLENIK---KHSNLDIDKFKEYEKTQKSLVELEKERHDLERLRTDFEKK 248
           LL   +  A    EN K   K+ N+D+D+  + ++  K+ V    E+        + ++ 
Sbjct: 7   LLFFVIAIASSLAENSKYTTKYDNVDLDEIIKSDRLLKNYVNCLLEKGKCTPDGAELKRH 66

Query: 249 FPDLTEKLLEEVSE 262
            PD       + SE
Sbjct: 67  LPDALHTECSKCSE 80


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query: 146  EKFYDITSNSNTVQL 160
            EKF +++SNS T+ L
Sbjct: 1497 EKFIEVSSNSITLHL 1511


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 250 PDLTEKLLEEVSEKIAQVMNTD 271
           PD+ E++ EE+ E  +     D
Sbjct: 16  PDIQERIFEEIEETFSDDTKPD 37


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.128    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,197
Number of Sequences: 317
Number of extensions: 2230
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 272
length of database: 114,650
effective HSP length: 56
effective length of query: 216
effective length of database: 96,898
effective search space: 20929968
effective search space used: 20929968
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 42 (21.0 bits)