GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001795-TA|BGIBMGA001795-PA|IPR006629|LPS-induced tumor
necrosis factor alpha factor
         (383 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    33   0.017
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    29   0.16 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.21 
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           28   0.37 
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           28   0.37 
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    28   0.50 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.65 
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    27   1.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   1.5  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    26   2.0  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    26   2.0  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           26   2.0  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           25   3.5  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   3.5  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    24   6.1  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    24   8.1  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   8.1  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   8.1  

>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 32.7 bits (71), Expect = 0.017
 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 16/93 (17%)

Query: 211 PAPTPNSPVSAGTSINSTPSSRFPDGYHLNRATPETSL----PSPLPVTAFPEPPPAYTE 266
           PAPTP +        N  PSS     Y L RA+           P+P+ ++P PPP  TE
Sbjct: 597 PAPTPRN--------NYKPSSAAAAPYVLPRASEVNDFFYGASEPVPLASWPLPPPYITE 648

Query: 267 IDATPS---PLSTP-PHPQDSTPPRTQVITATP 295
               P+   P S   P  + +TP  T   TA+P
Sbjct: 649 PVEGPAKKEPESVVYPIYRRTTPTTTTTTTASP 681



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 31/126 (24%), Positives = 42/126 (33%), Gaps = 11/126 (8%)

Query: 211 PAPTPNSPVSAGTSINSTPSSRFPDGYHLNRATPETSLPSPLPVTA----FPEPPPAYTE 266
           P P    PV  G +     S  +P        T  T+  SP P  A    F +  P++  
Sbjct: 642 PPPYITEPVE-GPAKKEPESVVYPIYRRTTPTTTTTTTASPAPAPAIRSRFGDNRPSWRP 700

Query: 267 I-----DATPSPLSTPPHPQDSTPPRTQVITATPISGDIANSSRKYLDCHH-CGMRVHTL 320
           +       T +P +TPP    ST PR            +     +  D    CG R    
Sbjct: 701 LIVPHATTTKTPTTTPPATTTSTTPRDPCYGKFNCGNGVCIDEAEVCDGRDGCGNRADEQ 760

Query: 321 VVREIG 326
           V   IG
Sbjct: 761 VCDHIG 766



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 242 ATPETSLPSPLPVTAFPEPPPAYTEIDATPSPLSTPPHPQDSTPPR 287
           A+  TS   P  + A  +P PA         P  T P PQ  TPPR
Sbjct: 359 ASGPTSHYYPSHIPAGSQPVPAVVNPHQQSRP--TIPAPQQQTPPR 402


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 29.5 bits (63), Expect = 0.16
 Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 5/99 (5%)

Query: 195 PAPERPTTLE-INRILRPAPTPNSPVSAGTSINSTPSSRFPDGYHLNRATPETSLPSPLP 253
           P  +  TTL      LRP  T  +     T+  +T +++FP        T   + PS   
Sbjct: 93  PGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTKFP----TTTTTSAPTTPSQWT 148

Query: 254 VTAFPEPPPAYTEIDATPSPLSTPPHPQDSTPPRTQVIT 292
                   P +T+     +P +T        PP T   T
Sbjct: 149 DPTITTTTPVWTDPTTWSAPTTTTTWSDQPPPPTTTTTT 187



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 177 SIGSETDSASGQSSSVRRPAPERPTTLEINRILRPAPTPNSPVSAGTSINSTPSSRFPDG 236
           S G +T +    +++  RP     T            T   P +  TS  +TP S++ D 
Sbjct: 92  SPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTKFPTTTTTSAPTTP-SQWTDP 150

Query: 237 YHLNRATP----ETSLPSPLPVTAFPE--PPPAYTEIDATPSPLST 276
             +   TP     T+  +P   T + +  PPP  T       P +T
Sbjct: 151 -TITTTTPVWTDPTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTAT 195


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.1 bits (62), Expect = 0.21
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 234 PDGYHLNRATPETSLPSPLPVTAFPEPPPAYTEIDATPSPLSTPPHPQDSTPPRTQ 289
           P+ +  +  + +   P P  + A P P P+   +   PS + T P  + S PP T+
Sbjct: 60  PNLFAPSAVSSQLQRPQPTVLAASPAPQPSLAPV--VPSSVVTAPPARPSQPPTTR 113



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 4/50 (8%)

Query: 224 SINSTPSSRFPDGYHLNRATPETSLPSPLPVTAFPEPPPAYTEIDATPSP 273
           +I+S   SR       N  TPET    PL      E P    ++   PSP
Sbjct: 612 NISSESRSRSTSKQRANAKTPETPSDQPL----IKEVPMNKIQVGGAPSP 657


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 0.37
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 10/116 (8%)

Query: 177 SIGSETDSASGQSSSVRRPAPERPTTLEINRILRPAPTPNSPVSAGTSINSTPSSRFPDG 236
           S G +T +    +++  RP     T            T   P +  TS  +TP S++ D 
Sbjct: 92  SPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP-SQWTDP 150

Query: 237 YHLNRATP----ETSLPSPLPVTAFPEPPPAYTEIDAT----PSPLSTPPHPQDST 284
             +   TP     T+  +P   T + + PP  T    T    P+  +T P P  +T
Sbjct: 151 -TITTTTPIWTDPTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTT 205


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 0.37
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 10/116 (8%)

Query: 177 SIGSETDSASGQSSSVRRPAPERPTTLEINRILRPAPTPNSPVSAGTSINSTPSSRFPDG 236
           S G +T +    +++  RP     T            T   P +  TS  +TP S++ D 
Sbjct: 92  SPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP-SQWTDP 150

Query: 237 YHLNRATP----ETSLPSPLPVTAFPEPPPAYTEIDAT----PSPLSTPPHPQDST 284
             +   TP     T+  +P   T + + PP  T    T    P+  +T P P  +T
Sbjct: 151 -TITTTTPIWTDPTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTT 205


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.50
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 246 TSLPS-PLPVTAFPEPPPAYTEIDATPSPLSTPPHPQDSTPPRTQVITATPISGDIANS 303
           TS PS P P+   P  P   +   A     S P  P+   PP+    +A+P+    A+S
Sbjct: 49  TSYPSLPAPIVPSPGAPIQQSRPQAVTVRSSAPMLPKGGLPPKGVPSSASPVYMSPASS 107



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 213 PTPNS-PVSAGTSINSTPSSRFPDGYHLNRATPETSLPSPLPVTAF 257
           P P   P +AG  + + P   +P GY  N     TS    LP T F
Sbjct: 336 PRPRRYPTNAGHKVMNAPKEYYPVGYDKNFDDNFTS-KVDLPYTTF 380


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 27.5 bits (58), Expect = 0.65
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 229  PSSRFPDGYHLNRATPETSLPSPLPVTAFPEP-PPAYTEIDATPSPLSTPPHPQDSTPPR 287
            P +  PD + L  A P    PSPL   A P+P   +   I A  S LS P  P  + P R
Sbjct: 1268 PDTAVPDPHSLY-AIPNKVKPSPLAGAAVPKPMDRSLRSILAEQSELS-PIKPCQTNPFR 1325

Query: 288  T 288
            T
Sbjct: 1326 T 1326


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 15/102 (14%)

Query: 211 PAPTPNSPVSAGTSINSTPSSRFPDGYHLNRATPETSL----PSPLPVTAFPEPPPAYTE 266
           PAPTP +        N  PSS     Y L RA+           P+P+ ++  PPP  TE
Sbjct: 598 PAPTPRN--------NYKPSSAAAAPYVLPRASEVNDFFYGGLEPVPLASWQLPPPYVTE 649

Query: 267 IDATPS---PLSTPPHPQDSTPPRTQVITATPISGDIANSSR 305
               P+   P S        T P T   T   ++   A SSR
Sbjct: 650 PVEGPAKKEPESVVYPIYRRTTPTTTTTTTASLAPAPAISSR 691



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 242 ATPETSLPSPLPVTAFPEPPPAYTEIDATPSPLSTPPHPQDSTPPR 287
           A+  TS   P  + A  +P PA         P  T P PQ  TPPR
Sbjct: 360 ASGPTSHYYPSHIPAGSQPVPAVVNPQQPSRP--TIPAPQQQTPPR 403



 Score = 25.0 bits (52), Expect = 3.5
 Identities = 37/136 (27%), Positives = 48/136 (35%), Gaps = 20/136 (14%)

Query: 192 VRRPAPERPTTLEINRILRPAPTPNSPVSAGTSINSTPSSRFPDGYHLNRATPETSLPSP 251
           V  PA + P ++      R  PT  +  +A  +     SSRF D    NR       PS 
Sbjct: 651 VEGPAKKEPESVVYPIYRRTTPTTTTTTTASLAPAPAISSRFGD----NR-------PSW 699

Query: 252 LPVTAFPEPPPAYTEIDATPSPLSTPPHPQDSTPPRTQVITATPISGDIANSSRKYLDCH 311
            P+      P A T    T +P +TPP    ST PR            +     +  D  
Sbjct: 700 RPLIV----PHATT----TKTPTTTPPATTTSTTPRDPCYGKFNCGNGVCIDEAEVCDGR 751

Query: 312 H-CGMRVHTLVVREIG 326
             CG R    V   IG
Sbjct: 752 DGCGNRADEQVCDHIG 767


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 9/94 (9%)

Query: 211 PAPTPNS-PVSAGTSINSTPSSRFPDGYHLNRATPETSLPSPLPVTAFPEPPPAYTEIDA 269
           P P   S  +SAG S  +  SS    G+HL   +P   L SP         P A T   +
Sbjct: 685 PPPAHGSLNLSAGGSPVAVVSSSPTGGHHLASPSPHHHLTSP------HGAPLALTSSKS 738

Query: 270 TPSPLSTPPHPQDSTPPRTQVITATPISGDIANS 303
             +  S  PHP     P + ++  +   G  +N+
Sbjct: 739 ASTHPS--PHPATRASPSSPIVATSSSGGGGSNT 770


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 15/46 (32%), Positives = 19/46 (41%)

Query: 243 TPETSLPSPLPVTAFPEPPPAYTEIDATPSPLSTPPHPQDSTPPRT 288
           TP   + SP  +     PP  Y+ I      LS    P+DS  P T
Sbjct: 217 TPSPEVFSPKKMENIESPPSIYSGIIKHDDELSFVSSPKDSVFPET 262


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 12/35 (34%), Positives = 14/35 (40%)

Query: 261 PPAYTEIDATPSPLSTPPHPQDSTPPRTQVITATP 295
           P AYT       P  T PH    T P +  + A P
Sbjct: 167 PNAYTNTTIAVQPAPTQPHELVGTDPLSSPLQAAP 201


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 275 STPPHPQDSTPPRTQVITATPISGDIANSSRKYLDCHH 312
           +TP  P  S PP T   T  P     A S+++    HH
Sbjct: 80  ATPQPPAASMPPSTTTNTQIPSMVSAAGSTQQQHQQHH 117



 Score = 23.8 bits (49), Expect = 8.1
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 240 NRATPETSLPSPLPVTAFPEPPPAYTEIDATPSPLSTP 277
           N A P T+ P+   VTA    PPA +   +T +    P
Sbjct: 63  NTAAPGTAGPNAATVTAATPQPPAASMPPSTTTNTQIP 100


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 9/115 (7%)

Query: 177 SIGSETDSASGQSSSVRRPAPERPTTLEINRILRPAPTPNSPVSAGTSINSTPSSRFPDG 236
           S G +T +    +++  RP     T            T   P +  TS  +TP S++ D 
Sbjct: 92  SPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP-SQWTDP 150

Query: 237 YHLNRATP----ETSLPSPLPVTAF---PEPPPAYTEIDATPSPLSTPPHPQDST 284
             +   TP     T+  +P   T +   P PP   T    T S  +T  H   +T
Sbjct: 151 -TITTTTPIWTDPTTWSAPTTTTTWSDQPRPPTTTTTTVWTDSTATTTTHAPTTT 204


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 177 SIGSETDSASGQSSSVRRPAPERPTTLEINRILRPAPTPNSPVSAGTSINSTPSSRFPDG 236
           S G +T +    +++  RP     T            T   P +  TS  +TP S++ D 
Sbjct: 92  SPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP-SQWTDP 150

Query: 237 YHLNRATP----ETSLPSPLPVTAFPEPPPAYTEIDATPSPLSTPPHPQDSTPPRTQVIT 292
             +   TP     T+  +P   T + + PP  T    T + + T      +TP  T   T
Sbjct: 151 -TITTTTPIWTDPTTWSAPTTTTTWSDQPPPPT---TTTTTVWTDSTATTTTPASTTTTT 206


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 200 PTTLEINRILRPAPTPNS-----PVSAGTSINSTPSSRFPDGYHLNRATPETSLPSPLPV 254
           P   E +R  RP P         P +AG  + + P   +P GY  N     TS    LP 
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRRYPTNAGHKVMNAPKEYYPVGYDKNFDDNFTS-KVDLPY 385

Query: 255 TAF 257
           T F
Sbjct: 386 TTF 388


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query: 239 LNRATPETSLPSPLPVTAFPE 259
           L+R  P TSL  PLP   FP+
Sbjct: 254 LSRVRPLTSLREPLPEGYFPK 274


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 267 IDATPSPLSTPPHPQDSTPPRTQVITATPISGDIANS 303
           + ATP P +T    ++S PP+ +      +  +  +S
Sbjct: 35  VPATPEPSTTEATEEESPPPKIECTDPREVYNECGSS 71


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 9/115 (7%)

Query: 177 SIGSETDSASGQSSSVRRPAPERPTTLEINRILRPAPTPNSPVSAGTSINSTPSSRFPDG 236
           S G +T +    +++  RP     T            T   P +  TS  +TP S++ D 
Sbjct: 92  SPGDQTTTTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTP-SQWTDP 150

Query: 237 YHLNRATP----ETSLPSPLPVTAF---PEPPPAYTEIDATPSPLSTPPHPQDST 284
             +   TP     T+  +P   T +   P PP   T    T    +T  H   +T
Sbjct: 151 -TITTTTPIWTDPTTWSAPTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTT 204


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 8.1
 Identities = 15/51 (29%), Positives = 19/51 (37%)

Query: 185 ASGQSSSVRRPAPERPTTLEINRILRPAPTPNSPVSAGTSINSTPSSRFPD 235
           A     ++R    E P T    +  R A TP     A  + N  PS   PD
Sbjct: 162 AERAEKALREVQSEPPETPMTGKRSRKARTPEEAEDAKRAKNDAPSCNRPD 212


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.132    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,054
Number of Sequences: 2123
Number of extensions: 16817
Number of successful extensions: 58
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 38
Number of HSP's gapped (non-prelim): 31
length of query: 383
length of database: 516,269
effective HSP length: 65
effective length of query: 318
effective length of database: 378,274
effective search space: 120291132
effective search space used: 120291132
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)