GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001794-TA|BGIBMGA001794-PA|IPR002110|Ankyrin
         (684 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       26   0.75 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   5.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   5.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 26.2 bits (55), Expect = 0.75
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 307 TPPRSENVPSPISESQTSYYPSNSDYTLSPELSPVYCSDYEKYQDLTSYEECPNETDKTR 366
           TPP SE + SP SE +     +      SP   P    D+ +  ++ S E+    + KT 
Sbjct: 107 TPPNSEPLVSPKSEKEEKDMETTLTPCASPNRKPDDNQDHLRRLEM-SLEKSGLFSSKTS 165

Query: 367 ERSTSICSMK 376
           E S    S K
Sbjct: 166 EHSVDELSGK 175


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 541 GDAYALVLSEITRNEYREQPPLFNV 565
           GDAYA++ S + +N Y+  P + ++
Sbjct: 255 GDAYAVLNSVLFQNVYKPLPIVLSI 279


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 541 GDAYALVLSEITRNEYREQPPLFNV 565
           GDAYA++ S + +N Y+  P + ++
Sbjct: 255 GDAYAVLNSVLFQNVYKPLPIVLSI 279


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.131    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,252
Number of Sequences: 317
Number of extensions: 6518
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 3
length of query: 684
length of database: 114,650
effective HSP length: 61
effective length of query: 623
effective length of database: 95,313
effective search space: 59379999
effective search space used: 59379999
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)