Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001794-TA|BGIBMGA001794-PA|IPR002110|Ankyrin
(684 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 34 0.075
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 32 0.23
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 32 0.23
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 32 0.30
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 31 0.53
SPBC1685.11 |rlp1||RecA family ATPase Rlp1|Schizosaccharomyces p... 30 0.92
SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces ... 30 0.92
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.92
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 30 1.2
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 30 1.2
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 29 1.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.6
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 29 1.6
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 29 2.1
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 29 2.1
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 29 2.1
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 29 2.8
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 28 3.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 3.7
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 28 3.7
SPAC105.02c |||ankyrin repeat protein, unknown biological role|S... 28 4.9
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 28 4.9
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 28 4.9
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 27 6.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 6.5
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 27 6.5
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch... 27 6.5
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 27 8.6
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 33.9 bits (74), Expect = 0.075
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 243 SEFFPANQQFYEPIAIVPTSTPEANPIEEFSCANHLNYEDSVDVTSILNLDHMKDLSPAS 302
S F ++ FY +++PTS P + + F+ +N +Y ++ ++ ++ + + ++
Sbjct: 339 SATFTSSPPFYSNSSVIPTSVPSS--VSSFTSSNS-SYTTTLTASNT-SITYTGTGTGSA 394
Query: 303 NIFPTPPRSEN---VPSPISESQTSYYPSNSDYT 333
+PP N +P+ + S +S+ SNS YT
Sbjct: 395 TFTSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYT 428
Score = 30.3 bits (65), Expect = 0.92
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 243 SEFFPANQQFYEPIAIVPTSTPEANPIEEFSCANHLNYEDSVDVTSILNLDHMKDLSPAS 302
S F ++ FY +++PTS P + + F+ +N +Y ++ ++ + + ++
Sbjct: 393 SATFTSSPPFYSNSSVIPTSVPSS--VSSFTSSNS-SYTTTLTASNT-TVTFTGTGTGSA 448
Query: 303 NIFPTPPRSEN---VPSPISESQTSYYPSNSDYT 333
+PP N +P+ S +S+ SNS YT
Sbjct: 449 TFTSSPPFYSNSSVIPTSAPSSVSSFTSSNSSYT 482
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 248 ANQQFYEPIAIVPTSTPEANPIEEFSCANHLNYEDSVDVTSILNLDHMKDLSPASNIFPT 307
++ FY +++PTS P + + F+ ++ +Y ++ ++ ++ + + ++ +
Sbjct: 290 SSSPFYSNSSVIPTSVPSS--VSSFTSSSS-SYTTTLTASNT-SVTYTGTGTGSATFTSS 345
Query: 308 PPRSEN---VPSPISESQTSYYPSNSDYT 333
PP N +P+ + S +S+ SNS YT
Sbjct: 346 PPFYSNSSVIPTSVPSSVSSFTSSNSSYT 374
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 32.3 bits (70), Expect = 0.23
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 277 HLNYEDSVDVTSILNLDHMKDLSPASN-IFPTPPRSENVPSPISESQTSYYPSN 329
+LN S D+ S+LN+ +D+ P SN +F N+ SPI S + + SN
Sbjct: 522 NLNLPVSSDLDSVLNIPPNEDVFPDSNPVFDEFTNISNLTSPIEASNGNTFGSN 575
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 32.3 bits (70), Expect = 0.23
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 565 VNHVNCDGQAALHLSCSLHSKQSPRIHVTHVLLEHSGADLQQGDSKGGDTPIHLAVNSIN 624
+N + G+ LH++ S +K S LL+H G D+ D + G T +H A+ N
Sbjct: 45 INQKDRYGRTVLHIAVS-ENKNS----FVRSLLQHKGIDVFVQDEESGYTALHRAIYVGN 99
Query: 625 CDLHLVLLLFKTVDRKSWKNLAYLRNRSFVSPFDYARSAAKST 667
+ LLL K +S + ++++ +SPF + ST
Sbjct: 100 LEA-ASLLLSKDPSFRSLR----IKDKEGLSPFQFLSRVLSST 137
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 31.9 bits (69), Expect = 0.30
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 147 IVVLARKPPKEKVYCRVAKPYDAEDFYRQIKQINRKTLTGGQVLVNSIQTDNYSEV 202
+V L +K ++KV + DAE FYR +K + +TG L S++ D++ EV
Sbjct: 544 VVSLYKKLLRKKVSLADMESIDAE-FYRSLKWVLENDITGILDLTFSVEEDHFGEV 598
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 248 ANQQFYEPIAIVPTS---TPEANPIEEFSCANHLNYEDSVDVTSILNLDHM 295
A Q EPI IV S P +EE S A H++Y + + ++N DH+
Sbjct: 389 AKQITNEPIEIVSLSGQKIPRRMAVEELSFAAHVDYLQNSEFIDLVNADHI 439
>SPBC1685.11 |rlp1||RecA family ATPase Rlp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 30.3 bits (65), Expect = 0.92
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 159 VYCRVAKPYDAEDFYRQIKQINRKTLTGGQVLVNSIQTDNYSEVDRALNSVKEIAQTSQQ 218
V+ + A D D +N +L+ G+ ++ + + E +R + + E A ++
Sbjct: 121 VHLQNAAREDGTDEDINSNSVNDVSLSSGETMLQFPEHEEQHECNREMEQLYESASSTVY 180
Query: 219 EQGYWEDVQDMID 231
+WED + ID
Sbjct: 181 PCSFWEDAERKID 193
>SPBC1703.02 |rsc9||RSC complex subunit Rsc9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 780
Score = 30.3 bits (65), Expect = 0.92
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 325 YYPSNSDYTLSPELSPVYCSDYEKYQ 350
+ PS+ DY L ++ +YCSD E+ Q
Sbjct: 538 FEPSSDDYVLQTDIWQLYCSDMERAQ 563
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.92
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 174 RQIKQINRKTLTGGQVLVNSIQTDNYSEVDRAL---NSVKEIAQTSQQEQGYWEDVQDMI 230
R+++Q N+ L+ L + ++ D ++D A ++ + +T Q E+V D +
Sbjct: 564 RELQQQNQNLLSAVHELADRMEKDEKPDLDGAEIQEETLIKANETIDQLTKMLEEVSDQL 623
Query: 231 DGDYHSKESDILSEFFPANQQFYEPIAIVPTSTPEANPIEEFS 273
Y KE D N++ + P S N IE+ S
Sbjct: 624 R--YSLKERDFFRSLVQENEKLLDMAPATPNSKLNTNLIEQTS 664
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 633 LFKTVDRKSWKNLAYLRNRSFVSPFDYARSAAKSTTRQNYPPEILDF 679
L K +D KS KN AYL +R+F++ + SAAK R+ Y ++++
Sbjct: 274 LVKELD-KSIKNFAYLEHRTFLT---ISNSAAKDMKREIYEKSLVNW 316
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 297 DLSPASNIFPTPPRSENVP-SPISESQTSYYPSNSD---YTLSPELSPVYCSDYEKYQDL 352
++S S+ FPTP S +VP E + SY +++ Y SP + P Y +Q
Sbjct: 318 NISSPSSRFPTP-YSPSVPFGTYQEKEKSYSQDHAELSYYQQSPSMMPPYDRSSVYFQQP 376
Query: 353 TSYEECPNET 362
S + PN++
Sbjct: 377 LSRTDVPNQS 386
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 337 ELSPVYCSDYEKYQDLTSYEECPNETDKTRERSTSICSMKMKQFKDLQKE 386
E +Y SD +K +DL Y PNE K ++ +T + + +F+D+ ++
Sbjct: 1408 ERQNLYYSDNQKLEDLLFYASYPNE--KLKDWATDGINAILSRFEDVSRD 1455
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/92 (19%), Positives = 36/92 (39%)
Query: 55 QAQNEDKPNPVEKILENLQKLEIAKENTRXXXXXXXXXXXXXXXIEEDRRSERVDSHSSE 114
+A+ P P +K ++ +K + +E++ E + S +S SSE
Sbjct: 57 EAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSE 116
Query: 115 DSGFVDTKEVVEGLKCLKIEKDEVKSGEKKKQ 146
S +EV+ + K E S + ++
Sbjct: 117 SSSSESEEEVIVKTEEKKESSSESSSSSESEE 148
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 265 EANPIEEFSCANHLNYEDSVDVTSILNLDHMKDLSPA--SNIFPTPPRSENVPSPISESQ 322
EA + E A L VD +I LD +SP+ SN+ P S ++P PI +
Sbjct: 91 EAFRMAEQPPAEALTISTPVDPINIDELDRAYAVSPSDTSNLLHPPTSSSSIPIPIKNAG 150
Query: 323 TSYYPSNSDYTLSPEL 338
SN D+ + P L
Sbjct: 151 ----HSNLDHPIRPSL 162
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 288 SILNLDHMKDLSPASNIFPTPPRSENVPSPISESQ 322
S LN + +K P SN+ SENVP P +E+Q
Sbjct: 240 SSLNSNIVKPPLPPSNVQSNSSSSENVPKPNAETQ 274
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 312 ENVPSPISESQTSYYPSNSDYTLSPELSPVYCS---DYEKYQDLTSYEECPNETDKTR 366
EN+ ISE+ +S P +++ SP LS + S DY K T N ++TR
Sbjct: 7 ENISKQISENNSSTNPKHANSESSPLLSSDFSSSSKDYHKVGAFTDNTNAINIPEQTR 64
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 170 EDFYRQIKQINRKTLTGGQVLVN-SIQTDNYSEVDRALNSVKEIAQTSQQEQGYWEDVQD 228
E+F + Q+ K +L N S+ ++ L V E+ +E+G+ E ++D
Sbjct: 433 EEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDLKTCLQDVDELVDIIGEEKGHGESIRD 492
Query: 229 MIDGDYHSKESDILSEFFPANQQFYEPIAI 258
DY+ K ++ +++ E + I
Sbjct: 493 KSMNDYYVKNMVRKAQVLEQLEKYQESLNI 522
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 28.7 bits (61), Expect = 2.8
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Query: 247 PANQQFYEPIAIVPTSTPEANPIEEFSCANHLNYEDSVDVTSILNLDHMKDLSPASNIFP 306
P Q YE +I +S+ + E S + + S V N DH + S +S++
Sbjct: 141 PFVSQDYEKESI--SSSQFSKKYSEGSLKSQQSNTRSNSVHEKQNTDHASNASSSSSVVS 198
Query: 307 TPPRSENVPSPISESQTSYYPSNSDYTLSPELSPVYCSDYEKYQDLTSYEE--CPNETDK 364
+P N SP+ Q + P ++ L+ V + +E + S E P + +
Sbjct: 199 SPSLKPNNTSPLKLFQGASDPFTREH-LNQLTQDVKSNSFENGEKQFSLPEPRRPQKPMR 257
Query: 365 TRERSTSICSMKMKQ 379
T ER S+ + + Q
Sbjct: 258 TTERKASLNTKDLYQ 272
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 299 SPASNIFPTPPRSENVP---SPISESQTSYYPSNSDYTLSPELSPVYCSDYEKYQDLTSY 355
+PAS+ R +VP SP+ S Y + T SP +P ++ + +S+
Sbjct: 262 TPASSSSSAKARPVSVPDMSSPVPASSVEYESLKAAVTYSPSQNPKKVAETDSESRKSSF 321
Query: 356 EECPNETDK 364
+ N+ D+
Sbjct: 322 QSSYNDADR 330
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 28.3 bits (60), Expect = 3.7
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Query: 281 EDSVDVTSILNLD-HMKDLSPASNIFPTPPRSENVPSPISESQTSYYPSNSDYTLSPELS 339
E++ D + + N D LSP ++FP P EN+ S ++ S+ P +
Sbjct: 432 ENNKDTSKLENPDISSSPLSPTEDLFPNDPEEENLFSAALGLNSNTGSQPSETQSKPSID 491
Query: 340 PVYCSDYEKYQDLTSYEECPN 360
P QD + + N
Sbjct: 492 PSESITVTDNQDSLLFSQLTN 512
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 28.3 bits (60), Expect = 3.7
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 126 EGLKCLKIEKDEVKSGEKKKQIVVLARKPPKEKVYCRVAKPYDAEDFYRQIKQINRKTLT 185
E L+C+ + + + +GE K + A K R+ + EDF +KQI ++ LT
Sbjct: 7 EALRCIGLARKYLNAGEYDKALK-FANKS------LRIHATTEGEDF---VKQIEKQKLT 56
Query: 186 GGQVLVNSIQTDNYSEVDRALNSVKEIAQTSQQEQGY-WEDVQDMI 230
G + + +N S SV+E +S E+ W Q ++
Sbjct: 57 GSPNPQATPKQENKSNFFSEKQSVRENGNSSAGEKKQKWTSEQHLL 102
>SPAC105.02c |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 170
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 596 LLEHSGADLQQGDSKGGDTPIHLAVNSINCDLHLVL 631
LL+ SG +L GDTP+H AV I D L
Sbjct: 66 LLDISGVNLNNRCRMTGDTPLHFAVMFIKKDQETAL 101
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.9 bits (59), Expect = 4.9
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 17/107 (15%)
Query: 285 DVTSILNLDHMKDLSPASNIFPTPPRSEN-VPSPISESQTSYYPSNSDYTLSPELSPVYC 343
DVTS LD D + + P EN V S E+ S Y +SD
Sbjct: 562 DVTSSQRLD---DENGFLTLLEPPVNYENEVESSSGENIVSMYTGHSDLN---------- 608
Query: 344 SDYEKYQDLTSYEECPNETDKTRERST---SICSMKMKQFKDLQKEI 387
D + YQD SY ++ D++ E S ++ S++MK+ K ++ +
Sbjct: 609 DDDDDYQDEESYSYASDDDDESDEDSDEGPTLLSLRMKKRKAVEPNV 655
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 344 SDYEKYQDLTSYEECPNETDKTRERSTSICSMKMKQFKDLQKEIAAGFSKMECCEIMRKS 403
+++ + + + C ++ D + S CS + K +K K CC + S
Sbjct: 211 TEHAELKSVNEGSSCCSKKDSSPSEKPSCCSQEKKSCCSSKKPSCCSQEKKGCCSTEKTS 270
Query: 404 C 404
C
Sbjct: 271 C 271
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 276 NHL-NYEDSVDVTSILNLDHMKDLSPASNIFPTPPRSENVPSPISESQTSYYPSNSDYTL 334
+HL N++D D +S+L L S F S + P S S Y S+ D +L
Sbjct: 66 SHLQNFQDQFDYSSVLKTPFNPLLEANSAYF----LSNQISLPDSHS----YASSFDASL 117
Query: 335 SPELSPVYC 343
SP SP+ C
Sbjct: 118 SPPSSPLTC 126
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 6.5
Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 4/105 (3%)
Query: 275 ANHLNYEDSVDVTSILNLDHMKDLSPASNIFPTPPRSENVPSPISESQTSYYPSNSDYTL 334
+N S TS + L P+S TP S N + S S T NS T
Sbjct: 258 SNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTT 317
Query: 335 SPELSPVYCSDYEKYQDLTSYEECP----NETDKTRERSTSICSM 375
S +P+ TS P N T T ST + S+
Sbjct: 318 SASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSV 362
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 256 IAIVPTSTPEANPIEEFSCANHLNYEDSVDVTSILNLDHMKDLSPASNIFPTPPRSENVP 315
+ ++P T + NP+ E C N L + VD+ N K + + T + E +
Sbjct: 153 LQVLPEGTAKINPLHENYCLNSLRKDQYVDLAIQFNSTIPKYIQYSHVDLET--KEETLV 210
Query: 316 SPISESQTSYYPSNSDYTLSPELSPVY 342
S S+S P L +Y
Sbjct: 211 EVSGRSLRKLLSSSSKNPKEPRLQTIY 237
>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
Spo14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/37 (27%), Positives = 25/37 (67%)
Query: 629 LVLLLFKTVDRKSWKNLAYLRNRSFVSPFDYARSAAK 665
LV +L+ V+R + + +++L N+S V+ ++Y + + +
Sbjct: 194 LVQVLYMPVERATVRGVSFLPNQSIVAAYNYIKDSKR 230
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 99 IEEDRRSERVDSHSSEDSGFVDTKEVVEGLKCLKIEKDEVKSGEKKKQIVVLARKPPKE 157
I++D++ E+ + S+++ ++ +GL+ K EK K + KK K PKE
Sbjct: 213 IKKDKK-EKKEGKPSQEASVKSVEKAPKGLEGAKKEKQNKKEKKDKKDKKDKKEKAPKE 270
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.131 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,102,859
Number of Sequences: 5004
Number of extensions: 134007
Number of successful extensions: 469
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 438
Number of HSP's gapped (non-prelim): 48
length of query: 684
length of database: 2,362,478
effective HSP length: 78
effective length of query: 606
effective length of database: 1,972,166
effective search space: 1195132596
effective search space used: 1195132596
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -