Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001794-TA|BGIBMGA001794-PA|IPR002110|Ankyrin
(684 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 35 0.25
08_02_1416 - 26915306-26915459,26915553-26915668,26915798-269159... 34 0.33
12_01_0774 + 7063465-7064011,7065183-7065791,7067905-7068464,706... 33 0.57
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 33 0.57
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 33 0.57
02_02_0371 - 9513742-9514293,9514784-9514923,9515217-9515556,951... 33 1.00
07_03_1182 - 24610862-24611637,24612223-24612340,24612441-246141... 32 1.3
01_07_0176 - 41733845-41734834,41736058-41736588 32 1.3
03_05_0441 + 24350026-24350081,24350186-24351011,24351088-243511... 32 1.7
08_02_0199 - 14160881-14161054,14161151-14161306,14161802-141619... 31 2.3
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 31 3.0
11_06_0346 - 22549699-22549721,22549857-22549999,22550100-225521... 31 4.0
06_02_0023 + 10702040-10702364,10702530-10702747,10703643-107041... 31 4.0
02_04_0353 + 22287313-22287448,22287573-22287702,22288605-22289367 31 4.0
01_06_1268 - 35878520-35879353,35879920-35880332,35881109-358815... 31 4.0
01_01_0499 - 3675303-3675484,3676888-3676982,3677046-3677096,367... 31 4.0
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 30 5.3
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 30 5.3
08_02_1512 + 27627740-27629009,27629111-27629256,27629842-276301... 30 7.0
07_03_1685 + 28645284-28645454,28645681-28647069 30 7.0
06_01_0924 - 7131937-7132041,7132309-7132407,7132498-7132596,713... 30 7.0
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 30 7.0
02_05_1272 + 35373843-35374031,35374343-35374490,35374586-353747... 30 7.0
02_03_0291 - 17345049-17345088,17345137-17345169,17345332-173454... 30 7.0
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 29 9.3
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 29 9.3
03_06_0555 - 34693067-34693196,34693450-34693688,34693956-346940... 29 9.3
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 34.7 bits (76), Expect = 0.25
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 259 VPTSTPEANPIEEFSCANHLNYEDSVDVTSILNLDHMKDLSPASNIF-PTPPRSENVPSP 317
VPTS P + +S + + Y S + S +L + SP S ++ PT P S
Sbjct: 1635 VPTSLPHSPTSPIYSATSPI-YSPSSPIYSPTSLSY----SPTSPVYSPTSPVYNPTSSA 1689
Query: 318 ISESQTSYYPSNSDYTLSPELSPVYCSDYEKY 349
S + SY P++ Y+ SP SP Y Y
Sbjct: 1690 YSPTSPSYNPTSPSYSYSP-TSPSYSPTSPSY 1720
>08_02_1416 -
26915306-26915459,26915553-26915668,26915798-26915910,
26915995-26916130,26916219-26916338,26916472-26916648,
26916790-26916862,26916948-26917083,26917179-26918055,
26918138-26918331,26918438-26918620,26918730-26918796,
26918900-26919092,26919317-26919363,26919478-26919574,
26919663-26919790,26919905-26920009,26920763-26920879
Length = 1010
Score = 34.3 bits (75), Expect = 0.33
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 254 EPIAIVPTSTPEANPIEEFSCANHLNYEDSVDVTSILNLDHM--KDLSPASNIFPTPPRS 311
+P+ + S N E CA Y +S ++ NL M K +S A N++ +P R+
Sbjct: 860 KPLLVELGSGTSPNKKNEEKCAADGPYPESPRLSRFPNLPDMSPKKVSAAHNVYVSPLRT 919
Query: 312 ENVPSPISESQTSYY 326
+ + +S S SYY
Sbjct: 920 SKMDTLLSPSSKSYY 934
>12_01_0774 +
7063465-7064011,7065183-7065791,7067905-7068464,
7069411-7069530
Length = 611
Score = 33.5 bits (73), Expect = 0.57
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 572 GQAALHLSCSLHSKQSPRIHVTHVLLEHSGADLQQGDSKGGDTPIHLAVN 621
G+ LH++C+ Q P + +V+ DL K G+TP+HLA N
Sbjct: 484 GRTFLHIACADEGWQRPTVR--YVVKNPMLHDLLNSQDKEGNTPLHLAAN 531
Score = 30.3 bits (65), Expect = 5.3
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 515 LYAGKDCIFTEVDAQGDTLVTACARAGDAYAL--VLSEITRN-EYREQPPLFNVNHV-NC 570
LY + + + ++++G+T + ARAG +A+ +++ + N E + L ++ NC
Sbjct: 240 LYKARWHLLSSLNSEGETPLHRAARAGHVHAVQRIIAGVKENLEKLAENQLMDIIATRNC 299
Query: 571 DGQAALHLS 579
G+ ALHL+
Sbjct: 300 AGENALHLA 308
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 33.5 bits (73), Expect = 0.57
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 237 KESDILSEFFPANQQFYEPIAIVPTSTPEANPIEEFSCANHLNYEDSVDVTSILNLDHMK 296
+E ++ E FPA + + P + A+ +E C H +Y D+V V S L +H
Sbjct: 24 REQQVVEEKFPAAAAAMREMVLPPVAAAAADSEQEQLCYVHCHYCDTVLVVSDLRSNHAH 83
Query: 297 DLS 299
LS
Sbjct: 84 FLS 86
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 33.5 bits (73), Expect = 0.57
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 367 ERSTSICSMKMKQFKDLQKEIAAGFSKMEC--CEIMRKSCKEI-LQEHLLKLNAELRRKI 423
E+++S+ S +K F EI G K C C ++++ K + +++ L L+R
Sbjct: 251 EQNSSLTSC-LKSF--FSTEILNGEDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFK 307
Query: 424 CVEVTRMNLKTCYGVMHHILLSLSKSGDDEDLQYSLFGLI 463
VE + K Y V++ + L L +D D +YSLF ++
Sbjct: 308 YVEQLSRHKKLSYRVVYPLELKLGSMSEDADCEYSLFAVV 347
>02_02_0371 -
9513742-9514293,9514784-9514923,9515217-9515556,
9515659-9515721,9515812-9515910,9516016-9516126,
9517114-9517257
Length = 482
Score = 32.7 bits (71), Expect = 1.00
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 528 AQGDTLVTACARAGDAYALVLSEITRNEYREQPPLFNVNHVNCDGQAALHLSCSLHSKQS 587
A+ +T + ARAGD L+ + R + +E P L N + Q LH++ ++
Sbjct: 14 AKAET-IHGLARAGD-----LAGVQR-KLQENPALINDRNPVMS-QTPLHVAAGYNNTG- 64
Query: 588 PRIHVTHVLLEHSGADLQQGDSKG--GDTPIHLAVNSINCDLHLVLL 632
+ LL+ G D + ++K G+TP+H+AV + +C+ +LL
Sbjct: 65 ----IVKFLLDFQGTDKVELEAKNMYGETPLHMAVKNSSCESAKLLL 107
>07_03_1182 -
24610862-24611637,24612223-24612340,24612441-24614120,
24614253-24614320,24615370-24615550
Length = 940
Score = 32.3 bits (70), Expect = 1.3
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 312 ENVPSPISESQTSYYPSNSDYTL--SPELSPVYCSDYEKYQDLTSYEECPNETDKTRERS 369
EN PSPIS TSYY + Y+ S C + D T + +E + + +
Sbjct: 659 ENAPSPISVLDTSYYHTRLSYSFKDGETHSSEECWNPNSLPD-TPQSKTSSEVSQIKPEN 717
Query: 370 TSICSMKMKQFKDLQKEIA 388
K++Q + + E+A
Sbjct: 718 FEALIQKLEQLQSMNDEVA 736
>01_07_0176 - 41733845-41734834,41736058-41736588
Length = 506
Score = 32.3 bits (70), Expect = 1.3
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 568 VNCDGQAALHLSCSLHSKQSPRIHVTHVLLEHSGADLQQGDSKGGDTPIHLAVNSINCDL 627
+N D ALH + S++ V LLE AD+ G TP+H+A + D+
Sbjct: 304 LNLDDALALHYAVENCSRE-----VVKALLELGAADVNHPAGPAGKTPLHVAAEMVCPDM 358
Query: 628 HLVLL 632
VLL
Sbjct: 359 VAVLL 363
>03_05_0441 +
24350026-24350081,24350186-24351011,24351088-24351189,
24351278-24351343,24351418-24351483,24351594-24351800,
24351925-24352086
Length = 494
Score = 31.9 bits (69), Expect = 1.7
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 134 EKDEVKSGEKKKQIVVLARKPPKEKVYCRVAKPYDAEDF--YRQIKQINRKTLTGGQVLV 191
E E S + + + LARKPP + R ++ + + R+ +IN K +++
Sbjct: 287 EDSESPSEDAESESAALARKPPAKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELIP 346
Query: 192 NSIQTDNYSEVDRALNSVKEI 212
+ +TD S +D A+ +K +
Sbjct: 347 HCNKTDKASMLDEAIEYLKSL 367
>08_02_0199 -
14160881-14161054,14161151-14161306,14161802-14161921,
14162046-14162143,14162969-14163041,14164472-14164619,
14165108-14165232,14165611-14165652,14165757-14166074,
14166633-14167559,14167584-14167852,14167946-14168255,
14169281-14169465,14170795-14170901,14171320-14171486
Length = 1072
Score = 31.5 bits (68), Expect = 2.3
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 222 YWEDVQDMIDGDYHSKESDILSEFFPAN--QQFYEPIAIVPTSTPEANPIEEFSCANHLN 279
Y ++ DM DG+ +E+D S FPA + E +A +P S EF + +
Sbjct: 507 YEDEDDDMTDGELADEENDDESSAFPAEVVSENEEHMAFLPNSKINMIHSAEFESISSYD 566
Query: 280 YEDSVDVTSILNLDHMKDLSP 300
E ++ + ++ +DL P
Sbjct: 567 EEKDDEIDDHMEDEYNEDLLP 587
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 31.1 bits (67), Expect = 3.0
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 367 ERSTSICSMKMKQFKDLQKEIAAG-FSKMECCEIMRKSCKEILQEHLLKLNAELRRKICV 425
E+++SI S +K F + A F +CC + + +++ L L+R +
Sbjct: 203 EQNSSITSC-LKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHLKRFKYI 261
Query: 426 EVTRMNLKTCYGVMHHILLSLSKSGDDEDLQYSLFGLI 463
E K Y V+ + L L + D+ DL+YSLF ++
Sbjct: 262 EQLGRYKKLSYRVVFPLELKLINTVDNSDLEYSLFAVL 299
>11_06_0346 -
22549699-22549721,22549857-22549999,22550100-22552175,
22552305-22552822
Length = 919
Score = 30.7 bits (66), Expect = 4.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 110 SHSSEDSGFVDTKEVVEGLKCLKIEKDEVKSGEKKKQ 146
S S SG + KE+ E C I KD ++S +KK++
Sbjct: 841 SEMSVPSGINNLKELTEVTLCYNIRKDVIRSSDKKEE 877
>06_02_0023 +
10702040-10702364,10702530-10702747,10703643-10704190,
10704272-10704523,10704611-10704721,10704812-10704893,
10704969-10705061,10705146-10705340
Length = 607
Score = 30.7 bits (66), Expect = 4.0
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 299 SPASNIFPTPPRSENVPSPISESQTSYYPSNSDYTLSPELSPVYCSDYEKYQDLTSYEEC 358
SPA + PP E+VP P ++ + P+ + + +L PV S Y K + + Y E
Sbjct: 183 SPAPQSYLAPPLDEHVPPPKPDT-SKEQPTTCE---ACKLIPVMVSTYNK-EKMVEY-EM 236
Query: 359 PNETDKTRERSTSICSMKMKQFKDLQKEIAAGFSKME 395
R + + Q+ D QK + A +KM+
Sbjct: 237 RMVLQSFNGRGGPLKPVGPDQYSDAQKSVVALANKMQ 273
>02_04_0353 + 22287313-22287448,22287573-22287702,22288605-22289367
Length = 342
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 211 EIAQTSQQEQGYWEDVQDMIDGDYHSKESDILSEFFPANQQFYEPIAIVPTSTPEANPIE 270
E+ ++GYW + +M++ S S + SE + F A S A P+E
Sbjct: 285 ELQGEDDDDKGYWNSILNMVNSSMSSSSSSLTSEVVTDTEMFLPATAAAAAS---ATPVE 341
>01_06_1268 -
35878520-35879353,35879920-35880332,35881109-35881510,
35881598-35881619
Length = 556
Score = 30.7 bits (66), Expect = 4.0
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 581 SLH-SKQSPRIHVTHVLLEHSGADLQQGDSKGGDTPIHLAVNSINCDL 627
SLH + + + + LLE ++ D KG T +H+AV NCD+
Sbjct: 200 SLHFAARQGHVEIVKALLEKDPQLARRNDKKG-QTALHMAVKGTNCDV 246
>01_01_0499 -
3675303-3675484,3676888-3676982,3677046-3677096,
3677191-3677270,3677423-3677593,3677836-3677937,
3678092-3678244,3678392-3678523,3678702-3678788,
3678987-3679126,3679246-3679660
Length = 535
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 593 THVLLEHSGADLQQGDSKGGDTPIHLAVNSINCDLHLVLLL 633
T L GAD D GGDTP+H A + + +L +LLL
Sbjct: 109 TAAYLLDRGADPSTPDPNGGDTPLHWAAYNGDRELAKLLLL 149
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 30.3 bits (65), Expect = 5.3
Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 274 CANHLNYEDSVDVTSILNLDHMKDLSPASNIFPTPPRSENVPSPISESQTSYYPSNSDYT 333
C++ + ++S + N ++ S++ P PP P P+ + + S S ++
Sbjct: 206 CSSSASSDNSESSNAATNSAKSAKVAGCSSVRPPPPPP---PPPLPPPMPATFKSKSYFS 262
Query: 334 LSPELSPVYCSDYEKYQDLTSYEECPNETDKTRER 368
S SP S S C ++T +R R
Sbjct: 263 GSSRASPANSSSSSSSSSAPSTPSCSSDTAASRSR 297
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 30.3 bits (65), Expect = 5.3
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 359 PNETDKTRERSTSICSMKMKQFKDLQKEIAA----GFSKMECCEIMRKSCKEILQEHLLK 414
P D++R + C K KD+ A GFS + EI +++CK ++E++ K
Sbjct: 652 PLPDDQSRLQIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEK 711
Query: 415 -LNAELRRK 422
+ E RRK
Sbjct: 712 DIEMEKRRK 720
>08_02_1512 +
27627740-27629009,27629111-27629256,27629842-27630101,
27630346-27630412,27630511-27630545,27630818-27631587,
27631633-27631793
Length = 902
Score = 29.9 bits (64), Expect = 7.0
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 100 EEDRRSERVDSHSSEDSGFVDTKEVVEGLKCLKIEKDEVKSGEKKKQIVVLARKPPKEKV 159
EED+ E + S+ ++ K+++E +KC I K S ++K V+ +K + KV
Sbjct: 443 EEDKAMECGNLSSTLQKLYMWEKKLLEEVKCWVILKQLCLSQTEEKMRVLYNQKREELKV 502
Query: 160 -YCRVAKPYDAEDFYRQIKQINRKTLTGGQVLVNSI 194
Y R A+ + E I++++ K Q+ VN+I
Sbjct: 503 LYGRGAEAHKLEATETHIRKLSTKISIAIQI-VNTI 537
>07_03_1685 + 28645284-28645454,28645681-28647069
Length = 519
Score = 29.9 bits (64), Expect = 7.0
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 347 EKYQDLTSY-EECPNETDKTRERSTSICSMKMKQFKDLQKEIAAGFSKMECCEIMRKSCK 405
EKY +L S +EC + K E + M Q ++ + + +K+E ++ + CK
Sbjct: 324 EKYFELASKAQECDVSSRKKIEAA-------MLQVEEANRSKSNSLNKLEEAKLEFEKCK 376
Query: 406 EILQEHLLKLNAELRRKICVEVTRMNLKTCYGVMHHILLSLSKSGDDEDL 455
LQ+ L + +A R K+ VE + + G H SK + D+
Sbjct: 377 IALQDALKRAHAANRGKLAVEESVRRWLSESGYKRHSFHDSSKLKNAADI 426
>06_01_0924 -
7131937-7132041,7132309-7132407,7132498-7132596,
7132807-7132905,7133068-7133166,7133316-7133395,
7133522-7133843
Length = 300
Score = 29.9 bits (64), Expect = 7.0
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 571 DGQAALHLSCSLHSKQSPRIHVTHVLLEHSGADLQQGDSKGGDTPIHLAVNSINCDLHLV 630
DG LH + + + Q+ + LL + D+ D+ G TP+HLA+ S N D+ +
Sbjct: 201 DGATPLHYAVQVGALQTVK------LLIKNRVDVNVADNDGW-TPLHLAIQSRNRDIAKI 253
Query: 631 LLL 633
LL+
Sbjct: 254 LLV 256
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 29.9 bits (64), Expect = 7.0
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 395 ECCEIM--RKSCKEILQEHLLKLNAELRRKICVEVTRMNLKTCYGVMHHILLSLSKSGDD 452
+CC + +K K H+L ++ L+R +E K Y V+ + L LS S DD
Sbjct: 231 KCCSLQEAQKRMKIKKAPHILVIH--LKRFKYIEQLGRYKKLSYRVVFPMELKLSTS-DD 287
Query: 453 EDLQYSLFGLI 463
D +YSLF ++
Sbjct: 288 VDTEYSLFAVV 298
>02_05_1272 +
35373843-35374031,35374343-35374490,35374586-35374704,
35374992-35375121,35375122-35375201
Length = 221
Score = 29.9 bits (64), Expect = 7.0
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 640 KSWKNLAYLRNRSFVSPFDYARSAAKSTTRQNYPPEILDFFKKCR 684
+ W + NR P +++ TR +YP EIL+ + C+
Sbjct: 130 RPWSSCTKSSNRGNFHPSSILQTSKPDKTRNSYPVEILEALQSCK 174
>02_03_0291 -
17345049-17345088,17345137-17345169,17345332-17345411,
17345512-17345682,17347181-17347282,17348812-17348955,
17350228-17350350,17351929-17352006,17352224-17352363,
17353480-17353611,17354092-17354262,17354431-17354496,
17354575-17354596
Length = 433
Score = 29.9 bits (64), Expect = 7.0
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 596 LLEHSGADLQQGDSKGGDTPIHLAVNSINCDLHLVLLL 633
LL+H GA+ + + KG TP+HLAV +C++ VLL+
Sbjct: 106 LLDH-GANPDKPNEKGC-TPLHLAVEQGHCEIVKVLLV 141
>10_08_0911 - 21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 29.5 bits (63), Expect = 9.3
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 194 IQTDNYS----EVDRALN---SVKEIAQTSQ--QEQGYWEDVQDMIDGDYHSKESDILSE 244
I TD Y+ ++ R +N S +EIA+ ++ G+++ V +DG+ + D ++E
Sbjct: 2138 IDTDGYNLPVIDMSRLINPEFSEEEIAKLGSACEDWGFFQLVNHGVDGELLQRIKDDITE 2197
Query: 245 FFPANQQFYEPIAIVPTSTPEANPIEEFSCANHLNYEDSVDVTS 288
FF Q +AI P FS L++ D + +T+
Sbjct: 2198 FFRLPLQEKMSVAIPPNGLQGFGHHFVFSKEQKLDWVDLLFLTT 2241
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 29.5 bits (63), Expect = 9.3
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 306 PTPPRSENVPSPISE---SQTSYYPSNSDYTLSPELSPVYCS 344
P+PP + P P+S ++ Y+P DY +P P Y +
Sbjct: 81 PSPPPQQQQPRPVSPPPVAEPYYWPKPYDYGDAPREQPAYAT 122
>03_06_0555 -
34693067-34693196,34693450-34693688,34693956-34694033,
34694057-34694131,34694667-34694831,34695101-34695151,
34695250-34695300,34695462-34695533,34695736-34695948,
34696064-34696214,34696376-34696490,34696665-34696748,
34696841-34696964,34697064-34697145,34697238-34697299,
34697787-34697840,34697944-34698147
Length = 649
Score = 29.5 bits (63), Expect = 9.3
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 376 KMKQFKDLQKEIAAGFSKMECCEIMRKSCKEILQEHLLKLNAELRRKICVEVTRMNLKTC 435
K K+ L+KE+ + KM C + +++ E L K++ + VT L+TC
Sbjct: 77 KRKRNYSLEKELTVLWEKMRCHNVSSTERSKLVSEALRKMDGKYSEIAGSHVTARVLQTC 136
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.131 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,129,027
Number of Sequences: 37544
Number of extensions: 794079
Number of successful extensions: 2239
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2219
Number of HSP's gapped (non-prelim): 39
length of query: 684
length of database: 14,793,348
effective HSP length: 87
effective length of query: 597
effective length of database: 11,527,020
effective search space: 6881630940
effective search space used: 6881630940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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