Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001793-TA|BGIBMGA001793-PA|undefined
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 44 5e-04
03_06_0187 + 32209924-32210634 42 0.001
07_03_1157 - 24419157-24419948 39 0.017
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 37 0.069
01_01_0070 - 542603-542686,542803-543441 37 0.069
07_01_0310 + 2209084-2209554 36 0.16
07_01_0312 + 2214050-2214556 34 0.49
09_06_0081 + 20745627-20748144,20748211-20748308 33 0.85
01_05_0482 + 22614097-22614729,22614859-22615182,22615291-226153... 33 0.85
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 33 1.1
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 33 1.1
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 32 1.5
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 31 2.6
04_04_0765 - 27910189-27912393,27912521-27912598 31 2.6
01_05_0648 + 23915469-23915898,23916551-23916619,23916956-239173... 31 2.6
11_06_0610 - 25449085-25453284 31 3.4
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 31 3.4
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 31 4.6
04_04_0111 - 22842337-22842648,22843008-22843402,22843732-228440... 31 4.6
10_08_0620 - 19321612-19323237 30 6.0
10_06_0179 - 11508235-11508245,11508555-11508942 30 6.0
09_06_0354 - 22490833-22491417 30 6.0
08_01_0500 + 4338111-4338195,4339910-4340042,4340116-4340187,434... 30 6.0
06_01_0974 + 7541771-7542553,7542666-7542795,7543098-7543645,754... 30 6.0
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 30 6.0
12_02_1118 + 26210322-26212559 30 8.0
03_01_0542 + 4071906-4072241,4073093-4073184,4073275-4073317,407... 30 8.0
01_03_0227 + 13967966-13968559 30 8.0
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 44.0 bits (99), Expect = 5e-04
Identities = 47/170 (27%), Positives = 64/170 (37%), Gaps = 20/170 (11%)
Query: 482 DLVHPAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTARDPVHPVVAALMDTVPTV----- 536
+L A D V P PVT+ T A +PV P + + T P
Sbjct: 231 ELAAAARTTARDVFAPVTNPTTTPATNPVTVPATNPAMNPVTPGIVTVPSTNPATGYSNN 290
Query: 537 -VMEVYHPPAVPVTLIQTQTARDPVHPVVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQ 595
+ +P PVT+ T P P + + T PT+ V +P P + T+
Sbjct: 291 PNLPPLYPEPTPVTMPDPTTTTTPT-PFMNPV--TAPTMPSPVTNPATTP-AVTNPTTMP 346
Query: 596 DPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTWQDPVHLAVAALMD 645
P P +M T PT Y PPA + QTW +A A LMD
Sbjct: 347 YPYPPQQGGVMPTTPT-----YQPPAT-MPAAGGQTW----CVAKAGLMD 386
Score = 34.7 bits (76), Expect = 0.28
Identities = 40/149 (26%), Positives = 55/149 (36%), Gaps = 19/149 (12%)
Query: 521 PVHPVVAALMDTVPTVVMEVYHPPAV----PVTLIQTQTARDPVHPVVAALMDTVPTV-- 574
P + AA T V V +P PVT+ T A +PV P + + T P
Sbjct: 228 PRRELAAAARTTARDVFAPVTNPTTTPATNPVTVPATNPAMNPVTPGIVTVPSTNPATGY 287
Query: 575 ----VMEVYHPPAVPVTLMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQ 630
+ +P PVT+ T P P + + T PT+ V +P P +
Sbjct: 288 SNNPNLPPLYPEPTPVTMPDPTTTTTPT-PFMNPV--TAPTMPSPVTNPATTP-AVTNPT 343
Query: 631 TWQDPVHLAVAALMDTVPTVVMEVYHPPA 659
T P +M T PT Y PPA
Sbjct: 344 TMPYPYPPQQGGVMPTTPT-----YQPPA 367
Score = 34.3 bits (75), Expect = 0.37
Identities = 39/149 (26%), Positives = 53/149 (35%), Gaps = 19/149 (12%)
Query: 559 PVHPVVAALMDTVPTVVMEVYHP---PAV-PVTLMQAQTLQDPVHPAVAALMDTVPTVV- 613
P + AA T V V +P PA PVT+ +PV P + + T P
Sbjct: 228 PRRELAAAARTTARDVFAPVTNPTTTPATNPVTVPATNPAMNPVTPGIVTVPSTNPATGY 287
Query: 614 -----MEVYHPPAVPVTLMQAQTWQDPVHLAVAALMDTVPTVVMEVYHPPAVPVTLMQAQ 668
+ +P PVT+ T P T PT+ V +P P +
Sbjct: 288 SNNPNLPPLYPEPTPVTMPDPTTTTTPTPFMNPV---TAPTMPSPVTNPATTP-AVTNPT 343
Query: 669 TLQDPVHRAVAALMDTVPTVVMEVYHPPA 697
T+ P +M T PT Y PPA
Sbjct: 344 TMPYPYPPQQGGVMPTTPT-----YQPPA 367
Score = 33.9 bits (74), Expect = 0.49
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
Query: 91 PPAVPVTLIQTQTARDPVHPVVAALMDTVPTV------VMEVYHPPAVPVTLIQTQTAQD 144
P PVT+ T A +PV P + + T P + +P PVT+ T
Sbjct: 254 PATNPVTVPATNPAMNPVTPGIVTVPSTNPATGYSNNPNLPPLYPEPTPVTMPDPTTTTT 313
Query: 145 PVHLVVAALMDTVPTVVMKDPGNPAVAALMKTVPRVVMKMYRPPAVPVTLIQTQTAQDPE 204
P + T+P+ V PAV T P + Y PP + T T Q P
Sbjct: 314 PTPFMNPVTAPTMPSPVTNPATTPAV-----TNPTTMPYPY-PPQQGGVMPTTPTYQPPA 367
Query: 205 HLAVA 209
+ A
Sbjct: 368 TMPAA 372
Score = 29.9 bits (64), Expect = 8.0
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Query: 53 PPAVPVTLIQTQTAQDPVHLAVAALMDTVPIV------VMEVYHPPAVPVTLIQTQTARD 106
P PVT+ T A +PV + + T P + +P PVT+ T
Sbjct: 254 PATNPVTVPATNPAMNPVTPGIVTVPSTNPATGYSNNPNLPPLYPEPTPVTMPDPTTTTT 313
Query: 107 PVHPVVAALMDTVPTVVMEVYHPPAVPVTLIQTQTAQDPVHLVVAALMDTVPT 159
P P + + T PT+ V +P P T T P +M T PT
Sbjct: 314 PT-PFMNPV--TAPTMPSPVTNPATTPAVTNPT-TMPYPYPPQQGGVMPTTPT 362
>03_06_0187 + 32209924-32210634
Length = 236
Score = 42.3 bits (95), Expect = 0.001
Identities = 61/213 (28%), Positives = 88/213 (41%), Gaps = 16/213 (7%)
Query: 454 ATLIQAQRVQDPVHPAVAALTDIAPGIVDLVHPAVAALMDTVPTVVMEVYHPPAVPVTLI 513
AT++ + A L ++ PGI P V A+ T+P + + PAV T+
Sbjct: 12 ATMVAVVLLLGATTQAARLLDELVPGIPMPTIPGVPAVGPTIP-AIPTIPGVPAVGPTIP 70
Query: 514 QTQTARDPVHPVVAALMDTVPTVVMEVYHPPAVPVTLIQTQTARD-PVHPVVAALMDTVP 572
T P P V A+ T+P + + PAV T+ T P P V + + T+P
Sbjct: 71 TIPTV--PTIPGVPAVGPTIP-AIPTIPGVPAVGPTIPTIPTIPTIPGVPAVGSTIPTIP 127
Query: 573 TVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAALM----DTVPTVVMEVYHPPAVPVTLMQ 628
T+ P +P T+ T+ P P V L VPT + +V PP P ++
Sbjct: 128 TIPGVPAVGPTIP-TIPGVPTI--PTVPGVPELPVNPGGVVPT-IPKVPLPPVNPGAVVP 183
Query: 629 AQTWQDPVHLAVAALMDTVPTVVMEVYHPPAVP 661
A PV A VPT + V PAVP
Sbjct: 184 AVP-ALPVPPIPGAAGGVVPT--LPVPPLPAVP 213
Score = 35.9 bits (79), Expect = 0.12
Identities = 48/179 (26%), Positives = 70/179 (39%), Gaps = 9/179 (5%)
Query: 92 PAVP-VTLIQTQTARDPVHPVVAALMDTVPTV--VMEVYHPPAVPVTLIQTQTAQDPVHL 148
P +P V + P P V A+ T+PT+ V + PAV T+ T P
Sbjct: 41 PTIPGVPAVGPTIPAIPTIPGVPAVGPTIPTIPTVPTIPGVPAVGPTIPAIPTI--PGVP 98
Query: 149 VVAALMDTVPTVVMKDPGNPAVAALMKTVPRVVMKMYRPPAVPVTLIQTQTAQDPEHLAV 208
V + T+PT+ PG PAV + + T+P + P +P P +
Sbjct: 99 AVGPTIPTIPTIPTI-PGVPAVGSTIPTIPTIPGVPAVGPTIPTIPGVPTIPTVPGVPEL 157
Query: 209 AALMDIVTTVVMEVYHPPAVPVTLIQTQTAKDPVHLVVAALMDTVPTVVMKVYHPPAVP 267
V + +V PP P ++ A PV + A VPT + V PAVP
Sbjct: 158 PVNPGGVVPTIPKVPLPPVNPGAVVPAVPAL-PVPPIPGAAGGVVPT--LPVPPLPAVP 213
Score = 32.7 bits (71), Expect = 1.1
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 23/165 (13%)
Query: 15 PAVPSSNTDSNSNSVGPGNPAVAALMKTVPRVVMKMYRPPAVPVTLIQTQTAQDPVHLAV 74
P VP+ + PG PAV + T+P V + PAV T+ T P AV
Sbjct: 44 PGVPAVGPTIPAIPTIPGVPAVGPTIPTIP-TVPTIPGVPAVGPTIPAIPTI--PGVPAV 100
Query: 75 AALMDTVPIVVMEVYHPPAVP-VTLIQTQTARDPVHPVVAALMDTVPTVVMEVYHPPAVP 133
+ T+P + P +P V + + P P V A+ T+PT+ P VP
Sbjct: 101 GPTIPTIPTI-------PTIPGVPAVGSTIPTIPTIPGVPAVGPTIPTI-------PGVP 146
Query: 134 VTLIQTQTAQDPVHLVVAALMDTVPTVVMKDPGNPAVAALMKTVP 178
+ PV+ ++ T+P V + P NP A++ VP
Sbjct: 147 TIPTVPGVPELPVN--PGGVVPTIPKVPL-PPVNP--GAVVPAVP 186
>07_03_1157 - 24419157-24419948
Length = 263
Score = 38.7 bits (86), Expect = 0.017
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 349 EDPVHPAVAALMDIA----PAIVVEA--YHPPAVPATLIQAQRMQDPVHPAVAALMDIAP 402
E P HP V L PA+V E + P PA + + + ++P HPAV L P
Sbjct: 92 ELPPHPVVPELPKHEEPPHPAVVPELPKHEEPPHPAVVPEFPKHEEPPHPAVPELPH--P 149
Query: 403 AIVVEAYHPPAVPATLIQAQRMQDPVHLAVAAL--MDIALAIVVEVYHPPAVPATLI-QA 459
A V E H PAVP + + ++P H V L ++ A V E+ P P + +
Sbjct: 150 A-VPEIPH-PAVP----ELPKHEEPPHPVVPELPKPEVPHAAVPELPKPELPPHPAVPEL 203
Query: 460 QRVQDPVHPAVAALTDIAPGIVDLVHPAVAAL 491
+ ++P HP V L P + HP V L
Sbjct: 204 PKHEEPPHPVVPEL----PKHEEPPHPVVPEL 231
>07_01_0389 -
2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 36.7 bits (81), Expect = 0.069
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 373 PPAVPATLIQAQRMQDPVHPAVAALMDIAPAIVVEA--------YHPPAVPATLIQAQRM 424
PP P +A R P + ++ +D A A++ EA + PPA+P+ L A R+
Sbjct: 18 PPNPPPRAPRATRTATPDDASSSSAVDDAAALLAEAGCTLLVPLHQPPALPSPLSFAPRL 77
Query: 425 QDPVHLAVAALMDIALAIVVEVYHPPA-VPATLIQAQRVQDP-VHPAVAALTDIAPGIVD 482
+ A AAL D LA + PA + L+ P + A+ ++ + PG++
Sbjct: 78 ARALAAADAALRDRLLAGLAAFAESPARLRQLLLPTSAAHSPSLARALLSVPALQPGLLG 137
Query: 483 LVHPAVAALMDTV 495
L+ + D V
Sbjct: 138 LLLDKLPEHFDNV 150
Score = 30.7 bits (66), Expect = 4.6
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 352 VHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHPAVAALMD-IAPAIVVEAYH 410
V A A L + ++V + PPA+P+ L A R+ + A AAL D + + A
Sbjct: 43 VDDAAALLAEAGCTLLVPLHQPPALPSPLSFAPRLARALAAADAALRDRLLAGLAAFAES 102
Query: 411 PPAVPATLIQAQRMQDPVHLAVAALMDIAL 440
P + L+ P LA A L AL
Sbjct: 103 PARLRQLLLPTSAAHSP-SLARALLSVPAL 131
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 36.7 bits (81), Expect = 0.069
Identities = 41/143 (28%), Positives = 52/143 (36%), Gaps = 14/143 (9%)
Query: 430 LAVAALMDIALAIVVEVYHPPAVPA----TLIQAQRVQDPVHPAVAALT-----DIAPGI 480
LA+AAL+ + LA+ P A PA T + + P PA A T +AP
Sbjct: 11 LALAALLALHLALAA-AQSPAAAPAQPTPTPVPTAPAKSPPAPATPAPTATPTPPVAPAK 69
Query: 481 VDLVHPAVAALMDTVPTVVM----EVYHPPAVPVTLIQTQTARDPVHPVVAALMDTVPTV 536
V PAVA + PT V PP P + + P P A T P V
Sbjct: 70 APPVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPPV 129
Query: 537 VMEVYHPPAVPVTLIQTQTARDP 559
P A+P A P
Sbjct: 130 AAPAEAPAALPPATTPPPVAEAP 152
Score = 32.7 bits (71), Expect = 1.1
Identities = 41/153 (26%), Positives = 47/153 (30%), Gaps = 11/153 (7%)
Query: 469 AVAALTDIAPGIVDLVHPAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTARDPVHPVVAA 528
A+AAL + + PA A T V P P T T T PV P A
Sbjct: 12 ALAALLALHLALAAAQSPAAAPAQPTPTPVPTAPAKSPPAPATPAPTATPTPPVAPAKA- 70
Query: 529 LMDTVPTVVMEVYHPPAVPVTLIQTQTARDPVHPVVAALMDTVPTVVMEVYHPPAVPVTL 588
P V P PVT + P PV + P V PPA P
Sbjct: 71 -----PPVA-----PAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVSPPPATPPPA 120
Query: 589 MQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPA 621
+ T PA A T V PA
Sbjct: 121 LPPSTPPPVAAPAEAPAALPPATTPPPVAEAPA 153
>07_01_0310 + 2209084-2209554
Length = 156
Score = 35.5 bits (78), Expect = 0.16
Identities = 39/129 (30%), Positives = 46/129 (35%), Gaps = 9/129 (6%)
Query: 449 PPAVPATLIQAQRVQDPVHPAVAALTDIAPGIVDLVHPAVAALMDTVPTVVM----EVYH 504
PPAVPA + P PA+ A T V V A M VP V + V
Sbjct: 22 PPAVPAVTLPPM----PAIPAIPAATLPPIPAVPTVPNAALPPMPAVPKVALPPMPAVPA 77
Query: 505 PPAVPVTLIQTQTARDPVHPVVAALMDTVPTVVMEVYHP-PAVPVTLIQTQTARDPVHPV 563
P VP + A V M VP V V P PAVP + + V V
Sbjct: 78 VPTVPAVALPPMPAVPAVPTATLPPMPAVPAVPNAVLPPIPAVPKVTLPPMPSIPAVPKV 137
Query: 564 VAALMDTVP 572
M +VP
Sbjct: 138 TLPPMPSVP 146
Score = 35.5 bits (78), Expect = 0.16
Identities = 41/126 (32%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 543 PPAVPVTLIQTQTARDPVHPVVAALMDTVPTVVMEVYHP-PAVPVTLMQAQTLQDPVHPA 601
PPAVP + A + + VPTV P PAVP + P PA
Sbjct: 22 PPAVPAVTLPPMPAIPAIPAATLPPIPAVPTVPNAALPPMPAVPKVAL-------PPMPA 74
Query: 602 VAALMDTVPTVVM-EVYHPPAVPVTLMQAQTWQDPVHLAVAALMDTVPTVVM-EVYHPPA 659
V A + TVP V + + PAVP + V AV + VP V + + PA
Sbjct: 75 VPA-VPTVPAVALPPMPAVPAVPTATLPPMPAVPAVPNAVLPPIPAVPKVTLPPMPSIPA 133
Query: 660 VP-VTL 664
VP VTL
Sbjct: 134 VPKVTL 139
Score = 35.5 bits (78), Expect = 0.16
Identities = 36/108 (33%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 91 PPAVPVTLIQTQTARDPVHPVVAALMDTVPTVVMEVYHP-PAVPVTLIQTQTAQDPVHLV 149
PPAVP + A + + VPTV P PAVP + A V V
Sbjct: 22 PPAVPAVTLPPMPAIPAIPAATLPPIPAVPTVPNAALPPMPAVPKVALPPMPAVPAVPTV 81
Query: 150 VAALMDTVPTVVMKDPGNP-AVAALMKTVPRVVMKMYRP-PAVP-VTL 194
A + +P V P P A M VP V + P PAVP VTL
Sbjct: 82 PAVALPPMPAV----PAVPTATLPPMPAVPAVPNAVLPPIPAVPKVTL 125
>07_01_0312 + 2214050-2214556
Length = 168
Score = 33.9 bits (74), Expect = 0.49
Identities = 43/138 (31%), Positives = 50/138 (36%), Gaps = 18/138 (13%)
Query: 54 PAVPVTLIQTQTAQDPVHLAVAALMDTVPIVVMEVYHP-PAVPVTLIQTQTARDPVHPVV 112
P VP + A V A M VP V P PAVP + P P V
Sbjct: 43 PTVPAVTLPPMPAIPAVPAATLPPMPAVPTVPNAALPPMPAVPKVAL-------PPMPAV 95
Query: 113 AALMDTVPTVVMEVYHPPAVPVTLIQTQTAQDPVHLVVAALMDTVPTVVMKD-PGNPAVA 171
A VPTV PAVP + A V V M VP V + P PAV
Sbjct: 96 PA----VPTVPA----VPAVPAASLPPMPAVPAVPNAVLPPMPAVPKVTLPPMPSMPAVP 147
Query: 172 AL-MKTVPRVVMKMYRPP 188
+ + +P V M PP
Sbjct: 148 KVTLPPMPSVPMPFLAPP 165
Score = 31.5 bits (68), Expect = 2.6
Identities = 46/139 (33%), Positives = 52/139 (37%), Gaps = 21/139 (15%)
Query: 529 LMDTVPTVVMEVYHPPAVPVTLIQTQTARDPVHPVVAALMDTVPTVVMEVYHP-PAVPVT 587
L D P + V P VP + A V M VPTV P PAVP
Sbjct: 31 LADATPPAAVPV---PTVPAVTLPPMPAIPAVPAATLPPMPAVPTVPNAALPPMPAVPKV 87
Query: 588 LMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTWQDPVHLAVAALMDTV 647
+ P PAV A VPTV PAVP + V AV M V
Sbjct: 88 AL-------PPMPAVPA----VPTVPA----VPAVPAASLPPMPAVPAVPNAVLPPMPAV 132
Query: 648 PTVVM-EVYHPPAVP-VTL 664
P V + + PAVP VTL
Sbjct: 133 PKVTLPPMPSMPAVPKVTL 151
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 33.1 bits (72), Expect = 0.85
Identities = 90/387 (23%), Positives = 129/387 (33%), Gaps = 36/387 (9%)
Query: 352 VHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHPAVAALMDIAPAIVVEAYHP 411
+H AL +AP + V P VP L+ A + P PA A D+ P +V +
Sbjct: 412 MHTTSLALRALAPHLHVSRASAPTVPTPLVPAPPVPTPHAPAPPA--DVPPGFIV-SLTT 468
Query: 412 PAVPATLIQAQRMQDPVHLAVAALMDIALAIVVEVYHPPAVPATLIQAQRVQDPVHPAVA 471
H+ +L + A + V H PA P P PA A
Sbjct: 469 ARYSFDYDGVSSSSSTPHVPTTSLALRSPAPHLRVRHMPAPPV----------PTPPAPA 518
Query: 472 ALTDIAPGIVDLVH-PAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTARDPVHPVVAALM 530
P VH P V A T P ++ P A P + + + AL
Sbjct: 519 PPVSTLPSPAPSVHTPPVTAPPATAPPMIAP---PVATPPDSASSPSTVPRMPSAPLALR 575
Query: 531 DTVPTVVMEVYHPPAVPVTLIQTQTARDPVHPVVAALMDTV-PTVVMEVYHPPAVPVT-- 587
P H A+ V++ + + P PV A TV PT + +
Sbjct: 576 ALAP-------HLRALRVSVPHPRASSAPAPPVAAPRGWTVSPTTARYSFSDSGASSSSA 628
Query: 588 LMQAQTLQDPVH-PAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTWQDPVHLAVAALMDT 646
+A T +H PA V T +P T+ + V L+ A M
Sbjct: 629 APRASTAPLALHAPAPHLRAPPVATPPPAAPRGWTMPTTIGRYSFSYGGVSLSYA--MPC 686
Query: 647 VPTVVMEVYHPPAVPVTLMQAQTLQDPVHRAVAALMDTVPTVVMEV-YHPPAVPVTLMQA 705
PT + + +P ++A+ A T P PPA+P L
Sbjct: 687 APTAPLSL----RLPAPHLRARRAPTSPPAAATPRAPTPPAAAAAAPAAPPALPSGLPSW 742
Query: 706 QTL-QDPVHPAVAALMDIAQAIVMEVY 731
L + P PA A L+ A A E Y
Sbjct: 743 PVLVRPPTGPARARLVPAAPAGAFEEY 769
>01_05_0482 +
22614097-22614729,22614859-22615182,22615291-22615396,
22615628-22615668
Length = 367
Score = 33.1 bits (72), Expect = 0.85
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 72 LAVAALMDTVPIVVMEVYHPPAVPVTLIQTQTARDPVHPVVAALMDTVPTV 122
+AVAA + P V+ P A +TLI A DP+ VVA MD V TV
Sbjct: 4 VAVAAALAPAPATA-PVFSPAAAGLTLIAAAAA-DPIAAVVAGAMDGVVTV 52
Score = 33.1 bits (72), Expect = 0.85
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 487 AVAALMDTVPTVVMEVYHPPAVPVTLIQTQTARDPVHPVVAALMDTVPTV 536
AVAA + P V+ P A +TLI A DP+ VVA MD V TV
Sbjct: 5 AVAAALAPAPATA-PVFSPAAAGLTLIAAAAA-DPIAAVVAGAMDGVVTV 52
Score = 31.5 bits (68), Expect = 2.6
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 204 EHLAVAALMDIVTTVVMEVYHPPAVPVTLIQTQTAKDPVHLVVAALMDTVPTV 256
E +AVAA + V+ P A +TLI A DP+ VVA MD V TV
Sbjct: 2 EDVAVAAAL-APAPATAPVFSPAAAGLTLIAAAAA-DPIAAVVAGAMDGVVTV 52
Score = 31.5 bits (68), Expect = 2.6
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 112 VAALMDTVPTVVMEVYHPPAVPVTLIQTQTAQDPVHLVVAALMDTVPTV 160
VAA + P V+ P A +TLI A DP+ VVA MD V TV
Sbjct: 6 VAAALAPAPATA-PVFSPAAAGLTLIAAAAA-DPIAAVVAGAMDGVVTV 52
Score = 31.5 bits (68), Expect = 2.6
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 526 VAALMDTVPTVVMEVYHPPAVPVTLIQTQTARDPVHPVVAALMDTVPTV 574
VAA + P V+ P A +TLI A DP+ VVA MD V TV
Sbjct: 6 VAAALAPAPATA-PVFSPAAAGLTLIAAAAA-DPIAAVVAGAMDGVVTV 52
Score = 30.3 bits (65), Expect = 6.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 638 LAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPVHRAVAALMDTVPTV 688
+AVAA + P V+ P A +TL+ A DP+ VA MD V TV
Sbjct: 4 VAVAAALAPAPATA-PVFSPAAAGLTLIAAAAA-DPIAAVVAGAMDGVVTV 52
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 601 AVAALMDTVPTVVMEVYHPPAVPVTLMQAQTWQDPVHLAVAALMDTVPTV 650
AVAA + P V+ P A +TL+ A DP+ VA MD V TV
Sbjct: 5 AVAAALAPAPATA-PVFSPAAAGLTLIAAAA-ADPIAAVVAGAMDGVVTV 52
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 32.7 bits (71), Expect = 1.1
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 639 AVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPVHRAVAALMDTVPTVVMEVYHPPAV 698
A A + + T +EV H A+P+ L +L V A AL V + + P AV
Sbjct: 126 AAADALHRLATRAVEVLHAMAIPIELSDRDSL---VKSASTALNSKVVSQYSSLLSPLAV 182
Query: 699 PVTLMQAQTLQDPVHPAVAALMDI 722
L ++ DP HP + L DI
Sbjct: 183 DAAL----SVVDPAHPDLLDLRDI 202
Score = 30.7 bits (66), Expect = 4.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 523 HPVVAA-LMDTVPTVVMEVYHPPAVPVTLIQTQTARDPVHPVVAALMDTVPTVVMEVYHP 581
HP AA + + T +EV H A+P+ L + RD + V + + + V+ Y
Sbjct: 123 HPTAAADALHRLATRAVEVLHAMAIPIEL----SDRDSL---VKSASTALNSKVVSQYSS 175
Query: 582 PAVPVTLMQAQTLQDPVHPAVAALMD 607
P+ + A ++ DP HP + L D
Sbjct: 176 LLSPLAVDAALSVVDPAHPDLLDLRD 201
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 32.7 bits (71), Expect = 1.1
Identities = 43/158 (27%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 556 ARDPVHPVVAALMDTVPTVVM---EVYHPPAVPVTLMQAQTLQDPVHPAVAALMDTVPTV 612
A+ V P V PT V E PP V +T A T PV P AA+ + P +
Sbjct: 98 AKGAVSPAVPTRPQNAPTPVTPPKEYNAPPPVELT-PPAPTHVAPVAPPQAAVENPAPVL 156
Query: 613 VMEVYHPPAVPVTLMQAQTWQDPVHLAVAALMDTVPTVVM-EVYHPPAVPVTLMQAQTLQ 671
P P L Q V A +P V V +PP+ P+
Sbjct: 157 -------PGTPALLPSVQAPAPSV-----ARNPNLPIVQPPSVNNPPSRPIGSGNGVPPY 204
Query: 672 DPVHRAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQ 709
P R++ A+ + V E PP P + QA Q
Sbjct: 205 PPPQRSLPAIPPSTSGVPRESVKPPVAPPIIAQAPRQQ 242
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 15/107 (14%)
Query: 17 VPSSNTDSNSNSVGPGNPAV----AALMKTVPRVVMKMYRP--PAVPVTLIQTQTAQDPV 70
V SS TDS+ ++V P A+ AL + P + + P P P TL +Q P
Sbjct: 237 VGSSQTDSHQHAVAPQQAAIQPQHQALTSSQPLALPALPAPNAPPPPPTLQSQPPSQYPG 296
Query: 71 HL--------AVAALMDTVPIVVMEVYH-PPAVPVTLIQTQTARDPV 108
HL +A + +VP + + Y+ PPA P + Q PV
Sbjct: 297 HLPHSQVPPVPPSAPVPSVPALPRDPYYAPPAQPTETMHQQYQAPPV 343
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 31.5 bits (68), Expect = 2.6
Identities = 75/308 (24%), Positives = 105/308 (34%), Gaps = 40/308 (12%)
Query: 352 VHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHPAVAALMDIAPAIVVEAYHP 411
V P + +AP + V P P A + P PA +AP A P
Sbjct: 261 VRPLLLLHCTLAPHLCVPRVLSPPAPMPSALATHVPTPPAPAPPVPTPLAPT---PADVP 317
Query: 412 PA--VPATLIQAQRMQDPVHLAVAA-LMDIALAIVVEVYHP-----PAVPATLIQAQRVQ 463
P + T+ + D + A M LA+ V HP PA P A
Sbjct: 318 PGFTMSPTITRYSFGYDGASSSSAMPRMRTTLALCVPAPHPRVPRAPAPPVPAPPAPTPP 377
Query: 464 DPVHPAVAALTDIAPGIVDLVHPAV---------AALMDTVP--TVVMEVYHPPA----- 507
P PA+A D+ PG V PA A+ +P T PA
Sbjct: 378 IPTPPALAPPADVPPGFT--VSPATTRYSFGYGGASSSSAMPHATTAPLALRAPAPHLCV 435
Query: 508 --VPVTLIQTQTARDP---VHPVVAALMDTVPTVVMEVYHPPAVPVTLIQTQTARDPVHP 562
+P L+ T A P P +A + T P PP V+ T +
Sbjct: 436 SRMPPPLVPTPPAHAPPVATPPTLATPVPTPPVTAPPADVPPGFTVSPTTTHYSFGYGGA 495
Query: 563 VVAALMDTVPTVVMEVYHP-PAVPVTLMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPA 621
+++ M + + P P + V+ M A + P PA +PT M PA
Sbjct: 496 SLSSAMPRAAAAPLVLRGPAPHLRVSRMPAPPIPMPPAPA-----PPIPTPSMPFPTVPA 550
Query: 622 VPVTLMQA 629
PVT+ A
Sbjct: 551 PPVTVPPA 558
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 31.5 bits (68), Expect = 2.6
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 111 VVAALMDTVPTVVMEVYHPPAVPVTLIQTQTAQDPVHLVVAALMDTVPTVVMKDPGNPAV 170
V A+ +D VP V + P A T A P VAA T P VV P +P
Sbjct: 367 VTASPVDVVPPV--DAGSPAADVATTCSPAAAGMPA-AAVAAAGSTAPAVVA--PDSPVA 421
Query: 171 AALMKTVPRVVMKMYRPPAVPVTLIQTQTA 200
A + + P V P A PV ++ ++
Sbjct: 422 AVAVFSSPTAVAASSSPAASPVDIVAASSS 451
>01_05_0648 +
23915469-23915898,23916551-23916619,23916956-23917315,
23918435-23918973
Length = 465
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 354 PAVAALMDIAPAIVVEAYHPPA-VPATLIQAQRMQDPVHPAVAALMDIAPAIV-VEAYHP 411
P L+ +A A VV A PA A+ A P P AA++ +AP + V P
Sbjct: 3 PTALHLIAVAVAAVVAAAAAPASASASAAGAFSEVPPETPCAAAIVSVAPCLAHVAVVAP 62
Query: 412 PAVPA 416
PA PA
Sbjct: 63 PARPA 67
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.1 bits (67), Expect = 3.4
Identities = 36/140 (25%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Query: 615 EVYHPPAVPVTLMQAQTWQDPVHLAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPV 674
E PP PV + P H V + + PT PP VPVT P
Sbjct: 1028 EKSQPPPSPVESVLPPVKSSPPHAPV--ISEPPPTKSS----PPQVPVTSEPPPAKSSPP 1081
Query: 675 HRAVA---ALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAALMDIAQAIVMEVY 731
H ++ + P E PP+VP + + + P A + + V +
Sbjct: 1082 HEPISPPETPEKSYPPSTPEESSPPSVPKA--SSPPTEKSLPPP--ATVSLPPPTVKPL- 1136
Query: 732 WPLAVPVTLMQAPQKNPPRP 751
P VPV+ P+K+PP P
Sbjct: 1137 -PPPVPVSSPPPPEKSPPPP 1155
>06_03_1490 + 30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 31.1 bits (67), Expect = 3.4
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 521 PVHPVVAALMDTVP-TVVMEVYHPPAVPVTLIQTQTA--RDPVHPVVAALMDTVPTVVME 577
P PV D+VP T + + +VP T +Q P P+ +L D+VP+ M+
Sbjct: 923 PGTPVEKPFFDSVPGTPLQKSVFDYSVPSTPMQKSVFDYSVPSTPLQKSLFDSVPSTPMQ 982
Query: 578 VYHPPAVPVTLMQAQTLQD-PVHPAVAALMDTVPT 611
+VP T MQ P P +L D+ P+
Sbjct: 983 KSVFDSVPSTPMQNSLFDSFPSTPMQRSLFDSGPS 1017
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 30.7 bits (66), Expect = 4.6
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 656 HPPAVPVTLMQAQTLQDPVHRAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTL 708
H P P+ L+ + ++ P+ R + +L V+++YH V L A TL
Sbjct: 581 HSPPSPILLLLVEGVRVPLPRTIRSLALVAMITVVDLYHVLTAVVPLYVAMTL 633
>04_04_0111 -
22842337-22842648,22843008-22843402,22843732-22844073,
22844154-22844282,22844402-22844514,22844596-22844667,
22844783-22844859,22844978-22845052,22845058-22845121,
22845332-22845403,22845496-22845628,22846859-22846961
Length = 628
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 12 YHPPAVPSSNTDSNSNSVGPGNPAVAALMKTVPRVVMKMYRPPAVPVTLIQTQTAQDP-V 70
++PP S DS + ++ G A AAL+ VP + +R +DP V
Sbjct: 227 FNPPTPTVSQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRKPEEHFFDVPAEEDPEV 286
Query: 71 HL 72
HL
Sbjct: 287 HL 288
>10_08_0620 - 19321612-19323237
Length = 541
Score = 30.3 bits (65), Expect = 6.0
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 391 HPAVAA-LMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVAALMDIALAIVVEVYHP 449
HP AA + + A VE H A+P L + V A AL ++ + P
Sbjct: 127 HPTAAADALHLLAARAVEVLHGMAIPVELSDRDAL---VKSASTALNSKVVSQYSTLLSP 183
Query: 450 PAVPATLIQAQRVQDPVHPAVAALTDI 476
AV A L V DP HP + L DI
Sbjct: 184 LAVDAALA----VVDPAHPYLLDLRDI 206
>10_06_0179 - 11508235-11508245,11508555-11508942
Length = 132
Score = 30.3 bits (65), Expect = 6.0
Identities = 27/67 (40%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 352 VHPAVAALMDIAPAIVVEAYHPPAVP--ATLIQAQRMQD-PVHPAVAALMDIAPAIVVEA 408
V A AAL+ I A+ V A P A P A L +M P PA A AP+ V A
Sbjct: 6 VAAAAAALVAILSAVAVTAQSPSAAPKMAPLPPPPKMAPLPPPPAAKAPTASAPSPVTAA 65
Query: 409 YHPPAVP 415
PPA P
Sbjct: 66 -SPPAPP 71
>09_06_0354 - 22490833-22491417
Length = 194
Score = 30.3 bits (65), Expect = 6.0
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 548 VTLIQTQTARDPVHPVVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPVHPAVAA 604
V + T TA + P V +D T PP VP+ Q+Q QDP P AA
Sbjct: 28 VVQLTTTTAELELEPTVTVQVDDNKTGAAADETPPVVPL---QSQETQDPNEPKAAA 81
>08_01_0500 +
4338111-4338195,4339910-4340042,4340116-4340187,
4340524-4340587,4341383-4341459,4341586-4341657,
4341741-4341853,4341995-4342126,4342204-4342545,
4342628-4343022,4343293-4343603,4343967-4344066
Length = 631
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 12 YHPPA-VPSSNTDSNSNSVGPGNPAVAALMKTVPRVVMKMYRPPAVPVTLIQTQTAQDP- 69
Y+PP V S + S++ ++ G A AAL+ +P + YR +DP
Sbjct: 196 YNPPTPVQSPGSSSSTGAIAGGVAAGAALLFAIPAIGFAWYRRRKPQEHFFDVPAEEDPE 255
Query: 70 VHL 72
VHL
Sbjct: 256 VHL 258
>06_01_0974 +
7541771-7542553,7542666-7542795,7543098-7543645,
7544482-7544864,7546670-7546766
Length = 646
Score = 30.3 bits (65), Expect = 6.0
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 374 PAVPATLIQA-QRMQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQA-QRMQDPVHLA 431
P VP + A +R++DP AAL+D A A A A A L+ A QD
Sbjct: 86 PLVPRLVAAALRRVRDPDSSVRAALVDAARAAAAAAAAADAALAPLVGALLHEQDQCAQL 145
Query: 432 VAALMDIALAIVVEVYHPPAVPATLIQA 459
+AL A A VE P A A +QA
Sbjct: 146 ASAL---AAAAAVEASAPSADLAAYLQA 170
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 30.3 bits (65), Expect = 6.0
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 648 PTVVMEVYHPPAVPVTLMQAQTLQDPVHRAVAALMDTVPTVVMEVYHPPAVPVTLMQAQT 707
P +V EV+ + L QA Q + A L DTVP + + ++ AQT
Sbjct: 58 PALVQEVFMGNVLSANLGQAPARQAALG---AGLPDTVPCTTVNKVCSSGMKAVMLAAQT 114
Query: 708 LQDPVHPAVAA 718
+Q +H V A
Sbjct: 115 IQLGMHDVVVA 125
>12_02_1118 + 26210322-26212559
Length = 745
Score = 29.9 bits (64), Expect = 8.0
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 365 AIVVEAYHPPAVPATLIQAQRMQDPVHPAVAA--LMDIAPAIVVEAYHPPAVPATLIQAQ 422
++ V PP P L++ PV +A+ A +VV+ Y P A PA+
Sbjct: 654 SVFVVGRMPPTAP--LVEKPDELGPVGSYLASPEFRTSASVLVVKRYDPAANPASKRYDP 711
Query: 423 RMQDPVHLAVAALMDIALAIVVEVYHPP 450
+ + P AL ++ A VV V H P
Sbjct: 712 KARPPAATEEDALDELTGAAVVPVAHSP 739
>03_01_0542 +
4071906-4072241,4073093-4073184,4073275-4073317,
4073601-4073720,4073785-4073949,4074042-4074163,
4074357-4074476,4074645-4074936
Length = 429
Score = 29.9 bits (64), Expect = 8.0
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 202 DPEHLAVAALMDIVTTVVMEVYHPPAVPVTLIQTQTAKDPVHLVVAALMDTVP--TVVMK 259
D L ++ + + T VYH VP L+ + VH+ + M +P TV K
Sbjct: 172 DLHALFFKSIKEQIITSFRWVYHLYFVPFVLVDPENMTGMVHVKLDRAMQPLPLTTVYHK 231
Query: 260 VYHPPAVPVTLIQT 273
+ + P TL QT
Sbjct: 232 LTPVDSTPYTLFQT 245
>01_03_0227 + 13967966-13968559
Length = 197
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 362 IAPAIVVEAYHPPAVPATLIQAQRMQDPVHPAVAALMDIAPAIVV-----EAYHPP--AV 414
+ P I ++ PP VPAT + +R+ HP ++ +PA+ + A H P +
Sbjct: 81 VPPPITAVSFLPPLVPATAMGRRRVVARSHPPPELAVNGSPALKIGGNGMSASHLPEERI 140
Query: 415 PATLI 419
PA+L+
Sbjct: 141 PASLL 145
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.131 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,833,469
Number of Sequences: 37544
Number of extensions: 962228
Number of successful extensions: 2956
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2813
Number of HSP's gapped (non-prelim): 152
length of query: 767
length of database: 14,793,348
effective HSP length: 88
effective length of query: 679
effective length of database: 11,489,476
effective search space: 7801354204
effective search space used: 7801354204
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -