GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001793-TA|BGIBMGA001793-PA|undefined
         (767 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    25   2.3  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    25   2.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   5.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   5.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   9.3  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 431 AVAALMDIALAIVVEVYHPPAVPATLIQAQRV 462
           AV +L  +   +VV VYHP   P  + Q Q V
Sbjct: 8   AVMSLRALKYPMVVHVYHPYRQPDGMNQCQAV 39


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 431 AVAALMDIALAIVVEVYHPPAVPATLIQAQRV 462
           AV +L  +   +VV VYHP   P  + Q Q V
Sbjct: 8   AVMSLRALKYPMVVHVYHPYRQPDGMNQCQAV 39


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 17   VPSSNTDSNSNSVGPGNPAVAALMKTVPRVVMKMYRPPAVPVTLI 61
            VP++ T   +    PG+PA   ++ + P+ +   + PP  P  +I
Sbjct: 1200 VPTTVTYCQTEEDVPGSPADIKVVVSSPQALFISWLPPLEPNGII 1244


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 17   VPSSNTDSNSNSVGPGNPAVAALMKTVPRVVMKMYRPPAVPVTLI 61
            VP++ T   +    PG+PA   ++ + P+ +   + PP  P  +I
Sbjct: 1196 VPTTVTYCQTEEDVPGSPADIKVVVSSPQALFISWLPPLEPNGII 1240


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 1   MDTAPTVVMEVYHPPAVPSSNTDSNSN 27
           ++T P +       P++ S+NT SNS+
Sbjct: 528 LETTPVLPSRFQSHPSIDSANTISNSS 554


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.131    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,090
Number of Sequences: 429
Number of extensions: 9391
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 13
length of query: 767
length of database: 140,377
effective HSP length: 63
effective length of query: 704
effective length of database: 113,350
effective search space: 79798400
effective search space used: 79798400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)