GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001792-TA|BGIBMGA001792-PA|undefined
         (141 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              26   0.13 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   3.8  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   6.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   6.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   8.7  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     20   8.7  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 26.2 bits (55), Expect = 0.13
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)

Query: 38  GDFRMNPENISAFGQLHKDNMPIKINTIYLDTTFQNESFDNFPRRKDS--IRMLVNHIK 94
           G F  N E ++ +     D M  K+  +  DTTF  E F     + DS  +  LVN+ K
Sbjct: 50  GIFDKNDEKLACY----VDCMLKKVGFVNADTTFNEEKFRERTTKLDSEQVNRLVNNCK 104


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 117 FVFNEIYNILNMKTYVSDD 135
           F+F  + N LN K + +DD
Sbjct: 282 FLFRSLQNSLNGKNFNNDD 300


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/20 (35%), Positives = 15/20 (75%)

Query: 72  QNESFDNFPRRKDSIRMLVN 91
           Q ESFD   + +++++M+V+
Sbjct: 340 QRESFDVVAQNEETLQMIVS 359


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 6   HKYLNVKTIPAGHCLGSVMFLFEINNQTILYTGDFRMNPENISAFGQLHKDNMPIKINTI 65
           H Y N+  +     L    F  EI N+T+L     +   E +S      K+N  + I+ +
Sbjct: 463 HLYTNLTALRKRDVLKKGNFTIEILNKTVLAVVR-QSEEEAVSLLINFSKNNTIVDISKL 521


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query: 28  EINNQTILYTGD 39
           E+N  T++Y GD
Sbjct: 194 EVNGSTLVYIGD 205


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 83  KDSIRMLVNHIKQWVDGEPTNRIA 106
           +DS+   + H+K+  D EP   IA
Sbjct: 101 RDSVTKYLIHLKEIEDTEPILLIA 124


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.138    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,494
Number of Sequences: 429
Number of extensions: 1987
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 141
length of database: 140,377
effective HSP length: 52
effective length of query: 89
effective length of database: 118,069
effective search space: 10508141
effective search space used: 10508141
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)