BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001791-TA|BGIBMGA001791-PA|undefined (163 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomy... 27 1.0 SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 27 1.4 SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 26 2.4 SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 26 3.2 SPBC23E6.10c |||methylthioribose-1-phosphate isomerase |Schizosa... 25 4.2 SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharom... 24 9.7 SPBC16A3.14 |||mitochondrial ribosomal protein subunit S26|Schiz... 24 9.7 SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 24 9.7 SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 24 9.7 >SPAC1F5.09c |shk2|pak2|PAK-related kinase Shk2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 589 Score = 27.5 bits (58), Expect = 1.0 Identities = 12/49 (24%), Positives = 24/49 (48%) Query: 60 NKALGIDKGDQNADEKIVVMLEDQKNIRRXXXXXXXXXXLFRSSVPKFE 108 + +L I KG ++ ++ ++L+D + + R F+SS FE Sbjct: 51 SNSLSIYKGSKSESAQVTLLLKDIQKVERSKSRTFCFKLRFKSSTKNFE 99 >SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1011 Score = 27.1 bits (57), Expect = 1.4 Identities = 14/41 (34%), Positives = 22/41 (53%) Query: 22 QVRKNNGNKSTIDALIHKVVPNDKVNEVADSLTNRHFDNKA 62 +V +N NK+T A+ D VN+VA +TNR + + Sbjct: 452 RVAQNALNKTTYKAISAFNFATDMVNKVAGEITNREVEKSS 492 >SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 749 Score = 26.2 bits (55), Expect = 2.4 Identities = 14/47 (29%), Positives = 21/47 (44%) Query: 113 LVHFRSKPALMLEVDSNVVVDALSDILSSRHFQKNLDVLTKKMVMKF 159 L HFRSK + E A+S +L ++ L M++KF Sbjct: 166 LNHFRSKKIPLTEFALRYPESAVSKLLDQASIERTLRAQASAMIVKF 212 >SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 762 Score = 25.8 bits (54), Expect = 3.2 Identities = 11/25 (44%), Positives = 15/25 (60%) Query: 36 LIHKVVPNDKVNEVADSLTNRHFDN 60 L HK++ +D +E DSL R DN Sbjct: 216 LPHKILCSDAFSEAVDSLRERFVDN 240 >SPBC23E6.10c |||methylthioribose-1-phosphate isomerase |Schizosaccharomyces pombe|chr 2|||Manual Length = 359 Score = 25.4 bits (53), Expect = 4.2 Identities = 15/63 (23%), Positives = 26/63 (41%) Query: 11 STTISNAYILLQVRKNNGNKSTIDALIHKVVPNDKVNEVADSLTNRHFDNKALGIDKGDQ 70 S + +AY N G++ T L+H +P V + + D +G D+ + Sbjct: 180 SGNLEHAYCTETRPYNQGSRLTAFELVHDKIPATLVTDSTVASIMHKIDAIVVGADRVTR 239 Query: 71 NAD 73 N D Sbjct: 240 NGD 242 >SPAC31G5.15 |||phosphatidylserine decarboxylase |Schizosaccharomyces pombe|chr 1|||Manual Length = 980 Score = 24.2 bits (50), Expect = 9.7 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 36 LIHKVVPNDKVNEVADSLTNRHFDNKALGIDKGDQNADEK 75 LI K++ ND V +TN+ DN + GD++ D K Sbjct: 22 LILKIIVNDVCCWVLIKVTNKQIDNVESCL-SGDESNDSK 60 >SPBC16A3.14 |||mitochondrial ribosomal protein subunit S26|Schizosaccharomyces pombe|chr 2|||Manual Length = 277 Score = 24.2 bits (50), Expect = 9.7 Identities = 13/38 (34%), Positives = 21/38 (55%) Query: 6 DEKEYSTTISNAYILLQVRKNNGNKSTIDALIHKVVPN 43 D K+ S +NA I V +N G+K + + IH++ N Sbjct: 127 DAKKNSKYEANAAINKAVNENFGSKENLLSKIHELASN 164 >SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces pombe|chr 2|||Manual Length = 340 Score = 24.2 bits (50), Expect = 9.7 Identities = 10/41 (24%), Positives = 25/41 (60%) Query: 22 QVRKNNGNKSTIDALIHKVVPNDKVNEVADSLTNRHFDNKA 62 ++RK+ G+ ++AL V ++ + V+D T + +D+++ Sbjct: 127 KIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRS 167 >SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase Gde1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1076 Score = 24.2 bits (50), Expect = 9.7 Identities = 14/26 (53%), Positives = 14/26 (53%) Query: 118 SKPALMLEVDSNVVVDALSDILSSRH 143 S PAL LE SNV AL D S H Sbjct: 707 STPALSLEAVSNVSRTALEDAERSLH 732 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.316 0.131 0.359 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 704,249 Number of Sequences: 5004 Number of extensions: 26929 Number of successful extensions: 93 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 85 Number of HSP's gapped (non-prelim): 9 length of query: 163 length of database: 2,362,478 effective HSP length: 68 effective length of query: 95 effective length of database: 2,022,206 effective search space: 192109570 effective search space used: 192109570 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 50 (24.2 bits)
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