GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001791-TA|BGIBMGA001791-PA|undefined
         (163 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   4.8  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 39  KVVPNDKVNEVADSLT-NRHFDNKALGIDKGDQNA-DEKIVVMLEDQKNIR 87
           K +P   +  +   L  +RHFD+++L +D   Q +    I++ +   + IR
Sbjct: 613 KCIPEYIIENIVGYLQFSRHFDSRSLRVDVDAQRSIFTMILIFMGSSERIR 663


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,463
Number of Sequences: 2123
Number of extensions: 4940
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 1
length of query: 163
length of database: 516,269
effective HSP length: 59
effective length of query: 104
effective length of database: 391,012
effective search space: 40665248
effective search space used: 40665248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)