GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001791-TA|BGIBMGA001791-PA|undefined
         (163 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3108|AAF53807.1|  284|Drosophila melanogaster CG13083-P...    29   3.1  
AY119245-1|AAM51105.1|  486|Drosophila melanogaster SD20456p pro...    28   5.4  
AE014296-2200|AAN11862.1|  518|Drosophila melanogaster CG32108-P...    28   5.4  
AY061278-1|AAL28826.1|  602|Drosophila melanogaster LD19810p pro...    28   7.1  
AJ242855-1|CAB45188.1|  602|Drosophila melanogaster amphiphysin ...    28   7.1  
AF171225-1|AAD46684.1|  602|Drosophila melanogaster amphiphysin ...    28   7.1  
AE013599-1529|AAF58486.1|  602|Drosophila melanogaster CG8604-PA...    28   7.1  

>AE014134-3108|AAF53807.1|  284|Drosophila melanogaster CG13083-PA,
           isoform A protein.
          Length = 284

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/50 (28%), Positives = 23/50 (46%)

Query: 39  KVVPNDKVNEVADSLTNRHFDNKALGIDKGDQNADEKIVVMLEDQKNIRR 88
           KV+   + N V  S +    ++   G+       D K+  +L +QKNI R
Sbjct: 175 KVLQEQQRNIVGQSESLNSIEHTVHGVQVATSQVDHKLAALLNNQKNIER 224


>AY119245-1|AAM51105.1|  486|Drosophila melanogaster SD20456p
           protein.
          Length = 486

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)

Query: 49  VADSLTNRHFDNKALGI--DKGDQNADEKIVVMLE 81
           VA+SL++ H     L +  D+ D+NADEK+V+ L+
Sbjct: 141 VANSLSSVHIYALPLELSNDEIDENADEKVVIQLD 175


>AE014296-2200|AAN11862.1|  518|Drosophila melanogaster CG32108-PA
           protein.
          Length = 518

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)

Query: 49  VADSLTNRHFDNKALGI--DKGDQNADEKIVVMLE 81
           VA+SL++ H     L +  D+ D+NADEK+V+ L+
Sbjct: 173 VANSLSSVHIYALPLELANDEIDENADEKVVIQLD 207


>AY061278-1|AAL28826.1|  602|Drosophila melanogaster LD19810p
           protein.
          Length = 602

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 2   ENDKDEKEYSTTISNAYILLQVRKNNGNKSTIDALIHKVVPNDKVNEVADSLT 54
           E  K  KE  +T SNA    +   NNGN  +I+    K + ND      +++T
Sbjct: 411 EGGKQPKELPSTTSNAEAAAEAAANNGN--SIEEHKQKKLGNDTTVTATETVT 461


>AJ242855-1|CAB45188.1|  602|Drosophila melanogaster amphiphysin
           protein.
          Length = 602

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 2   ENDKDEKEYSTTISNAYILLQVRKNNGNKSTIDALIHKVVPNDKVNEVADSLT 54
           E  K  KE  +T SNA    +   NNGN  +I+    K + ND      +++T
Sbjct: 411 EGGKQPKELPSTTSNAEAAAEAAANNGN--SIEEHKQKKLGNDTTVTATETVT 461


>AF171225-1|AAD46684.1|  602|Drosophila melanogaster amphiphysin
           protein.
          Length = 602

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 2   ENDKDEKEYSTTISNAYILLQVRKNNGNKSTIDALIHKVVPNDKVNEVADSLT 54
           E  K  KE  +T SNA    +   NNGN  +I+    K + ND      +++T
Sbjct: 411 EGGKQPKELPSTTSNAEAAAEAAANNGN--SIEEHKQKKLGNDTTVTATETVT 461


>AE013599-1529|AAF58486.1|  602|Drosophila melanogaster CG8604-PA
           protein.
          Length = 602

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 2   ENDKDEKEYSTTISNAYILLQVRKNNGNKSTIDALIHKVVPNDKVNEVADSLT 54
           E  K  KE  +T SNA    +   NNGN  +I+    K + ND      +++T
Sbjct: 411 EGGKQPKELPSTTSNAEAAAEAAANNGN--SIEEHKQKKLGNDTTVTATETVT 461


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.131    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,860,862
Number of Sequences: 52641
Number of extensions: 244543
Number of successful extensions: 446
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 445
Number of HSP's gapped (non-prelim): 7
length of query: 163
length of database: 24,830,863
effective HSP length: 79
effective length of query: 84
effective length of database: 20,672,224
effective search space: 1736466816
effective search space used: 1736466816
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)