BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001790-TA|BGIBMGA001790-PA|IPR011028|Cyclin-like, IPR006671|Cyclin, N-terminal (361 letters) Database: fruitfly 52,641 sequences; 24,830,863 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p pro... 201 1e-51 AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-P... 201 1e-51 AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-P... 201 1e-51 AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-P... 201 1e-51 AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-P... 201 1e-51 AE014297-4769|AAN14276.1| 282|Drosophila melanogaster CG11525-P... 152 6e-37 AY119489-1|AAM50143.1| 455|Drosophila melanogaster GH08155p pro... 33 0.61 AE014134-2715|AAF53534.2| 455|Drosophila melanogaster CG5888-PA... 33 0.61 U41808-1|AAC47016.1| 452|Drosophila melanogaster Cyclin D protein. 31 3.3 AY069509-1|AAL39654.1| 481|Drosophila melanogaster LD22957p pro... 31 3.3 AF260583-1|AAG13285.1| 481|Drosophila melanogaster cyclin D pro... 31 3.3 AE014298-2283|AAF48537.1| 481|Drosophila melanogaster CG9096-PC... 31 3.3 AE014298-2282|AAN09375.1| 481|Drosophila melanogaster CG9096-PB... 31 3.3 AE014298-2281|AAN09374.1| 481|Drosophila melanogaster CG9096-PA... 31 3.3 AE014297-4074|AAF56671.1| 866|Drosophila melanogaster CG5882-PA... 29 7.5 >AY058720-1|AAL13949.1| 566|Drosophila melanogaster LD46284p protein. Length = 566 Score = 201 bits (491), Expect = 1e-51 Identities = 123/339 (36%), Positives = 182/339 (53%), Gaps = 19/339 (5%) Query: 28 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGAAHVLRCLKVWFDLPADVL 87 ++ +LY TL EY +L+ K L LP ES EVT G RDG+A+VLRCLK+W++LP+DVL Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294 Query: 88 IGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQSACT 147 A++L DRFL +M V+P H+ C++V+ +++I + + + E+LV+ISQ CT Sbjct: 295 FSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDL-----KPIPAEDLVTISQCGCT 349 Query: 148 AGDVSRMSRVIQDKLGLARGTVSVTAXXXXXXXXXXXXMHAD--AGDV------LAQESE 199 AGD+ RM+ VI +KLG+ G +T+ A GD L + E Sbjct: 350 AGDLERMAGVIANKLGVQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFKFYQQLIKLEE 409 Query: 200 LVNLLEIAVCDATCANARTSELALVLLFHKLEKQLVEWSEKGMTVPEKVFYMYDFARQLQ 259 L N LEI +CD S LALVL+ L+ + E +G PE + +++++ LQ Sbjct: 410 LENRLEILMCDVKTTVITPSTLALVLICLHLDFHIKESYTRGS--PE-LKHVFEYILFLQ 466 Query: 260 IHCHMSDASLSXXXXXXXXXXQRYESRSAQPLRQRLVWRLSERTLKVLRPTDRLTSLLPT 319 + + D + Y ++ P +QRLVW+LS RTL+VLRP +R +S LPT Sbjct: 467 QYMRIPDRVFTCGFSIVSGILSHYNGQNKAPYKQRLVWKLSSRTLRVLRPINRFSSDLPT 526 Query: 320 IEEQHFAVEATPXXXXXXXXXXXXXXXXDWPRSPLLPVY 358 IEE A DWP SP++P++ Sbjct: 527 IEEG--IPNALDDGLRSRTESISSEEEEDWPTSPIIPIF 563 >AE014297-4768|AAF57171.2| 566|Drosophila melanogaster CG11525-PD, isoform D protein. Length = 566 Score = 201 bits (491), Expect = 1e-51 Identities = 123/339 (36%), Positives = 182/339 (53%), Gaps = 19/339 (5%) Query: 28 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGAAHVLRCLKVWFDLPADVL 87 ++ +LY TL EY +L+ K L LP ES EVT G RDG+A+VLRCLK+W++LP+DVL Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294 Query: 88 IGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQSACT 147 A++L DRFL +M V+P H+ C++V+ +++I + + + E+LV+ISQ CT Sbjct: 295 FSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDL-----KPIPAEDLVTISQCGCT 349 Query: 148 AGDVSRMSRVIQDKLGLARGTVSVTAXXXXXXXXXXXXMHAD--AGDV------LAQESE 199 AGD+ RM+ VI +KLG+ G +T+ A GD L + E Sbjct: 350 AGDLERMAGVIANKLGVQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFKFYQQLIKLEE 409 Query: 200 LVNLLEIAVCDATCANARTSELALVLLFHKLEKQLVEWSEKGMTVPEKVFYMYDFARQLQ 259 L N LEI +CD S LALVL+ L+ + E +G PE + +++++ LQ Sbjct: 410 LENRLEILMCDVKTTVITPSTLALVLICLHLDFHIKESYTRGS--PE-LKHVFEYILFLQ 466 Query: 260 IHCHMSDASLSXXXXXXXXXXQRYESRSAQPLRQRLVWRLSERTLKVLRPTDRLTSLLPT 319 + + D + Y ++ P +QRLVW+LS RTL+VLRP +R +S LPT Sbjct: 467 QYMRIPDRVFTCGFSIVSGILSHYNGQNKAPYKQRLVWKLSSRTLRVLRPINRFSSDLPT 526 Query: 320 IEEQHFAVEATPXXXXXXXXXXXXXXXXDWPRSPLLPVY 358 IEE A DWP SP++P++ Sbjct: 527 IEEG--IPNALDDGLRSRTESISSEEEEDWPTSPIIPIF 563 >AE014297-4767|AAF57169.2| 566|Drosophila melanogaster CG11525-PC, isoform C protein. Length = 566 Score = 201 bits (491), Expect = 1e-51 Identities = 123/339 (36%), Positives = 182/339 (53%), Gaps = 19/339 (5%) Query: 28 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGAAHVLRCLKVWFDLPADVL 87 ++ +LY TL EY +L+ K L LP ES EVT G RDG+A+VLRCLK+W++LP+DVL Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294 Query: 88 IGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQSACT 147 A++L DRFL +M V+P H+ C++V+ +++I + + + E+LV+ISQ CT Sbjct: 295 FSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDL-----KPIPAEDLVTISQCGCT 349 Query: 148 AGDVSRMSRVIQDKLGLARGTVSVTAXXXXXXXXXXXXMHAD--AGDV------LAQESE 199 AGD+ RM+ VI +KLG+ G +T+ A GD L + E Sbjct: 350 AGDLERMAGVIANKLGVQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFKFYQQLIKLEE 409 Query: 200 LVNLLEIAVCDATCANARTSELALVLLFHKLEKQLVEWSEKGMTVPEKVFYMYDFARQLQ 259 L N LEI +CD S LALVL+ L+ + E +G PE + +++++ LQ Sbjct: 410 LENRLEILMCDVKTTVITPSTLALVLICLHLDFHIKESYTRGS--PE-LKHVFEYILFLQ 466 Query: 260 IHCHMSDASLSXXXXXXXXXXQRYESRSAQPLRQRLVWRLSERTLKVLRPTDRLTSLLPT 319 + + D + Y ++ P +QRLVW+LS RTL+VLRP +R +S LPT Sbjct: 467 QYMRIPDRVFTCGFSIVSGILSHYNGQNKAPYKQRLVWKLSSRTLRVLRPINRFSSDLPT 526 Query: 320 IEEQHFAVEATPXXXXXXXXXXXXXXXXDWPRSPLLPVY 358 IEE A DWP SP++P++ Sbjct: 527 IEEG--IPNALDDGLRSRTESISSEEEEDWPTSPIIPIF 563 >AE014297-4766|AAF57170.2| 566|Drosophila melanogaster CG11525-PB, isoform B protein. Length = 566 Score = 201 bits (491), Expect = 1e-51 Identities = 123/339 (36%), Positives = 182/339 (53%), Gaps = 19/339 (5%) Query: 28 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGAAHVLRCLKVWFDLPADVL 87 ++ +LY TL EY +L+ K L LP ES EVT G RDG+A+VLRCLK+W++LP+DVL Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294 Query: 88 IGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQSACT 147 A++L DRFL +M V+P H+ C++V+ +++I + + + E+LV+ISQ CT Sbjct: 295 FSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDL-----KPIPAEDLVTISQCGCT 349 Query: 148 AGDVSRMSRVIQDKLGLARGTVSVTAXXXXXXXXXXXXMHAD--AGDV------LAQESE 199 AGD+ RM+ VI +KLG+ G +T+ A GD L + E Sbjct: 350 AGDLERMAGVIANKLGVQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFKFYQQLIKLEE 409 Query: 200 LVNLLEIAVCDATCANARTSELALVLLFHKLEKQLVEWSEKGMTVPEKVFYMYDFARQLQ 259 L N LEI +CD S LALVL+ L+ + E +G PE + +++++ LQ Sbjct: 410 LENRLEILMCDVKTTVITPSTLALVLICLHLDFHIKESYTRGS--PE-LKHVFEYILFLQ 466 Query: 260 IHCHMSDASLSXXXXXXXXXXQRYESRSAQPLRQRLVWRLSERTLKVLRPTDRLTSLLPT 319 + + D + Y ++ P +QRLVW+LS RTL+VLRP +R +S LPT Sbjct: 467 QYMRIPDRVFTCGFSIVSGILSHYNGQNKAPYKQRLVWKLSSRTLRVLRPINRFSSDLPT 526 Query: 320 IEEQHFAVEATPXXXXXXXXXXXXXXXXDWPRSPLLPVY 358 IEE A DWP SP++P++ Sbjct: 527 IEEG--IPNALDDGLRSRTESISSEEEEDWPTSPIIPIF 563 >AE014297-4765|AAF57168.2| 566|Drosophila melanogaster CG11525-PA, isoform A protein. Length = 566 Score = 201 bits (491), Expect = 1e-51 Identities = 123/339 (36%), Positives = 182/339 (53%), Gaps = 19/339 (5%) Query: 28 SAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGAAHVLRCLKVWFDLPADVL 87 ++ +LY TL EY +L+ K L LP ES EVT G RDG+A+VLRCLK+W++LP+DVL Sbjct: 236 TSDELYETLKEYDVLQDKFHTVLLLPKESRR-EVTAGGRDGSAYVLRCLKMWYELPSDVL 294 Query: 88 IGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQSACT 147 A++L DRFL +M V+P H+ C++V+ +++I + + + E+LV+ISQ CT Sbjct: 295 FSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDL-----KPIPAEDLVTISQCGCT 349 Query: 148 AGDVSRMSRVIQDKLGLARGTVSVTAXXXXXXXXXXXXMHAD--AGDV------LAQESE 199 AGD+ RM+ VI +KLG+ G +T+ A GD L + E Sbjct: 350 AGDLERMAGVIANKLGVQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFKFYQQLIKLEE 409 Query: 200 LVNLLEIAVCDATCANARTSELALVLLFHKLEKQLVEWSEKGMTVPEKVFYMYDFARQLQ 259 L N LEI +CD S LALVL+ L+ + E +G PE + +++++ LQ Sbjct: 410 LENRLEILMCDVKTTVITPSTLALVLICLHLDFHIKESYTRGS--PE-LKHVFEYILFLQ 466 Query: 260 IHCHMSDASLSXXXXXXXXXXQRYESRSAQPLRQRLVWRLSERTLKVLRPTDRLTSLLPT 319 + + D + Y ++ P +QRLVW+LS RTL+VLRP +R +S LPT Sbjct: 467 QYMRIPDRVFTCGFSIVSGILSHYNGQNKAPYKQRLVWKLSSRTLRVLRPINRFSSDLPT 526 Query: 320 IEEQHFAVEATPXXXXXXXXXXXXXXXXDWPRSPLLPVY 358 IEE A DWP SP++P++ Sbjct: 527 IEEG--IPNALDDGLRSRTESISSEEEEDWPTSPIIPIF 563 >AE014297-4769|AAN14276.1| 282|Drosophila melanogaster CG11525-PE, isoform E protein. Length = 282 Score = 152 bits (369), Expect = 6e-37 Identities = 96/289 (33%), Positives = 148/289 (51%), Gaps = 18/289 (6%) Query: 78 VWFDLPADVLIGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEE 137 +W++LP+DVL A++L DRFL +M V+P H+ C++V+ +++I + + + E+ Sbjct: 1 MWYELPSDVLFSAMSLVDRFLDRMAVKPKHMACMSVASFHLAIKQLDLKP-----IPAED 55 Query: 138 LVSISQSACTAGDVSRMSRVIQDKLGLARGTVSVTAXXXXXXXXXXXXMHAD--AGDV-- 193 LV+ISQ CTAGD+ RM+ VI +KLG+ G +T+ A GD Sbjct: 56 LVTISQCGCTAGDLERMAGVIANKLGVQMGHAPITSVSYLRIYYALFRNLAKEIGGDFFK 115 Query: 194 ----LAQESELVNLLEIAVCDATCANARTSELALVLLFHKLEKQLVEWSEKGMTVPEKVF 249 L + EL N LEI +CD S LALVL+ L+ + E +G PE + Sbjct: 116 FYQQLIKLEELENRLEILMCDVKTTVITPSTLALVLICLHLDFHIKESYTRGS--PE-LK 172 Query: 250 YMYDFARQLQIHCHMSDASLSXXXXXXXXXXQRYESRSAQPLRQRLVWRLSERTLKVLRP 309 +++++ LQ + + D + Y ++ P +QRLVW+LS RTL+VLRP Sbjct: 173 HVFEYILFLQQYMRIPDRVFTCGFSIVSGILSHYNGQNKAPYKQRLVWKLSSRTLRVLRP 232 Query: 310 TDRLTSLLPTIEEQHFAVEATPXXXXXXXXXXXXXXXXDWPRSPLLPVY 358 +R +S LPTIEE A DWP SP++P++ Sbjct: 233 INRFSSDLPTIEEG--IPNALDDGLRSRTESISSEEEEDWPTSPIIPIF 279 >AY119489-1|AAM50143.1| 455|Drosophila melanogaster GH08155p protein. Length = 455 Score = 33.1 bits (72), Expect = 0.61 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Query: 190 AGDVLAQESELVNLLEIAVCDATCANARTSELALVLLFHKLEKQLVEWSEKGMTVPEKVF 249 +G + A++S+L +L+ CDA ++ S L+H E Q +E G VP ++F Sbjct: 204 SGAIFAKQSKLKHLM--IDCDAKNSSVEMSAFGPQELWHMTELQSIELFNCGDNVPTELF 261 Query: 250 YMYDFARQLQIHCHMS 265 +M + + I ++S Sbjct: 262 WMSEQLAYIGIRSNIS 277 >AE014134-2715|AAF53534.2| 455|Drosophila melanogaster CG5888-PA protein. Length = 455 Score = 33.1 bits (72), Expect = 0.61 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%) Query: 190 AGDVLAQESELVNLLEIAVCDATCANARTSELALVLLFHKLEKQLVEWSEKGMTVPEKVF 249 +G + A++S+L +L+ CDA ++ S L+H E Q +E G VP ++F Sbjct: 204 SGAIFAKQSKLKHLM--IDCDAKNSSVEMSAFGPQELWHMTELQSIELFNCGDNVPTELF 261 Query: 250 YMYDFARQLQIHCHMS 265 +M + + I ++S Sbjct: 262 WMSEQLAYIGIRSNIS 277 >U41808-1|AAC47016.1| 452|Drosophila melanogaster Cyclin D protein. Length = 452 Score = 30.7 bits (66), Expect = 3.3 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Query: 85 DVLIGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQS 144 +V++ A+N DRFL+ VR + + +C+ ++ R R +S++ LV + + Sbjct: 176 EVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLA---SKLREPSCRALSVDLLVVYTDN 232 Query: 145 ACTAGDVSRMSRVIQDKLG 163 + D+ + + +LG Sbjct: 233 SIYKDDLIKWELYVLSRLG 251 >AY069509-1|AAL39654.1| 481|Drosophila melanogaster LD22957p protein. Length = 481 Score = 30.7 bits (66), Expect = 3.3 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Query: 85 DVLIGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQS 144 +V++ A+N DRFL+ VR + + +C+ ++ R R +S++ LV + + Sbjct: 205 EVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLA---SKLREPSCRALSVDLLVVYTDN 261 Query: 145 ACTAGDVSRMSRVIQDKLG 163 + D+ + + +LG Sbjct: 262 SIYKDDLIKWELYVLSRLG 280 >AF260583-1|AAG13285.1| 481|Drosophila melanogaster cyclin D protein. Length = 481 Score = 30.7 bits (66), Expect = 3.3 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Query: 85 DVLIGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQS 144 +V++ A+N DRFL+ VR + + +C+ ++ R R +S++ LV + + Sbjct: 205 EVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLA---SKLREPSCRALSVDLLVVYTDN 261 Query: 145 ACTAGDVSRMSRVIQDKLG 163 + D+ + + +LG Sbjct: 262 SIYKDDLIKWELYVLSRLG 280 >AE014298-2283|AAF48537.1| 481|Drosophila melanogaster CG9096-PC, isoform C protein. Length = 481 Score = 30.7 bits (66), Expect = 3.3 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Query: 85 DVLIGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQS 144 +V++ A+N DRFL+ VR + + +C+ ++ R R +S++ LV + + Sbjct: 205 EVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLA---SKLREPSCRALSVDLLVVYTDN 261 Query: 145 ACTAGDVSRMSRVIQDKLG 163 + D+ + + +LG Sbjct: 262 SIYKDDLIKWELYVLSRLG 280 >AE014298-2282|AAN09375.1| 481|Drosophila melanogaster CG9096-PB, isoform B protein. Length = 481 Score = 30.7 bits (66), Expect = 3.3 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Query: 85 DVLIGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQS 144 +V++ A+N DRFL+ VR + + +C+ ++ R R +S++ LV + + Sbjct: 205 EVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLA---SKLREPSCRALSVDLLVVYTDN 261 Query: 145 ACTAGDVSRMSRVIQDKLG 163 + D+ + + +LG Sbjct: 262 SIYKDDLIKWELYVLSRLG 280 >AE014298-2281|AAN09374.1| 481|Drosophila melanogaster CG9096-PA, isoform A protein. Length = 481 Score = 30.7 bits (66), Expect = 3.3 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 3/79 (3%) Query: 85 DVLIGAINLFDRFLTKMKVRPCHVPCITVSCMNISIDEYAARTNIKRTVSIEELVSISQS 144 +V++ A+N DRFL+ VR + + +C+ ++ R R +S++ LV + + Sbjct: 205 EVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLA---SKLREPSCRALSVDLLVVYTDN 261 Query: 145 ACTAGDVSRMSRVIQDKLG 163 + D+ + + +LG Sbjct: 262 SIYKDDLIKWELYVLSRLG 280 >AE014297-4074|AAF56671.1| 866|Drosophila melanogaster CG5882-PA protein. Length = 866 Score = 29.5 bits (63), Expect = 7.5 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Query: 19 ASTSRDDVDSAQQLYATLNEYLLLEQKSQPKLRLPAESESGEVTTGARDGAAHVLR 74 AS ++ AQQLYA L E++L P ++ AE S + A+D VL+ Sbjct: 740 ASEQERALNEAQQLYAALREFML----KLPSHKVRAELNSVKANLSAKDRKLKVLK 791 Database: fruitfly Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 24,830,863 Number of sequences in database: 52,641 Lambda K H 0.320 0.131 0.387 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,876,867 Number of Sequences: 52641 Number of extensions: 468597 Number of successful extensions: 1068 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 1033 Number of HSP's gapped (non-prelim): 15 length of query: 361 length of database: 24,830,863 effective HSP length: 86 effective length of query: 275 effective length of database: 20,303,737 effective search space: 5583527675 effective search space used: 5583527675 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 62 (29.1 bits)
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