BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001789-TA|BGIBMGA001789-PA|IPR011011|Zinc finger, FYVE/PHD-type, IPR001841|Zinc finger, RING-type, IPR001965|Zinc finger, PHD-type (760 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 9e-22 SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) 42 0.002 SB_14893| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.21 SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) 35 0.28 SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.37 SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 34 0.37 SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.49 SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.64 SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.85 SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.85 SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 33 1.1 SB_59600| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1.5e-05) 31 2.6 SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4 SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 31 3.4 SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 31 4.5 SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 31 4.5 SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058) 31 4.5 SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 31 4.5 SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 31 4.5 SB_24365| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.5 SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.5 SB_29786| Best HMM Match : I-set (HMM E-Value=0) 30 6.0 SB_22170| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0 SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0 SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34) 30 6.0 SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0 SB_31097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.9 SB_7895| Best HMM Match : uDENN (HMM E-Value=5.7e-25) 30 7.9 SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.9 >SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 975 Score = 102 bits (245), Expect = 9e-22 Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 7/130 (5%) Query: 12 SATLVTEDIIPCAICGREVDDEVLYGKIYAIG--DIQCHYFCVLLSCCLVQKGRETDGLF 69 +++ V D C C DDE YGK + +I H +C+L + L Q G + +G Sbjct: 121 ASSSVKGDSTSCVFCLSSADDEDKYGKFLSKEGENITVHQYCLLFASGLAQNGGDDEGFD 180 Query: 70 GFLYRDILAEIERAKKHKCSYCSRGGATLGCSVSQCRKQFHLPCGREKNAVSLFYGNYKS 129 GFL +DI E++RAK+ KCSYC GA++GC +C K+FH CGR+K A+ F+G++ Sbjct: 181 GFLCKDIDTELKRAKRLKCSYCHVSGASIGCVAVKCSKKFHFGCGRDKQALFQFFGSF-- 238 Query: 130 YCQQHVPKQK 139 H P QK Sbjct: 239 ---NHRPTQK 245 Score = 77.0 bits (181), Expect = 5e-14 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 11/128 (8%) Query: 179 CLICYEEVEPYPGVQTFWPPCCARDAWFHRRCLQRMALTAGMHYLKCPLCNDKERFHEAV 238 C IC V+ + +T PCC R +WFHR C+QR A +G+H+ +C +CN+ + F + + Sbjct: 258 CPICLMSVDAHDLYETLKSPCCKR-SWFHRECVQRQATASGIHFFRCAVCNNIQDFQDEM 316 Query: 239 ISQGYYIPDQDAAWELERNAYAEIYERNLRCDAEVCECPQGRDHDSNEGEWDLQTCLLCG 298 + G +IPD+ + I+ + C A + + R +W ++ C +CG Sbjct: 317 LRMGIHIPDR---------THRYIFRKFSDCTANLIAFNEVRVGGVG-CKWKIRLCDVCG 366 Query: 299 WSGRHARC 306 G H C Sbjct: 367 QCGTHKIC 374 >SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) Length = 1133 Score = 41.9 bits (94), Expect = 0.002 Identities = 14/42 (33%), Positives = 23/42 (54%) Query: 87 KCSYCSRGGATLGCSVSQCRKQFHLPCGREKNAVSLFYGNYK 128 +C+YC+R GA++ C +C K +H PC + L N + Sbjct: 359 RCNYCNRFGASISCDARECGKVYHYPCALVSGSFQLIVTNVR 400 >SB_14893| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 735 Score = 35.1 bits (77), Expect = 0.21 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Query: 282 HDSNEGEWDLQTCLLCGWSGR-HARCGPAPPVCASCRPAAP 321 +D NE ++ L TC++C GR H PPV A+ +P P Sbjct: 156 NDLNESDYQLYTCVICTHYGRSHHSIRLEPPVYATTKPVVP 196 >SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) Length = 674 Score = 34.7 bits (76), Expect = 0.28 Identities = 22/101 (21%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 611 KETLSDENVGMDVESFKNCYLNEVDRHFVNNVPGEHGXXXXXXXXXXXXARIDKKKKRDH 670 K ++ +++V +DV KN L +R +V + ++++K+ + Sbjct: 360 KSSVKEKDVRLDVMEQKNARL---ERDLEKSVDSKEELASELSSKKLEVSKLEKELRTAM 416 Query: 671 KELNKSKVYRKNERQKMKIRFKTRIKLK--VCESKDKDLKQ 709 ++L+ SKV ++NE+ + ++ K I+ K E ++ LK+ Sbjct: 417 QDLDNSKVQKENEKSETILKLKADIQAKDEQIEELERQLKE 457 >SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1168 Score = 34.3 bits (75), Expect = 0.37 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 3/91 (3%) Query: 662 IDKKKKRDHKELNKSKVYRK-NERQKMKIRFKTRIKLKVCESKD--KDLKQYVLSNVNNV 718 + +KK + K +++ KV +K ++RQ+ ++ K K + D K+L+QY +S+ Sbjct: 52 VAQKKDKLSKRVDQGKVIKKLSKRQRKRLEKIVEKKQKKAKRSDLFKELEQYAVSDRELA 111 Query: 719 VVRPQKEVGPIKRKYNKQEKSSDNLVQTSIQ 749 ++ +G + RK E + Q +IQ Sbjct: 112 LMSSSTSIGQLDRKRKFTESEGVPINQHAIQ 142 >SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) Length = 1447 Score = 34.3 bits (75), Expect = 0.37 Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 5/102 (4%) Query: 662 IDKKKKRDHKELNKSKVYRKNERQKMKIRFK-TRIKLKVCESKDKDLKQYVLSNVNNVVV 720 ++ + K++ ++L K+KV + + +K+K+ TR KL+ E+K + L Q N+ + + Sbjct: 518 LEDEIKKEKEQLKKNKVAQDEQGKKLKMEVSMTRQKLQEAEAKIRSL-QEECKNLESQLN 576 Query: 721 RPQKEVGPIKRKYNKQEKSSDNLV---QTSIQKFFAVKNCKT 759 ++ I+ K K +NL+ +TS QK + N T Sbjct: 577 MANTDLKNIREKEFKLNSEKENLLTEGKTSSQKLQSKINTLT 618 >SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2870 Score = 33.9 bits (74), Expect = 0.49 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 269 CDAEVCECPQGRDHDSNEGEWDLQTCLLCGWSGRHARCGPAPPVC--ASCRPAAPA 322 C + CPQ D E Q CLL +G+H+ P C + C P PA Sbjct: 1363 CSNALSSCPQSCSGDHCGAECPTQCCLLAD-NGQHSSTASCPSACSPSGCNPDCPA 1417 >SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 397 Score = 33.5 bits (73), Expect = 0.64 Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Query: 665 KKKRDHKELNKSKVYRKNERQKMKIRFKTRIK-----LKVCESKDKDLKQYVLSNVNNVV 719 K K H + + KVYR +K + +K LK+ +++ ++ K + + + Sbjct: 121 KDKLGHYDDLEDKVYRYERERKSLTKENKELKEELEDLKISKNELEEKKLGLEKKKTSEI 180 Query: 720 VRPQKEVGPIKRKYNKQEKSSDNLVQTSIQKFFAVKNCKT 759 +KE ++KYN K +NLV +KF ++ K+ Sbjct: 181 EDLEKERNEAEKKYNSLRKEKENLVSELTKKFEMLEGQKS 220 >SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 131 Score = 33.1 bits (72), Expect = 0.85 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 664 KKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCESKDKDLKQYVLSNVNNVVVRPQ 723 +KKK+ K+ K K +KN++ K K + K ++K K E + K N + + Sbjct: 24 QKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEAENEEEKIEETE 83 Query: 724 KEVGPIKRKYNKQEK 738 KE + K ++EK Sbjct: 84 KEKDE-EEKIEEEEK 97 >SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1203 Score = 33.1 bits (72), Expect = 0.85 Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Query: 595 TPVKVK-KCAFKFSPLDKETLSDENVGMDVESFKNCYLNEVDRHFVNNVPGEHGXXXXXX 653 TP + K K + K + + T+ + G++ ++ NCYL+ +R+ + G+ Sbjct: 222 TPYRKKMKLSLKVNKEQQNTMEGQKAGLNTQTESNCYLSTTERYDIRGAYGDSTQQSSTD 281 Query: 654 XXXXXXARIDKKKKRDHKELNKSKVYRKNE 683 KK+ D + + K + +K E Sbjct: 282 IWFVCLKGDGKKRMEDFERVIKPEDIQKFE 311 >SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) Length = 1866 Score = 32.7 bits (71), Expect = 1.1 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Query: 661 RIDKKKKRDHKELNKSKVYRKNERQKMKIRFK-TRIKLKVCESKDKDLKQYVLSNVNNVV 719 +++K+KK K+L K R+ E+QK ++R K + K K E K+ K+ +L Sbjct: 930 QLEKEKKEKEKKLLIEKEKREKEKQKERLREKEEKEKQKEAERAKKE-KERLLQEDKLHE 988 Query: 720 VRPQKEVGPIKRKYNKQEKSSDNLVQ 745 + KRK K+++ D V+ Sbjct: 989 KEEKDRKDKEKRKVEKEKREKDKQVE 1014 Score = 31.9 bits (69), Expect = 2.0 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%) Query: 375 ENKQGIMKVTRQDLNLKPPRKPQYCLI-KPTVLKNIEQNLLSPIKLLEKGVQEKINSEEI 433 E ++ K +Q L + K + LI K K ++ L + EK + + +E Sbjct: 918 EREEKERKRRQQQLEKEKKEKEKKLLIEKEKREKEKQKERLREKEEKEKQKEAERAKKEK 977 Query: 434 DNVIIDEKILEEVREKFRKPKPLCVKRKIVDEILQGLFDTVLKESKQ--KEIIKKWCSPK 491 + ++ ++K L E EK RK K KRK+ E + V KE K K + K+ S K Sbjct: 978 ERLLQEDK-LHEKEEKDRKDKE---KRKVEKEKREK-DKQVEKEKKDSLKRVKKRKDSDK 1032 Query: 492 KREIKEETEPQDI 504 +R++KE+ E Q + Sbjct: 1033 ERKVKEKEEEQKV 1045 >SB_59600| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1.5e-05) Length = 1119 Score = 31.5 bits (68), Expect = 2.6 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Query: 461 KIVDEILQGLFDTVLKESKQKEIIKKWC---SPKKREIKEETEPQDIISEDTAVARNP 515 K ++ + +G DT LK ++ WC S K+R + E + Q I + VA+NP Sbjct: 822 KKLERLFKGYIDTFLKYKQEASGWPAWCDTDSDKQRYLDEYEQHQGIRLDKEKVAKNP 879 >SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 311 Score = 31.1 bits (67), Expect = 3.4 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 7/57 (12%) Query: 179 CLICYEEVEPYPGVQTFWPPCCARDA--WFHRRCLQRM--ALTAG--MHYLKCPLCN 229 C +C+ E P V + PC R W H+ CLQR AG + CP CN Sbjct: 25 CWVCFATDEDEPSV-AWVKPCLCRGTTKWVHQSCLQRWIDEKQAGNSAATVSCPQCN 80 >SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) Length = 1265 Score = 31.1 bits (67), Expect = 3.4 Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 6/158 (3%) Query: 363 TDPKNVPSTSTAENKQGIMKVTRQDLNLKPPRKPQYCLIKPTVLKNIEQN---LLSPIKL 419 T +N ++ T + ++ I TRQ+ + PP+ I ++N + + L++P ++ Sbjct: 474 TSVQNGSTSPTPDTEEIITADTRQETEMAPPQNKISEPIPEDAVENNKTSTAPLVTPTEV 533 Query: 420 LEKGVQEKINSEEIDNVIIDEKILEEVREKFRKPKPLCVKRKIVDEILQGLFDTVLKESK 479 E Q + E N +I+E + E + P +K + Q + D K+ K Sbjct: 534 DEMVKQSAVVKETKPNNVIEETVESETTVNGLESDPERLKSSQGTTVDQSVKDVPKKKKK 593 Query: 480 QKEIIKKWCSPKKREIKEETEPQDIISEDTAVARNPST 517 K+ ++ +KR K + + V++ P T Sbjct: 594 GKQ---RFQEMEKRSDKADLMDAYTERPEKEVSKEPQT 628 >SB_37351| Best HMM Match : DEAD (HMM E-Value=0) Length = 688 Score = 30.7 bits (66), Expect = 4.5 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Query: 660 ARIDKKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCESKDKDLKQYVLSNVNNVV 719 +R DK+ K + KE+ KSK + + +K K++ + +V + K K K + Sbjct: 7 SRKDKEVKDEEKEIRKSKEKVEKKTKKRKLKESAEEQPEVSKKKRKTAKDESEFDEGVEP 66 Query: 720 VRPQKEVGPIKRKYNKQEKSSDNLVQTSIQKFFAVK 755 Q+E G K+ +K+ DNL I F ++ Sbjct: 67 SVAQRE-GDFS-KFRISQKTIDNLEDRGITYLFPIQ 100 >SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) Length = 1091 Score = 30.7 bits (66), Expect = 4.5 Identities = 20/65 (30%), Positives = 25/65 (38%) Query: 551 PQKLKKLDIQXXXXXXXXXXXXXXXXDVKKMDTQCDRSEGVDLKTPVKVKKCAFKFSPLD 610 P+KL+ L KKM TQ + EG + P K + A K S Sbjct: 808 PEKLEHLQDALESMQYAGEHLEMAEGKRKKMSTQASKREGAQTREPKKWENIAQKLSKRL 867 Query: 611 KETLS 615 KE LS Sbjct: 868 KEALS 872 >SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058) Length = 1002 Score = 30.7 bits (66), Expect = 4.5 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Query: 350 PVMPSRMSLRRTKTDPKNV-PSTSTAENKQGIMKVTRQDLNLKPPRKPQYCLIKPTVLKN 408 P++ S +++R P NV P + N I + LN++P L+KP + Sbjct: 574 PIVVSPLNVRPIMVSPPNVRPIVVSPPN---IRPIVVSPLNVRPIMVDP--LVKPPKNLH 628 Query: 409 IEQNLLSPIKLLEKGVQEKINSEEIDNVIIDEKILEE 445 + L+S ++ EK +Q SEE I+ ++I EE Sbjct: 629 VYDMLVSLVEAEEKCIQRVRLSEEEVKEILQQRIKEE 665 >SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) Length = 208 Score = 30.7 bits (66), Expect = 4.5 Identities = 20/80 (25%), Positives = 37/80 (46%) Query: 373 TAENKQGIMKVTRQDLNLKPPRKPQYCLIKPTVLKNIEQNLLSPIKLLEKGVQEKINSEE 432 + + K G++ Q ++ K Q+ ++NI+QN+ + L+KG+QE E Sbjct: 36 SVDEKVGVVGQHVQSVDEKVGVVGQHVQSLDEKVQNIDQNVAKGFQNLQKGIQEIKKGAE 95 Query: 433 IDNVIIDEKILEEVREKFRK 452 DN + L + E +K Sbjct: 96 RDNAAAKHEELVKQEEAIKK 115 >SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) Length = 3107 Score = 30.7 bits (66), Expect = 4.5 Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 5/125 (4%) Query: 586 DRSEGVDLKTPVKVKKCAFKFSPLDKETLS-DENVGMDVESFKNCYLNEVDRH---FVNN 641 +R + KTP + K A++ L +++ + +E + ++++ KN D H N Sbjct: 1330 ERDKQAAEKTPDEAAKKAYEIETLHQQSKAREERLKQELQASKNKIAKIEDDHKKIHQQN 1389 Query: 642 VPGEHGXXXXXXXXXXXXARIDKKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCE 701 + +H A + +K + + KE+ +S + +++R++ +K KV Sbjct: 1390 IERDHENKMLSKRVADLTA-LKEKFEHEKKEMKQSLREAQGRESDLEVRYEYEVKEKVAL 1448 Query: 702 SKDKD 706 + D Sbjct: 1449 QQQLD 1453 >SB_24365| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 532 Score = 30.7 bits (66), Expect = 4.5 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 663 DKKKKRDHKELNKSKVYRKNE-RQKMKIRFKTRIKLKVCESKDKDLKQY 710 DK +K D EL + + + KN+ ++K K + K +IK K + + +QY Sbjct: 437 DKDEKEDEDELEEKEDWSKNKTKKKTKEKTKEKIKSKTLQRRGLFKRQY 485 >SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2193 Score = 30.7 bits (66), Expect = 4.5 Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Query: 663 DKKKKRDHKELNKSKVYRKNERQKMKIRF-KTRIKLKVCESKDKDLKQYVLSNVNNVVVR 721 +K +RD EL K + E ++ + K + +L ++ DLK L++ NN +++ Sbjct: 135 NKTLERDVDELLDDKKDLQEELADLRPKVEKLQTQLDATTTQRDDLKN-ALADANNTILK 193 Query: 722 PQKEVGPIKRKYNKQEKSSDNL 743 ++E+ + + ++QEK++ +L Sbjct: 194 LKEELNNAEMRASQQEKANSSL 215 >SB_29786| Best HMM Match : I-set (HMM E-Value=0) Length = 6300 Score = 30.3 bits (65), Expect = 6.0 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 25/160 (15%) Query: 368 VPSTSTAENKQGIMKVTRQDLN---LKPPR-KPQYCLIKPTVLKNIEQNLLSPIKLLEKG 423 V + E K ++TR++ +KP + KP KP K + + P+ EK Sbjct: 5386 VSAEKVVEEKPLEKQITRKEKTAEEVKPKKGKPMDREAKPLEEKPLVEEKELPVSA-EKA 5444 Query: 424 VQEKINSEEIDNVIIDEKILEEVREKFRKP----------KPLCVKRKIVDEILQGLFDT 473 V+EK + I EK +EEVR K KP KPL ++++ + + + + Sbjct: 5445 VEEKPLEKPITR---KEKKVEEVRPKTEKPTEREAKSLKEKPLVEEKELTVSVEKAVEEK 5501 Query: 474 VL------KESKQKEIIKKWCSPKKREIKEETEPQDIISE 507 L KE K +E+ K P +RE K E + ++ E Sbjct: 5502 PLEKPITRKEKKVEEVKPKKEKPTEREAK-PLEEKPLVEE 5540 >SB_22170| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 391 Score = 30.3 bits (65), Expect = 6.0 Identities = 16/60 (26%), Positives = 30/60 (50%) Query: 460 RKIVDEILQGLFDTVLKESKQKEIIKKWCSPKKREIKEETEPQDIISEDTAVARNPSTPV 519 ++I+DEIL+ D L ES+ + + W + +++ T + S D V + TP+ Sbjct: 251 QRIIDEILEQTSDVELTESQTQTWLTGWLTEGANDVQSSTNYSERNSLDDFVDIHTQTPM 310 >SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 233 Score = 30.3 bits (65), Expect = 6.0 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Query: 609 LDKETLSDE-NVGMDVESFKNCYLNEVDRHFVNNVPGEHGXXXXXXXXXXXXARIDKKKK 667 +DKE + E + MD E + E+D+ + E + DK+ K Sbjct: 149 MDKEEMDQEMDKEMDKEDKEEMDQEEMDKQDKEEMDQEMDKQDKEEMDQEEMDKQDKENK 208 Query: 668 RDHKELNKSKVYRKNERQKM 687 D +E++K K +R+KM Sbjct: 209 EDKEEMDKQDKENKEDREKM 228 >SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34) Length = 354 Score = 30.3 bits (65), Expect = 6.0 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 453 PKPLCVKRKIVDEILQGLFDTVLKESKQKEIIKKWCSPKKR-EIKEETEPQDIISEDTAV 511 PK +C ++K DE++ G+ + + S+ K+II W P + K + Q+ + + Sbjct: 130 PKEICAQKKTSDEMVTGIGSS--ETSRIKKIISSWNKPDSNGQDKGKAIDQNKFTASKSD 187 Query: 512 ARNPSTPVK 520 ++PS K Sbjct: 188 IKHPSVNQK 196 >SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2839 Score = 30.3 bits (65), Expect = 6.0 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Query: 390 LKPPRKPQYCLIKPTVLKNIEQNLLSPIKLLEKGVQEKINSEE---------IDNVIIDE 440 +K +Y +I + ++ LL P KL + ++KI+ EE +D ++ E Sbjct: 1512 IKKGESSKYEVITKMQRSDSKKKLLVPTKLEVEVSEQKIDEEENEPRACVNKLDKPVLME 1571 Query: 441 KILEEVREKFRKPKPLCVKRKIVDE 465 K +EE R + + + LC K ++ E Sbjct: 1572 KDVEEERRRLEEERRLCEKEEMERE 1596 >SB_31097| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 883 Score = 29.9 bits (64), Expect = 7.9 Identities = 21/84 (25%), Positives = 40/84 (47%) Query: 660 ARIDKKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCESKDKDLKQYVLSNVNNVV 719 A++ K K+++ KELN +K E + T ++L+ + KD K +V V V Sbjct: 8 AKVCKSKEQNSKELNSKNFKQKRELYTSLPKSVTSMRLQSRKDKDFQDKIHVDETVRPVA 67 Query: 720 VRPQKEVGPIKRKYNKQEKSSDNL 743 + + ++ K N++ + NL Sbjct: 68 QKARPIPFGLRGKVNQKLEELKNL 91 >SB_7895| Best HMM Match : uDENN (HMM E-Value=5.7e-25) Length = 945 Score = 29.9 bits (64), Expect = 7.9 Identities = 19/88 (21%), Positives = 39/88 (44%) Query: 350 PVMPSRMSLRRTKTDPKNVPSTSTAENKQGIMKVTRQDLNLKPPRKPQYCLIKPTVLKNI 409 P +P + ++ + S TA + Q + VT +DL+L+ CL+ I Sbjct: 88 PYLPVSARSKGSRASLSDTSSVKTATDGQPGITVTNEDLSLESYVPKTLCLVSAVTYFEI 147 Query: 410 EQNLLSPIKLLEKGVQEKINSEEIDNVI 437 +N L+ I L E++ + + +++ Sbjct: 148 LKNCLTTIYLAFVAGNEELLEKLVGSIL 175 >SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 942 Score = 29.9 bits (64), Expect = 7.9 Identities = 14/43 (32%), Positives = 27/43 (62%) Query: 663 DKKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCESKDK 705 +KK K+ HK+ +K K +K++++K + + K + K + S DK Sbjct: 154 EKKDKKKHKKHSKDKKKKKHKKEKKREKDKHKHKQEKESSDDK 196 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.319 0.136 0.417 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,133,599 Number of Sequences: 59808 Number of extensions: 1059525 Number of successful extensions: 3398 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 3346 Number of HSP's gapped (non-prelim): 61 length of query: 760 length of database: 16,821,457 effective HSP length: 88 effective length of query: 672 effective length of database: 11,558,353 effective search space: 7767213216 effective search space used: 7767213216 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 64 (29.9 bits)
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