Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001789-TA|BGIBMGA001789-PA|IPR011011|Zinc finger,
FYVE/PHD-type, IPR001841|Zinc finger, RING-type, IPR001965|Zinc
finger, PHD-type
(760 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 9e-22
SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) 42 0.002
SB_14893| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.21
SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) 35 0.28
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.37
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 34 0.37
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.49
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.64
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.85
SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.85
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 33 1.1
SB_59600| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1.5e-05) 31 2.6
SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 31 3.4
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 31 4.5
SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 31 4.5
SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058) 31 4.5
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 31 4.5
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 31 4.5
SB_24365| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.5
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.5
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 30 6.0
SB_22170| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34) 30 6.0
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.0
SB_31097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.9
SB_7895| Best HMM Match : uDENN (HMM E-Value=5.7e-25) 30 7.9
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 7.9
>SB_6822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 102 bits (245), Expect = 9e-22
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Query: 12 SATLVTEDIIPCAICGREVDDEVLYGKIYAIG--DIQCHYFCVLLSCCLVQKGRETDGLF 69
+++ V D C C DDE YGK + +I H +C+L + L Q G + +G
Sbjct: 121 ASSSVKGDSTSCVFCLSSADDEDKYGKFLSKEGENITVHQYCLLFASGLAQNGGDDEGFD 180
Query: 70 GFLYRDILAEIERAKKHKCSYCSRGGATLGCSVSQCRKQFHLPCGREKNAVSLFYGNYKS 129
GFL +DI E++RAK+ KCSYC GA++GC +C K+FH CGR+K A+ F+G++
Sbjct: 181 GFLCKDIDTELKRAKRLKCSYCHVSGASIGCVAVKCSKKFHFGCGRDKQALFQFFGSF-- 238
Query: 130 YCQQHVPKQK 139
H P QK
Sbjct: 239 ---NHRPTQK 245
Score = 77.0 bits (181), Expect = 5e-14
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 179 CLICYEEVEPYPGVQTFWPPCCARDAWFHRRCLQRMALTAGMHYLKCPLCNDKERFHEAV 238
C IC V+ + +T PCC R +WFHR C+QR A +G+H+ +C +CN+ + F + +
Sbjct: 258 CPICLMSVDAHDLYETLKSPCCKR-SWFHRECVQRQATASGIHFFRCAVCNNIQDFQDEM 316
Query: 239 ISQGYYIPDQDAAWELERNAYAEIYERNLRCDAEVCECPQGRDHDSNEGEWDLQTCLLCG 298
+ G +IPD+ + I+ + C A + + R +W ++ C +CG
Sbjct: 317 LRMGIHIPDR---------THRYIFRKFSDCTANLIAFNEVRVGGVG-CKWKIRLCDVCG 366
Query: 299 WSGRHARC 306
G H C
Sbjct: 367 QCGTHKIC 374
>SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45)
Length = 1133
Score = 41.9 bits (94), Expect = 0.002
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 87 KCSYCSRGGATLGCSVSQCRKQFHLPCGREKNAVSLFYGNYK 128
+C+YC+R GA++ C +C K +H PC + L N +
Sbjct: 359 RCNYCNRFGASISCDARECGKVYHYPCALVSGSFQLIVTNVR 400
>SB_14893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 735
Score = 35.1 bits (77), Expect = 0.21
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 282 HDSNEGEWDLQTCLLCGWSGR-HARCGPAPPVCASCRPAAP 321
+D NE ++ L TC++C GR H PPV A+ +P P
Sbjct: 156 NDLNESDYQLYTCVICTHYGRSHHSIRLEPPVYATTKPVVP 196
>SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027)
Length = 674
Score = 34.7 bits (76), Expect = 0.28
Identities = 22/101 (21%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 611 KETLSDENVGMDVESFKNCYLNEVDRHFVNNVPGEHGXXXXXXXXXXXXARIDKKKKRDH 670
K ++ +++V +DV KN L +R +V + ++++K+ +
Sbjct: 360 KSSVKEKDVRLDVMEQKNARL---ERDLEKSVDSKEELASELSSKKLEVSKLEKELRTAM 416
Query: 671 KELNKSKVYRKNERQKMKIRFKTRIKLK--VCESKDKDLKQ 709
++L+ SKV ++NE+ + ++ K I+ K E ++ LK+
Sbjct: 417 QDLDNSKVQKENEKSETILKLKADIQAKDEQIEELERQLKE 457
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 34.3 bits (75), Expect = 0.37
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 662 IDKKKKRDHKELNKSKVYRK-NERQKMKIRFKTRIKLKVCESKD--KDLKQYVLSNVNNV 718
+ +KK + K +++ KV +K ++RQ+ ++ K K + D K+L+QY +S+
Sbjct: 52 VAQKKDKLSKRVDQGKVIKKLSKRQRKRLEKIVEKKQKKAKRSDLFKELEQYAVSDRELA 111
Query: 719 VVRPQKEVGPIKRKYNKQEKSSDNLVQTSIQ 749
++ +G + RK E + Q +IQ
Sbjct: 112 LMSSSTSIGQLDRKRKFTESEGVPINQHAIQ 142
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 34.3 bits (75), Expect = 0.37
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 662 IDKKKKRDHKELNKSKVYRKNERQKMKIRFK-TRIKLKVCESKDKDLKQYVLSNVNNVVV 720
++ + K++ ++L K+KV + + +K+K+ TR KL+ E+K + L Q N+ + +
Sbjct: 518 LEDEIKKEKEQLKKNKVAQDEQGKKLKMEVSMTRQKLQEAEAKIRSL-QEECKNLESQLN 576
Query: 721 RPQKEVGPIKRKYNKQEKSSDNLV---QTSIQKFFAVKNCKT 759
++ I+ K K +NL+ +TS QK + N T
Sbjct: 577 MANTDLKNIREKEFKLNSEKENLLTEGKTSSQKLQSKINTLT 618
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 33.9 bits (74), Expect = 0.49
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 269 CDAEVCECPQGRDHDSNEGEWDLQTCLLCGWSGRHARCGPAPPVC--ASCRPAAPA 322
C + CPQ D E Q CLL +G+H+ P C + C P PA
Sbjct: 1363 CSNALSSCPQSCSGDHCGAECPTQCCLLAD-NGQHSSTASCPSACSPSGCNPDCPA 1417
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 33.5 bits (73), Expect = 0.64
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 665 KKKRDHKELNKSKVYRKNERQKMKIRFKTRIK-----LKVCESKDKDLKQYVLSNVNNVV 719
K K H + + KVYR +K + +K LK+ +++ ++ K + + +
Sbjct: 121 KDKLGHYDDLEDKVYRYERERKSLTKENKELKEELEDLKISKNELEEKKLGLEKKKTSEI 180
Query: 720 VRPQKEVGPIKRKYNKQEKSSDNLVQTSIQKFFAVKNCKT 759
+KE ++KYN K +NLV +KF ++ K+
Sbjct: 181 EDLEKERNEAEKKYNSLRKEKENLVSELTKKFEMLEGQKS 220
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 33.1 bits (72), Expect = 0.85
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 664 KKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCESKDKDLKQYVLSNVNNVVVRPQ 723
+KKK+ K+ K K +KN++ K K + K ++K K E + K N + +
Sbjct: 24 QKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEAENEEEKIEETE 83
Query: 724 KEVGPIKRKYNKQEK 738
KE + K ++EK
Sbjct: 84 KEKDE-EEKIEEEEK 97
>SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1203
Score = 33.1 bits (72), Expect = 0.85
Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 595 TPVKVK-KCAFKFSPLDKETLSDENVGMDVESFKNCYLNEVDRHFVNNVPGEHGXXXXXX 653
TP + K K + K + + T+ + G++ ++ NCYL+ +R+ + G+
Sbjct: 222 TPYRKKMKLSLKVNKEQQNTMEGQKAGLNTQTESNCYLSTTERYDIRGAYGDSTQQSSTD 281
Query: 654 XXXXXXARIDKKKKRDHKELNKSKVYRKNE 683
KK+ D + + K + +K E
Sbjct: 282 IWFVCLKGDGKKRMEDFERVIKPEDIQKFE 311
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 32.7 bits (71), Expect = 1.1
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 661 RIDKKKKRDHKELNKSKVYRKNERQKMKIRFK-TRIKLKVCESKDKDLKQYVLSNVNNVV 719
+++K+KK K+L K R+ E+QK ++R K + K K E K+ K+ +L
Sbjct: 930 QLEKEKKEKEKKLLIEKEKREKEKQKERLREKEEKEKQKEAERAKKE-KERLLQEDKLHE 988
Query: 720 VRPQKEVGPIKRKYNKQEKSSDNLVQ 745
+ KRK K+++ D V+
Sbjct: 989 KEEKDRKDKEKRKVEKEKREKDKQVE 1014
Score = 31.9 bits (69), Expect = 2.0
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 375 ENKQGIMKVTRQDLNLKPPRKPQYCLI-KPTVLKNIEQNLLSPIKLLEKGVQEKINSEEI 433
E ++ K +Q L + K + LI K K ++ L + EK + + +E
Sbjct: 918 EREEKERKRRQQQLEKEKKEKEKKLLIEKEKREKEKQKERLREKEEKEKQKEAERAKKEK 977
Query: 434 DNVIIDEKILEEVREKFRKPKPLCVKRKIVDEILQGLFDTVLKESKQ--KEIIKKWCSPK 491
+ ++ ++K L E EK RK K KRK+ E + V KE K K + K+ S K
Sbjct: 978 ERLLQEDK-LHEKEEKDRKDKE---KRKVEKEKREK-DKQVEKEKKDSLKRVKKRKDSDK 1032
Query: 492 KREIKEETEPQDI 504
+R++KE+ E Q +
Sbjct: 1033 ERKVKEKEEEQKV 1045
>SB_59600| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1.5e-05)
Length = 1119
Score = 31.5 bits (68), Expect = 2.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 461 KIVDEILQGLFDTVLKESKQKEIIKKWC---SPKKREIKEETEPQDIISEDTAVARNP 515
K ++ + +G DT LK ++ WC S K+R + E + Q I + VA+NP
Sbjct: 822 KKLERLFKGYIDTFLKYKQEASGWPAWCDTDSDKQRYLDEYEQHQGIRLDKEKVAKNP 879
>SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 31.1 bits (67), Expect = 3.4
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Query: 179 CLICYEEVEPYPGVQTFWPPCCARDA--WFHRRCLQRM--ALTAG--MHYLKCPLCN 229
C +C+ E P V + PC R W H+ CLQR AG + CP CN
Sbjct: 25 CWVCFATDEDEPSV-AWVKPCLCRGTTKWVHQSCLQRWIDEKQAGNSAATVSCPQCN 80
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 31.1 bits (67), Expect = 3.4
Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 363 TDPKNVPSTSTAENKQGIMKVTRQDLNLKPPRKPQYCLIKPTVLKNIEQN---LLSPIKL 419
T +N ++ T + ++ I TRQ+ + PP+ I ++N + + L++P ++
Sbjct: 474 TSVQNGSTSPTPDTEEIITADTRQETEMAPPQNKISEPIPEDAVENNKTSTAPLVTPTEV 533
Query: 420 LEKGVQEKINSEEIDNVIIDEKILEEVREKFRKPKPLCVKRKIVDEILQGLFDTVLKESK 479
E Q + E N +I+E + E + P +K + Q + D K+ K
Sbjct: 534 DEMVKQSAVVKETKPNNVIEETVESETTVNGLESDPERLKSSQGTTVDQSVKDVPKKKKK 593
Query: 480 QKEIIKKWCSPKKREIKEETEPQDIISEDTAVARNPST 517
K+ ++ +KR K + + V++ P T
Sbjct: 594 GKQ---RFQEMEKRSDKADLMDAYTERPEKEVSKEPQT 628
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 30.7 bits (66), Expect = 4.5
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 660 ARIDKKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCESKDKDLKQYVLSNVNNVV 719
+R DK+ K + KE+ KSK + + +K K++ + +V + K K K +
Sbjct: 7 SRKDKEVKDEEKEIRKSKEKVEKKTKKRKLKESAEEQPEVSKKKRKTAKDESEFDEGVEP 66
Query: 720 VRPQKEVGPIKRKYNKQEKSSDNLVQTSIQKFFAVK 755
Q+E G K+ +K+ DNL I F ++
Sbjct: 67 SVAQRE-GDFS-KFRISQKTIDNLEDRGITYLFPIQ 100
>SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45)
Length = 1091
Score = 30.7 bits (66), Expect = 4.5
Identities = 20/65 (30%), Positives = 25/65 (38%)
Query: 551 PQKLKKLDIQXXXXXXXXXXXXXXXXDVKKMDTQCDRSEGVDLKTPVKVKKCAFKFSPLD 610
P+KL+ L KKM TQ + EG + P K + A K S
Sbjct: 808 PEKLEHLQDALESMQYAGEHLEMAEGKRKKMSTQASKREGAQTREPKKWENIAQKLSKRL 867
Query: 611 KETLS 615
KE LS
Sbjct: 868 KEALS 872
>SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058)
Length = 1002
Score = 30.7 bits (66), Expect = 4.5
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 350 PVMPSRMSLRRTKTDPKNV-PSTSTAENKQGIMKVTRQDLNLKPPRKPQYCLIKPTVLKN 408
P++ S +++R P NV P + N I + LN++P L+KP +
Sbjct: 574 PIVVSPLNVRPIMVSPPNVRPIVVSPPN---IRPIVVSPLNVRPIMVDP--LVKPPKNLH 628
Query: 409 IEQNLLSPIKLLEKGVQEKINSEEIDNVIIDEKILEE 445
+ L+S ++ EK +Q SEE I+ ++I EE
Sbjct: 629 VYDMLVSLVEAEEKCIQRVRLSEEEVKEILQQRIKEE 665
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 30.7 bits (66), Expect = 4.5
Identities = 20/80 (25%), Positives = 37/80 (46%)
Query: 373 TAENKQGIMKVTRQDLNLKPPRKPQYCLIKPTVLKNIEQNLLSPIKLLEKGVQEKINSEE 432
+ + K G++ Q ++ K Q+ ++NI+QN+ + L+KG+QE E
Sbjct: 36 SVDEKVGVVGQHVQSVDEKVGVVGQHVQSLDEKVQNIDQNVAKGFQNLQKGIQEIKKGAE 95
Query: 433 IDNVIIDEKILEEVREKFRK 452
DN + L + E +K
Sbjct: 96 RDNAAAKHEELVKQEEAIKK 115
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 30.7 bits (66), Expect = 4.5
Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 586 DRSEGVDLKTPVKVKKCAFKFSPLDKETLS-DENVGMDVESFKNCYLNEVDRH---FVNN 641
+R + KTP + K A++ L +++ + +E + ++++ KN D H N
Sbjct: 1330 ERDKQAAEKTPDEAAKKAYEIETLHQQSKAREERLKQELQASKNKIAKIEDDHKKIHQQN 1389
Query: 642 VPGEHGXXXXXXXXXXXXARIDKKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCE 701
+ +H A + +K + + KE+ +S + +++R++ +K KV
Sbjct: 1390 IERDHENKMLSKRVADLTA-LKEKFEHEKKEMKQSLREAQGRESDLEVRYEYEVKEKVAL 1448
Query: 702 SKDKD 706
+ D
Sbjct: 1449 QQQLD 1453
>SB_24365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 663 DKKKKRDHKELNKSKVYRKNE-RQKMKIRFKTRIKLKVCESKDKDLKQY 710
DK +K D EL + + + KN+ ++K K + K +IK K + + +QY
Sbjct: 437 DKDEKEDEDELEEKEDWSKNKTKKKTKEKTKEKIKSKTLQRRGLFKRQY 485
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 30.7 bits (66), Expect = 4.5
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 663 DKKKKRDHKELNKSKVYRKNERQKMKIRF-KTRIKLKVCESKDKDLKQYVLSNVNNVVVR 721
+K +RD EL K + E ++ + K + +L ++ DLK L++ NN +++
Sbjct: 135 NKTLERDVDELLDDKKDLQEELADLRPKVEKLQTQLDATTTQRDDLKN-ALADANNTILK 193
Query: 722 PQKEVGPIKRKYNKQEKSSDNL 743
++E+ + + ++QEK++ +L
Sbjct: 194 LKEELNNAEMRASQQEKANSSL 215
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 30.3 bits (65), Expect = 6.0
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 368 VPSTSTAENKQGIMKVTRQDLN---LKPPR-KPQYCLIKPTVLKNIEQNLLSPIKLLEKG 423
V + E K ++TR++ +KP + KP KP K + + P+ EK
Sbjct: 5386 VSAEKVVEEKPLEKQITRKEKTAEEVKPKKGKPMDREAKPLEEKPLVEEKELPVSA-EKA 5444
Query: 424 VQEKINSEEIDNVIIDEKILEEVREKFRKP----------KPLCVKRKIVDEILQGLFDT 473
V+EK + I EK +EEVR K KP KPL ++++ + + + +
Sbjct: 5445 VEEKPLEKPITR---KEKKVEEVRPKTEKPTEREAKSLKEKPLVEEKELTVSVEKAVEEK 5501
Query: 474 VL------KESKQKEIIKKWCSPKKREIKEETEPQDIISE 507
L KE K +E+ K P +RE K E + ++ E
Sbjct: 5502 PLEKPITRKEKKVEEVKPKKEKPTEREAK-PLEEKPLVEE 5540
>SB_22170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 460 RKIVDEILQGLFDTVLKESKQKEIIKKWCSPKKREIKEETEPQDIISEDTAVARNPSTPV 519
++I+DEIL+ D L ES+ + + W + +++ T + S D V + TP+
Sbjct: 251 QRIIDEILEQTSDVELTESQTQTWLTGWLTEGANDVQSSTNYSERNSLDDFVDIHTQTPM 310
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 30.3 bits (65), Expect = 6.0
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 609 LDKETLSDE-NVGMDVESFKNCYLNEVDRHFVNNVPGEHGXXXXXXXXXXXXARIDKKKK 667
+DKE + E + MD E + E+D+ + E + DK+ K
Sbjct: 149 MDKEEMDQEMDKEMDKEDKEEMDQEEMDKQDKEEMDQEMDKQDKEEMDQEEMDKQDKENK 208
Query: 668 RDHKELNKSKVYRKNERQKM 687
D +E++K K +R+KM
Sbjct: 209 EDKEEMDKQDKENKEDREKM 228
>SB_48765| Best HMM Match : A1pp (HMM E-Value=3.5e-34)
Length = 354
Score = 30.3 bits (65), Expect = 6.0
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 453 PKPLCVKRKIVDEILQGLFDTVLKESKQKEIIKKWCSPKKR-EIKEETEPQDIISEDTAV 511
PK +C ++K DE++ G+ + + S+ K+II W P + K + Q+ + +
Sbjct: 130 PKEICAQKKTSDEMVTGIGSS--ETSRIKKIISSWNKPDSNGQDKGKAIDQNKFTASKSD 187
Query: 512 ARNPSTPVK 520
++PS K
Sbjct: 188 IKHPSVNQK 196
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 30.3 bits (65), Expect = 6.0
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 390 LKPPRKPQYCLIKPTVLKNIEQNLLSPIKLLEKGVQEKINSEE---------IDNVIIDE 440
+K +Y +I + ++ LL P KL + ++KI+ EE +D ++ E
Sbjct: 1512 IKKGESSKYEVITKMQRSDSKKKLLVPTKLEVEVSEQKIDEEENEPRACVNKLDKPVLME 1571
Query: 441 KILEEVREKFRKPKPLCVKRKIVDE 465
K +EE R + + + LC K ++ E
Sbjct: 1572 KDVEEERRRLEEERRLCEKEEMERE 1596
>SB_31097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 883
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 660 ARIDKKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCESKDKDLKQYVLSNVNNVV 719
A++ K K+++ KELN +K E + T ++L+ + KD K +V V V
Sbjct: 8 AKVCKSKEQNSKELNSKNFKQKRELYTSLPKSVTSMRLQSRKDKDFQDKIHVDETVRPVA 67
Query: 720 VRPQKEVGPIKRKYNKQEKSSDNL 743
+ + ++ K N++ + NL
Sbjct: 68 QKARPIPFGLRGKVNQKLEELKNL 91
>SB_7895| Best HMM Match : uDENN (HMM E-Value=5.7e-25)
Length = 945
Score = 29.9 bits (64), Expect = 7.9
Identities = 19/88 (21%), Positives = 39/88 (44%)
Query: 350 PVMPSRMSLRRTKTDPKNVPSTSTAENKQGIMKVTRQDLNLKPPRKPQYCLIKPTVLKNI 409
P +P + ++ + S TA + Q + VT +DL+L+ CL+ I
Sbjct: 88 PYLPVSARSKGSRASLSDTSSVKTATDGQPGITVTNEDLSLESYVPKTLCLVSAVTYFEI 147
Query: 410 EQNLLSPIKLLEKGVQEKINSEEIDNVI 437
+N L+ I L E++ + + +++
Sbjct: 148 LKNCLTTIYLAFVAGNEELLEKLVGSIL 175
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 29.9 bits (64), Expect = 7.9
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 663 DKKKKRDHKELNKSKVYRKNERQKMKIRFKTRIKLKVCESKDK 705
+KK K+ HK+ +K K +K++++K + + K + K + S DK
Sbjct: 154 EKKDKKKHKKHSKDKKKKKHKKEKKREKDKHKHKQEKESSDDK 196
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,133,599
Number of Sequences: 59808
Number of extensions: 1059525
Number of successful extensions: 3398
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3346
Number of HSP's gapped (non-prelim): 61
length of query: 760
length of database: 16,821,457
effective HSP length: 88
effective length of query: 672
effective length of database: 11,558,353
effective search space: 7767213216
effective search space used: 7767213216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -