GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001789-TA|BGIBMGA001789-PA|IPR011011|Zinc finger,
FYVE/PHD-type, IPR001841|Zinc finger, RING-type, IPR001965|Zinc
finger, PHD-type
         (760 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    28   0.80 
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   5.6  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    25   7.4  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    25   7.4  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    25   7.4  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   9.8  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   9.8  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 28.3 bits (60), Expect = 0.80
 Identities = 9/14 (64%), Positives = 11/14 (78%)

Query: 222 YLKCPLCNDKERFH 235
           YLKCPLCN++   H
Sbjct: 341 YLKCPLCNEQHPLH 354


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 292 QTCLLCGWSGRHARCGPAPPVCASC 316
           Q C+ CG  G +A+   +   CA+C
Sbjct: 411 QACIRCGADGHYAKSCTSEIKCAAC 435


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 668 RDHKELNKS-KVYRKNERQKMK-IRFKTRIKLKVCESKDKDLKQYVLSNV 715
           R   EL+ S   YR N  Q  + I   ++ +L + E KD D+K + LS +
Sbjct: 237 RSLMELSASLDTYRPNSSQLFRAISAGSKSELIINEEKDPDVKDFDLSGI 286


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 668 RDHKELNKS-KVYRKNERQKMK-IRFKTRIKLKVCESKDKDLKQYVLSNV 715
           R   EL+ S   YR N  Q  + I   ++ +L + E KD D+K + LS +
Sbjct: 90  RSLMELSASLDTYRPNSSQLFRAISAGSKSELIINEEKDPDVKDFDLSGI 139


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 668 RDHKELNKS-KVYRKNERQKMK-IRFKTRIKLKVCESKDKDLKQYVLSNV 715
           R   EL+ S   YR N  Q  + I   ++ +L + E KD D+K + LS +
Sbjct: 237 RSLMELSASLDTYRPNSSQLFRAISAGSKSELIINEEKDPDVKDFDLSGI 286


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 674 NKSKVYRKNERQKMKIRFKTRIKLKVCESKDKDLKQYVLSNVNNV--VVRPQKEVGPIKR 731
           NK K+YR NE+    +    RIK    +   +  K    S ++ +  + +P  EV  + +
Sbjct: 432 NKLKIYRSNEQILKSMILDPRIKQLGFQDDVEKFKNICESIISELLPLQKPAVEVEKVVK 491

Query: 732 KYNK 735
           K +K
Sbjct: 492 KVSK 495


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)

Query: 294 CLLCGWSGRHARCGPAPPVCASC 316
           C+ CG SG  A    A   CASC
Sbjct: 429 CIRCGTSGHLAATCEAEVRCASC 451


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,629
Number of Sequences: 2123
Number of extensions: 29898
Number of successful extensions: 48
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 45
Number of HSP's gapped (non-prelim): 7
length of query: 760
length of database: 516,269
effective HSP length: 69
effective length of query: 691
effective length of database: 369,782
effective search space: 255519362
effective search space used: 255519362
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)