Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001788-TA|BGIBMGA001788-PA|undefined
(278 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5GBS8 Cluster: Polymorphic outer membrane protein prec... 38 0.28
UniRef50_Q59V89 Cluster: Possible SET-like protein; n=1; Candida... 34 3.5
UniRef50_A4E8A2 Cluster: Putative uncharacterized protein; n=1; ... 34 4.6
UniRef50_UPI000150A032 Cluster: hypothetical protein TTHERM_0034... 33 6.0
UniRef50_Q8KUT2 Cluster: PANL59; n=2; Synechococcus elongatus PC... 33 8.0
UniRef50_Q1IT47 Cluster: Acetyl-CoA hydrolase/transferase; n=3; ... 33 8.0
UniRef50_Q1IRD3 Cluster: Polysaccharide deacetylase precursor; n... 33 8.0
UniRef50_A6E3C9 Cluster: Transcriptional regulator, AraC family ... 33 8.0
UniRef50_A1G9R2 Cluster: Beta-ketoacyl synthase; n=3; cellular o... 33 8.0
UniRef50_Q3IUT8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_A5GBS8 Cluster: Polymorphic outer membrane protein
precursor; n=1; Geobacter uraniumreducens Rf4|Rep:
Polymorphic outer membrane protein precursor - Geobacter
uraniumreducens Rf4
Length = 2042
Score = 37.9 bits (84), Expect = 0.28
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 141 GSTLYVATPPGESVALFSTLSMSAQIKACVDALGYRKYEDAKLHGKDIPSLLRINDRAWS 200
G T ++ G +V F+ +S I + K+ +HG I +L+++ D +WS
Sbjct: 78 GRTPSISVLNGRTVVKFNLSGISGAINSASF-----KFNVIDIHGTPILNLIKVTDNSWS 132
Query: 201 GMAQNLASVPDYAPKPILTYNGIDYTNRT 229
++ P Y +T N Y+N++
Sbjct: 133 EQPVGASTFPTYTDTDYITQNSTPYSNQS 161
>UniRef50_Q59V89 Cluster: Possible SET-like protein; n=1; Candida
albicans|Rep: Possible SET-like protein - Candida
albicans (Yeast)
Length = 630
Score = 34.3 bits (75), Expect = 3.5
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 107 LKKGKHRFTRPEVQTNLIGDLLYISVQLVSDTKEGSTLYVATPPGESVALFSTLSMSAQI 166
L G H+F PE++TNL+ +L+ + +Q + +Y + P + +I
Sbjct: 417 LVDGIHQFEIPEIRTNLVKELMDVVIQ-----DKAFPMY-SFPFSIIIRELDLADSGRRI 470
Query: 167 KACVDALGYRKYEDAKLHGKDIPS 190
K+ DA+ + + +L G DIPS
Sbjct: 471 KSSKDAIDRLRIKQQRLFGVDIPS 494
>UniRef50_A4E8A2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 325
Score = 33.9 bits (74), Expect = 4.6
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Query: 42 VARVLTRHIAKSLEAHELNDILARLKLKLVASQNRMWH-VVNMSEQHTAGPITELIETLP 100
+A + + A + EA EL L + + ++ +S N +W V N + + +A + E
Sbjct: 41 IAELTAQKPANADEAAELYAKLMQKENEIFSSDNALWEKVFNAANKDSA--MIEDGSNYG 98
Query: 101 EVIENNLKKGKHRFTRPEVQTNLIG--DLLYISVQLVSDTKEGSTLYVATPPGESVALFS 158
+ + + K FT E++T G + I +L S KE GESV S
Sbjct: 99 DFLLKTIDGAKDEFTADELKTLKAGAQQIKEIEDKLESLEKEFPGCGSTPSAGESVDA-S 157
Query: 159 TLSMSAQIKACVDALGYRKYEDAKLHGKDIPS 190
T M+A A +A + + L G D+ S
Sbjct: 158 TAGMTAGANASSEATKFPSFTGKDLDGNDVNS 189
>UniRef50_UPI000150A032 Cluster: hypothetical protein
TTHERM_00343370; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00343370 - Tetrahymena
thermophila SB210
Length = 1138
Score = 33.5 bits (73), Expect = 6.0
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 101 EVIENNLKKGKHRFTRPEVQTNLIGDLLYISVQLVSDTKEGSTLYV 146
EVI N LK+ + RF+ QTN G + SVQL D E S LY+
Sbjct: 174 EVINNKLKESEPRFSPFSSQTNAFGTISNHSVQLNKD--EVSRLYI 217
>UniRef50_Q8KUT2 Cluster: PANL59; n=2; Synechococcus elongatus PCC
7942|Rep: PANL59 - Synechococcus sp. (strain PCC 7942)
(Anacystis nidulans R2)
Length = 190
Score = 33.1 bits (72), Expect = 8.0
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 36 PMTAASVARVLTRHIAKSLEAHELNDILARLKLKLV--ASQNRMWHVVNMSEQHTAGPIT 93
P SVA L + +AK EA + +++ARLK L + R W + T
Sbjct: 23 PEIRGSVAHALYKRLAKDTEAAQSAELIARLKPLLADPDMEVRCWVAHTLKRIGTEAATD 82
Query: 94 ELIETLPEVIENNLKKGKHRFTRP 117
L E L E+ L+K F+RP
Sbjct: 83 ALYEMLHELSAEELEKS--YFSRP 104
>UniRef50_Q1IT47 Cluster: Acetyl-CoA hydrolase/transferase; n=3;
Bacteria|Rep: Acetyl-CoA hydrolase/transferase -
Acidobacteria bacterium (strain Ellin345)
Length = 443
Score = 33.1 bits (72), Expect = 8.0
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 68 LKLVASQNRMW-HVVNMSEQHTAGPITELIETLPEV-IENNLKKGKHRFTRPEVQTNLIG 125
LK V S R+W H + Q A +T L +V + + L GK R+ PE +
Sbjct: 19 LKAVQSGMRVWVHANSGFPQVLADALTARAPELRDVEVAHLLGMGKARYAEPEYAASFRP 78
Query: 126 DLLYISVQLVSDTKEGSTLYVATPPGESVALFSTLSMSAQI 166
+ L+I + + +G Y E ALF++ +M I
Sbjct: 79 NALFIGPSVRTAVNDGRADYTPIHLSEIEALFTSGAMPIDI 119
>UniRef50_Q1IRD3 Cluster: Polysaccharide deacetylase precursor; n=1;
Acidobacteria bacterium Ellin345|Rep: Polysaccharide
deacetylase precursor - Acidobacteria bacterium (strain
Ellin345)
Length = 322
Score = 33.1 bits (72), Expect = 8.0
Identities = 16/71 (22%), Positives = 33/71 (46%)
Query: 54 LEAHELNDILARLKLKLVASQNRMWHVVNMSEQHTAGPITELIETLPEVIENNLKKGKHR 113
L ++N++ ++L L Q VN + + G + + I L + ++N + G H
Sbjct: 45 LSGKQMNELTSKLLATLKQEQVPAIGFVNEQKLYVKGEVDDRIGALRQWVDNGFELGNHT 104
Query: 114 FTRPEVQTNLI 124
F+ + TN +
Sbjct: 105 FSHMSLDTNTL 115
>UniRef50_A6E3C9 Cluster: Transcriptional regulator, AraC family
protein; n=1; Roseovarius sp. TM1035|Rep:
Transcriptional regulator, AraC family protein -
Roseovarius sp. TM1035
Length = 306
Score = 33.1 bits (72), Expect = 8.0
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 22 KWREVFRAVRLARLPMTAASVARVLTRHIAKSLEAHELNDILARLKLKLVASQNRMWHVV 81
KW + + + +TAAS +R + H + + D+++RL+ +LVA R W V
Sbjct: 168 KWHDPRTLQGVGSVVLTAASASRTVEVH-----DNNPETDLVSRLRGRLVADPVRRWTVA 222
Query: 82 NMSEQHTAGPIT 93
+++ + A P T
Sbjct: 223 SLAAEAGAAPRT 234
>UniRef50_A1G9R2 Cluster: Beta-ketoacyl synthase; n=3; cellular
organisms|Rep: Beta-ketoacyl synthase - Salinispora
arenicola CNS205
Length = 1835
Score = 33.1 bits (72), Expect = 8.0
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 25 EVFRAVRLARLPMTAASVARVLTRHIAKSLEAHELNDILARLKLKLVASQNRMWHVVNMS 84
E+ AV L + A AR R A +L+ E +A L ++ R+ + +
Sbjct: 692 EIAAAVAAGSLDLEPA--ARFACRRAA-ALQRLEGRGAMAMASLSFEQARERLAGIAGVE 748
Query: 85 EQHTAGPITELIETLPEVIENNLKKGKHR--FTRPEVQTNLIGDLLYISVQLVSDTKEGS 142
+A P + ++ PE + +K+ + RP V T + + ++++D + G+
Sbjct: 749 AAISASPYSTVVSGDPEAVAGLVKRWRTEGIVMRP-VDTTIAFHSCQVD-EVLTDIRMGA 806
Query: 143 TLYVATPPGESVALFSTLSMSAQIKACVDA 172
+ V PP +V L+ST A+ A DA
Sbjct: 807 SALVPRPP--TVPLYSTALADARADAARDA 834
>UniRef50_Q3IUT8 Cluster: Putative uncharacterized protein; n=1;
Natronomonas pharaonis DSM 2160|Rep: Putative
uncharacterized protein - Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678)
Length = 366
Score = 33.1 bits (72), Expect = 8.0
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 127 LLYISVQLVSDTKEGSTLYVATPPGESVALFSTLSMSAQIKACVDALGYRKYEDAKL 183
LLY+ + D + G L A P E V L+ LS A VDALG R D ++
Sbjct: 67 LLYVDEECRLDER-GRRLLDAAPDTEPVVLYRALSSVRGFDAAVDALGVRPLTDIEI 122
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.320 0.134 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,512,690
Number of Sequences: 1657284
Number of extensions: 10330229
Number of successful extensions: 25140
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 25136
Number of HSP's gapped (non-prelim): 11
length of query: 278
length of database: 575,637,011
effective HSP length: 100
effective length of query: 178
effective length of database: 409,908,611
effective search space: 72963732758
effective search space used: 72963732758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 72 (33.1 bits)
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