GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001788-TA|BGIBMGA001788-PA|undefined
         (278 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    28   0.080
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.7  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 28.3 bits (60), Expect = 0.080
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 125 GDLLYISVQLVSDTKEGSTL-YVATPPGESVALFSTLSMSAQIKACVDALGYRKYEDAKL 183
           G L+ +SVQL+S    GSTL Y+    G ++ +++    S Q           +Y    +
Sbjct: 181 GALVTLSVQLLSCEVNGSTLVYIGDNEGFALIIYNNSDNSFQRLTSSTFASDPRYTTFTI 240

Query: 184 HGKDIPSLLRINDRAWSGMAQNL 206
           +G+       I   A S + QNL
Sbjct: 241 NGESFTLQSGIFGMALSPLTQNL 263


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 101 EVIENNLKKGKHRFTRPE 118
           +VIE+  +K KHR  RPE
Sbjct: 621 QVIEDAAQKKKHRAIRPE 638


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,486
Number of Sequences: 429
Number of extensions: 2856
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 2
length of query: 278
length of database: 140,377
effective HSP length: 57
effective length of query: 221
effective length of database: 115,924
effective search space: 25619204
effective search space used: 25619204
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)