Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001787-TA|BGIBMGA001787-PA|IPR007087|Zinc finger,
C2H2-type
(518 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 34 0.042
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 1.2
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 29 1.6
SPAC630.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 2.1
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 28 2.7
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 28 2.7
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 28 3.6
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 28 3.6
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 27 4.8
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 6.3
SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|ch... 27 6.3
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 27 8.3
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 27 8.3
SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|ch... 27 8.3
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 27 8.3
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 27 8.3
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 27 8.3
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 34.3 bits (75), Expect = 0.042
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 94 NTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYH 132
N KT +P G +S F CP CSK FK +HI+ H
Sbjct: 409 NRKTSVPRSPGGKS-FVCPECSKKFKRSEHLRRHIRSLH 446
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.5 bits (63), Expect = 1.2
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 344 KENVLKLLYGKALEMASLLNDEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVP 403
+E + KLL +++L E + EC+ +E +K + I E++SKL E+K V
Sbjct: 252 QERLEKLLVSSNKTVSTLRQTENSLRAECKTLQEKLEKCA---INEEDSKLLEELKHNVA 308
Query: 404 VKTYSNTRKNVKFEDNKIGSPKFGSPAS----LTSFNDSYRHFVEDTLGAVDE 452
+ + K+ ED +F + S L+ N+ + +T+G++ +
Sbjct: 309 NYSDAIVHKDKLIEDLSTRISEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKD 361
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 29.1 bits (62), Expect = 1.6
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 42 KKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPS 101
KKR+ R K ++++ + H ++ V K E+ K+ + + N +
Sbjct: 317 KKRVWSREK-RLLSEMAITNHSPLLNV-DDYRKFREDLWKKRHGKRKVYQCSNCSQTFIN 374
Query: 102 EDGKQSEFECPVCSKIFKVYSWAW 125
ED + S CP C + K++S W
Sbjct: 375 EDIQNSSAFCPKCIRHSKLFSLPW 398
>SPAC630.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 430
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 355 ALEMASLLNDEAGCKIECQNGKELAKKTSTDDIVE---DESKLDTEMKTKVPVKTYSNTR 411
A+E S +++E+ KIE K S DD+V+ + SKL + K +K S
Sbjct: 15 AIEYESGVDEESSLKIEKFRVLIFGKDNSQDDLVKSVFNLSKLSEKEKMPFGIKCESEEN 74
Query: 412 KNVKFEDNKIG 422
N + +K+G
Sbjct: 75 PNFESYHSKVG 85
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 28.3 bits (60), Expect = 2.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 150 KPVRIERCIACNVLIKSDDHTC 171
KP R + C CN+ ++ DH C
Sbjct: 167 KPARSKHCRLCNICVEKFDHHC 188
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 28.3 bits (60), Expect = 2.7
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 48 RPKTEVIAKR--KLIP-HKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDG 104
RP +E+I R P H+ + N N S + SQ HNL P S
Sbjct: 208 RPPSELINSRISDFFPDHQPKLLEKTISNSLRRNLSIRTSQGHNLGNFGQEILPRSSRRA 267
Query: 105 KQSEFECPVCS 115
+ SE CP+ S
Sbjct: 268 RPSELVCPLSS 278
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 71 KMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDG 104
++NK EN T+ NLL+K+ T +P PS +G
Sbjct: 169 EINKIPENIVTQSLSYTNLLKKFET-SPNPSNNG 201
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 344 KENVLKLLYGKALEMASLLNDEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVP 403
K+N L+ L A + + ++D G + E ST +E ESK++ E+
Sbjct: 353 KDNELEHLVSPATSVHTTVSDITGHQSVTDESDEQNNCMSTPPKIEIESKIEEEISVVSK 412
Query: 404 VKTYSNTRKNVKFEDN 419
K S++ +V E N
Sbjct: 413 SKEISSSVSSVGKEQN 428
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 72 MNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSW 123
M+ T NA + +S H +L+ Y T+TP E KQ E E K+ V+S+
Sbjct: 244 MSPTEANAVSSRS--HAVLQIYITQTPKSGE--KQEESESQNSHKVRSVFSF 291
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 6.3
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 70 HKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSK-IFKVYSWAWKHI 128
+K ++ S N+ KK P +TKT + + + ECP+C++ + + ++ H
Sbjct: 51 YKKSRISSNSENKKQIP-------DTKTLLETFQKIKKTLECPICTEALQRPFTTHCGHT 103
Query: 129 QKYHCI 134
Y C+
Sbjct: 104 YCYECL 109
>SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 240 SKIDNMQIYHCSHMKCDSSTASMCPSSFT 268
++I + ++CS CD +T CP+S+T
Sbjct: 324 NRIAEIGRFNCSSSGCDYATNVTCPNSYT 352
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 26.6 bits (56), Expect = 8.3
Identities = 19/65 (29%), Positives = 28/65 (43%)
Query: 361 LLNDEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVKFEDNK 420
+LN GC EL KK+S ++ +SK K +T + + N E+NK
Sbjct: 626 ILNVNLGCVNNLTELTELTKKSSLKYVLYVDSKEVASKTIKFVDRTPISLQTNAYIENNK 685
Query: 421 IGSPK 425
S K
Sbjct: 686 KSSIK 690
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 240 SKIDNMQIYHCSHMKCDSSTASMCPSSFT 268
++I + ++CS CD +T CP S+T
Sbjct: 404 NRIAEIGRFNCSSSGCDYATNVTCPDSYT 432
>SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 240 SKIDNMQIYHCSHMKCDSSTASMCPSSFT 268
++I + ++CS CD +T CP S+T
Sbjct: 324 NRIAEIGRFNCSSSGCDYATNVTCPDSYT 352
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 73 NKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQS 107
NKTS++A K+S+ LL +T P P + S
Sbjct: 458 NKTSKSAKPKRSERTGLLSHQSTLAPEPLSQQRDS 492
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 370 IECQNGKELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVKFEDNKIGSPKFG 427
+E +E +KK+ DI E + K+D ++ K V + KN KF ++ FG
Sbjct: 487 VEDTGNREKSKKSLRKDIREKKRKIDEYVEEKYGVPE-AVIVKNSKFRYQQVAPETFG 543
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 26.6 bits (56), Expect = 8.3
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 344 KENVLKLLYGKALEMASLLNDEAGCKIECQNGKELAKKTSTDDIVEDE---SKLDTEMKT 400
K +LK+ E+ ++EA K + + K KK D D+ SK D +
Sbjct: 44 KAFLLKMAKRSVEELKRSADEEASVKRKEKKSKHEHKKHKKDKPSADKDRISKKDKKKSK 103
Query: 401 KVPVKTYSNTRKNVKFEDNKIGSPKFGSPASLTSFND 437
K KT + + E KI P GS A+ ++ ND
Sbjct: 104 KGKSKTKEESIEINAEEGAKIAQPAIGS-ANASNHND 139
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,348,203
Number of Sequences: 5004
Number of extensions: 101493
Number of successful extensions: 303
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 293
Number of HSP's gapped (non-prelim): 19
length of query: 518
length of database: 2,362,478
effective HSP length: 76
effective length of query: 442
effective length of database: 1,982,174
effective search space: 876120908
effective search space used: 876120908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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