Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001787-TA|BGIBMGA001787-PA|IPR007087|Zinc finger,
C2H2-type
(518 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 38 0.015
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.026
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.026
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.026
SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0) 35 0.14
SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.24
SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.32
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 34 0.32
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 33 0.42
SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 33 0.42
SB_37120| Best HMM Match : EB (HMM E-Value=4.2) 33 0.42
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_15832| Best HMM Match : zf-C2H2 (HMM E-Value=7e-35) 33 0.56
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 33 0.74
SB_21191| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.74
SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.74
SB_31772| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.97
SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32) 31 1.7
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 1.7
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_45123| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 2.2
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 2.2
SB_8254| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 2.2
SB_50411| Best HMM Match : zf-C2H2 (HMM E-Value=1.3e-08) 31 3.0
SB_5863| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.0
SB_5953| Best HMM Match : FeS (HMM E-Value=5.5) 31 3.0
SB_19685| Best HMM Match : Retrotrans_gag (HMM E-Value=0.061) 30 3.9
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 30 5.2
SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33) 30 5.2
SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.2
SB_14155| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.2
SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 29 6.9
SB_45976| Best HMM Match : MBT (HMM E-Value=0) 29 6.9
SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 6.9
SB_31268| Best HMM Match : zf-C2H2 (HMM E-Value=5.04467e-44) 29 6.9
SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_6911| Best HMM Match : Ank (HMM E-Value=0) 29 6.9
SB_30070| Best HMM Match : zf-C2H2 (HMM E-Value=4.79945e-42) 29 6.9
SB_2845| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.1
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 29 9.1
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 29 9.1
SB_27651| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 9.1
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 38.3 bits (85), Expect = 0.015
Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 8/126 (6%)
Query: 14 LTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIP-HKKVIKVAHKM 72
LT KC C F N Q+L HQ + K +V K + H K KV H
Sbjct: 1057 LTFKCSHCNETFSNRQSLIKHQR-----EVTAEGDFKCDVCEKCFITKAHLKTHKVVHTR 1111
Query: 73 NKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYH 132
+ NL + + P S K+ E+ C VC K+F S H+ ++H
Sbjct: 1112 QPRCPSCKETFDSKENLKQHSSAGCPEKSSQ-KKEEYTCEVCDKVFSRVSSYKTHV-RFH 1169
Query: 133 CIDEKG 138
D G
Sbjct: 1170 SKDTTG 1175
Score = 32.7 bits (71), Expect = 0.74
Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 18/186 (9%)
Query: 18 CDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSE 77
CD C +K + LR+H + + K+R +V + + + +VI + + E
Sbjct: 329 CDECGKVYKTAKLLRTHAKIHN--KQRFPCPQCDKVFSSKGFLAKHEVIHSDQRPHVCME 386
Query: 78 -NASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCIDE 136
S K + + K +T P E C C K F+ HI+ H
Sbjct: 387 CGKSFKMACQLAMHSKKHTNADHPHE--------CSTCQKTFEGKLSLISHIKSEH---- 434
Query: 137 KGNPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISFSNVLKSQYSCLGCNQQFNTLH 196
P ++ + + C C+ + +++ + S+ + Y+C C++ F H
Sbjct: 435 ---PEFSSAPEPVDGTVGHSCPTCDRVFQTNANLERHQASHSEERPYTCSQCDKAFKAPH 491
Query: 197 LYELHI 202
LH+
Sbjct: 492 YLALHM 497
Score = 32.3 bits (70), Expect = 0.97
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 14 LTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLI-PHKKVIKVAHKM 72
LT KC C F N Q+L + H + K +V K + H K KV H
Sbjct: 940 LTFKCSHCNETFSNRQSL-----IEHHREVTAEGDFKCDVCEKCFITKAHLKTHKVVHTR 994
Query: 73 NKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSE-FECPVCSKIFKVYSWAWKHIQKY 131
+ NL K ++ P + ++ E + C VC K F S ++K +Y
Sbjct: 995 QPRCSSCKETFDSKENL--KQHSSAGCPEKSSQEREAYTCQVCDKAFSRVS-SYKTHFRY 1051
Query: 132 HCID 135
H D
Sbjct: 1052 HSKD 1055
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 157 CIACNVLIKSDDHTCGISFSNVLKSQYSCLGCNQQFNTLHLYELHIAGLHSEGAENLFFP 216
C C L + + S++SC CN+ F T H E H + +HS E + P
Sbjct: 1316 CTECGKLFSGNKALKRHRLVHTSGSKFSCAICNKAFKTKHHMERH-SKIHSRDIEGIACP 1374
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 37.5 bits (83), Expect = 0.026
Identities = 48/217 (22%), Positives = 79/217 (36%), Gaps = 33/217 (15%)
Query: 17 KCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIA------KRKLIPHKKVIKVAH 70
KCD C F + L SH H +R+ RP T I L H K++
Sbjct: 114 KCDECGKSFGYLHTLNSHMENMH---QRV--RPHTCDICGAYFRTSNALRCHGKIVHEGV 168
Query: 71 KMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQK 130
+ K + + T K YN + I S + ++C +C K F + +H
Sbjct: 169 RPYKCEQCSGTFKDN-------YNLRHHIQSVHLGERPYKCNLCGKCFSMSHTLKRHQAT 221
Query: 131 YHCIDEKGNPVLP------TSKDIIK-------PVRIERCIACNVLIKSDDHTCGISFSN 177
H +EKG + S D+++ ++ +C C+ H S
Sbjct: 222 LHFGEEKGFECIQCGHRFRRSSDLVRHVSSVHSKIKPHKCQECSKAFSRKSHLRNHILSM 281
Query: 178 VLKSQYSCLGCNQQFNTLHLYELHIAGLHSEGAENLF 214
Q+ C C + F++ + H +H G +N F
Sbjct: 282 HTHDQFECEQCQKFFDSYNQLHNHQKTIH--GGKNPF 316
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 37.5 bits (83), Expect = 0.026
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 22/206 (10%)
Query: 9 LRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKR-KLIPHKKVIK 67
L +++ KC C+ FK AL SHQ V H K + + A++ +L H+ +K
Sbjct: 557 LHTEKRPFKCPNCSKAFKTSYALTSHQ-VTHSASKPYKCQECGQEFARQSQLNDHR--LK 613
Query: 68 VAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKH 127
+ E S + +++R T SED ++C VC K +K Y KH
Sbjct: 614 HTGETPFVCEVCSKSFTTSRSMVRHMLTH----SED---RPYQCDVCGKSYKCYEALTKH 666
Query: 128 I-----QKYHC-IDEKGNPVLPTSKDII-----KPVRIERCIACNVLIKSDDHTCGISFS 176
+ Y C + +K D + +I RC+ C+ + +
Sbjct: 667 TTTHSKKPYKCNVCDKSYTRQKMLTDHMYSHEESGTKIYRCVLCDDVFDQIKELTKHQRT 726
Query: 177 NVLKSQYSCLGCNQQFNTLHLYELHI 202
+ + Y C C+++F + + H+
Sbjct: 727 HKTDAVYKCQECDKKFRRISGLKDHL 752
Score = 29.5 bits (63), Expect = 6.9
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 13/104 (12%)
Query: 17 KCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTS 76
+CD C GFK + H+A+ H K+ ++ + +V A K K
Sbjct: 537 RCDLCTKGFKRRSCMTRHRAL-HTEKRPFKCPNCSKAFKTSYALTSHQVTHSASKPYKCQ 595
Query: 77 E--NASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIF 118
E ++SQ ++ K+ +TP F C VCSK F
Sbjct: 596 ECGQEFARQSQLNDHRLKHTGETP----------FVCEVCSKSF 629
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 37.5 bits (83), Expect = 0.026
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 16/119 (13%)
Query: 17 KCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAK-RKLIPHKKVIKVAHKMNKT 75
KC TC F+ LR+H + H +KR + + A+ H+K +H K
Sbjct: 736 KCTTCDKWFRTASQLRTHSLI-HEEEKRFSCEKCGKKFAQVASYCRHRK----SHDGIKD 790
Query: 76 SE-NASTKK-SQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYH 132
N KK +Q ++L+R + T GK+ F+CP CS+ F W KHI+ H
Sbjct: 791 YLCNICNKKFTQSNSLVRHMRSHT------GKK--FDCPECSRQFVESWWLKKHIELKH 841
>SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1741
Score = 35.1 bits (77), Expect = 0.14
Identities = 31/122 (25%), Positives = 42/122 (34%), Gaps = 9/122 (7%)
Query: 18 CDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKT------EVIAKRKLIPHKKVIKVAHK 71
C+ C GF L+ HQ H K +I K E K K I + +
Sbjct: 827 CNICGAGFSKSLTLKKHQRKTHRRKNKILSSAKNSSSKLMETFPKSKTINPQSISVYCCS 886
Query: 72 MNKTSENASTKKSQPHNLLRKYNTKTPIPS-EDGKQSEFECPVCSKIFKVYSWAWKHIQK 130
+ S S S+ H R + K I S + F C C F++ HI K
Sbjct: 887 ICGASFGKSKALSRHHR--RIHRGKNIIKSGSTENEGPFMCKTCQNSFEIKGEFVAHINK 944
Query: 131 YH 132
H
Sbjct: 945 QH 946
Score = 30.7 bits (66), Expect = 3.0
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 8 KLRSQRLTCKCDTCALGFKNVQALRSHQAVAH--PLKKRIAYRPKTEVIAKRKLIPHKKV 65
K+RSQ + +C++C + + L+ H+A+ H P K + + KL H ++
Sbjct: 1436 KVRSQEMF-QCESCKKVYNTERGLKYHRALQHWKPSKDNLQRK-----FIGSKLQSHDRI 1489
Query: 66 IKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAW 125
H+ + + + H++ +N KT K + F C C + +S
Sbjct: 1490 NVKPHQCIVCRKGFTARSRLLHHVKAHHNMKT-------KSNIFTCKYCGRAITNHSDFL 1542
Query: 126 KHIQKY 131
H++++
Sbjct: 1543 LHVERH 1548
Score = 29.1 bits (62), Expect = 9.1
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 6/122 (4%)
Query: 1 MGSKIPGKLRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYR-PKTEVIAKRKL 59
M SK + Q+ KCD C F + L+ H ++ H + +KL
Sbjct: 1246 MDSKEASTVDEQK-PLKCDLCKKKFNTLLGLKFHHSLRHGQHSPEEFNGDAASTTGNQKL 1304
Query: 60 IPHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFK 119
+ K KT + +S H + + + + S K F+C +C + +
Sbjct: 1305 FK----CDICEKEFKTHVGLNFHRSIRHGINTRKESDGKVASTASKHKLFKCVLCKREYN 1360
Query: 120 VY 121
+
Sbjct: 1361 TH 1362
>SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 34.3 bits (75), Expect = 0.24
Identities = 47/199 (23%), Positives = 69/199 (34%), Gaps = 31/199 (15%)
Query: 17 KCDTCALGFKNVQALRSHQAV-AHPLKKRIAY----RPKTEVIAKRKLIPHKKVIKVAHK 71
KCD C FK ++L+ H V P + + Y P T +A R + H+ HK
Sbjct: 158 KCDYCEKDFKYAKSLKQHIEVHCDPKRVKCNYCCIDLPSTSKLANRVVKRHRG----EHK 213
Query: 72 MNKTSENASTKKSQPHNLLRKYNT--KTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQ 129
K ++ +P L R T P + F+C C K FK +H +
Sbjct: 214 PEK-CDHCGRSFFKPGVLQRHIKTIHSGDKPEWQSNEKLFKCDKCDKDFKTERSVRRHKR 272
Query: 130 KYHCIDEKGNPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISFSNVLKSQYSCLGCN 189
H K P S I+ + K + HT + + C CN
Sbjct: 273 TVH---NKSCPKPAVSTQGIQTTHDDE--------KPERHT--------TEKLFDCCYCN 313
Query: 190 QQFNTLHLYELHIAGLHSE 208
+ F HI +H E
Sbjct: 314 KNFTAARSVRRHIRAVHKE 332
Score = 29.1 bits (62), Expect = 9.1
Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 4/160 (2%)
Query: 1 MGSKIPGKLRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLI 60
+ +++ + R + KCD C F L+ H H K ++ ++ K
Sbjct: 200 LANRVVKRHRGEHKPEKCDHCGRSFFKPGVLQRHIKTIHSGDKP-EWQSNEKLFKCDKCD 258
Query: 61 PHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKV 120
K + + +T N S K + P + F+C C+K F
Sbjct: 259 KDFKTERSVRRHKRTVHNKSCPKPAVSTQGIQTTHDDEKPERHTTEKLFDCCYCNKNFTA 318
Query: 121 YSWAWKHIQKYHCIDEKGNPVLPTSKDIIKPVRIERCIAC 160
+HI+ H + + +P K K + RC C
Sbjct: 319 ARSVRRHIRAVH-KESRSSP--ENKKSEKKSLECLRCGEC 355
>SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 33.9 bits (74), Expect = 0.32
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 23/218 (10%)
Query: 8 KLRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAK-RKLIPH-KKV 65
+L+ ++ T +C+ C F L++H H +KR K E+ K + H K+
Sbjct: 510 RLKKKKKTHQCEHCKKIFNRPHHLKAHVNTTHLGEKRF----KCEICEKCFGFLTHLKRH 565
Query: 66 IKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAW 125
+K H+ K K K + K S ++ F+C C+ +F
Sbjct: 566 VKTVHEKEKPHHCEKCGKCFSSTSYLKLHIK----SVHNEKKLFKCDQCNLLFSWQCSLK 621
Query: 126 KHIQKYHCIDEKGNPVLPTSK------DIIKPVRI----ERCIACNVLIKSDDHTCGIS- 174
HI++ H EK + K D++ R E+ C+V K + +S
Sbjct: 622 SHIREVHKDVEKRSKCDECQKCFHRHRDLLTHKRTVHKKEKPYKCDVCKKIFGLSSSLSR 681
Query: 175 -FSNVLKSQ-YSCLGCNQQFNTLHLYELHIAGLHSEGA 210
V + + + C C ++F+ + H+ G H E A
Sbjct: 682 HIRTVHQDKAFKCERCEKKFSQPYHLTRHVKGCHKEKA 719
Score = 29.5 bits (63), Expect = 6.9
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 44 RIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENASTKK--SQPHNLLRKYNTKTPIPS 101
++AY ++ K KK +K K KT + KK ++PH+L NT +
Sbjct: 489 QLAYFTSQDIEETVKASTQKKRLK---KKKKTHQCEHCKKIFNRPHHLKAHVNT-----T 540
Query: 102 EDGKQSEFECPVCSKIFKVYSWAWKHIQKYH 132
G++ F+C +C K F + +H++ H
Sbjct: 541 HLGEK-RFKCEICEKCFGFLTHLKRHVKTVH 570
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 33.9 bits (74), Expect = 0.32
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 97 TPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCIDEKGNPVLPTSKDIIKPVRIER 156
TP D K ++C C FK SW +H Q+ +C E + T ++ R +
Sbjct: 455 TPAAQSDNKDLPWKCEDCGLAFKWSSWLQRH-QRNNCHGESNKKAVVTVTSKMQAPRSDA 513
Query: 157 CIAC 160
AC
Sbjct: 514 PFAC 517
Score = 33.1 bits (72), Expect = 0.56
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 12/155 (7%)
Query: 8 KLRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIK 67
K++ R++ +CD C F L+ H+ V H ++ P E K I H
Sbjct: 325 KMKHPRVSYRCDECGRAFACPSWLKRHKRV-HGGSTDLS--PTEE---KPVPISHASANA 378
Query: 68 VAHKMNKTSENASTKKSQPHNLLRK---YNTKTPIPSEDGKQSEFECPVCSKIFKVYSWA 124
+ ++ + + P L R ++ P + D + F C +C + F V W
Sbjct: 379 LDETRPHICQDCGRRFAIPAWLTRHRMVHHKSAPQTTYDPSKP-FNCTICGRSFAVAYWL 437
Query: 125 WKHIQKYHCIDEKGNPVLPTSKDIIK--PVRIERC 157
+H + YH P+ P ++ K P + E C
Sbjct: 438 IRHQKMYHEEVIPPTPITPAAQSDNKDLPWKCEDC 472
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 33.5 bits (73), Expect = 0.42
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 93 YNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKY 131
YN KT + + G++ ++C CSK+F +S +H+Q++
Sbjct: 859 YNLKTHMRTHTGEKP-YKCDFCSKLFSQHSTLMQHVQRH 896
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 42 KKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPS 101
+KR RPK R+ P V + ++ KT E + T + ++ S
Sbjct: 424 EKRKVGRPKKI----RQADPSSLVTQQDNQAQKTPEASGTVAAGKQSVADNSRKTANGLS 479
Query: 102 EDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCIDEKGNP 140
E+ K++ +CP+C + F S H + H I ++G P
Sbjct: 480 EEEKKNRPKCPICDQTFDTQSGLDVH-GRIHRIRKRGRP 517
>SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 33.5 bits (73), Expect = 0.42
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 9 LRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKV 68
+ +++ KCDTC F LR H P ++ + + EV +R+ +K ++
Sbjct: 329 IHAEKKPHKCDTCGRTFNQKVCLRLHL----PCREHERRQKREEVRKRREEEQERKALRA 384
Query: 69 A-HKMNKTSENASTKK 83
A KM K++++ T K
Sbjct: 385 AERKMRKSTDSGKTNK 400
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 33.5 bits (73), Expect = 0.42
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 185 CLGCNQQFNTLHLYELHIAGLHSEGAENL 213
C CN+ F T HL + H+A HSE A+ L
Sbjct: 383 CERCNKWFGTDHLLKFHMAETHSEAAKGL 411
>SB_37120| Best HMM Match : EB (HMM E-Value=4.2)
Length = 376
Score = 33.5 bits (73), Expect = 0.42
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 17 KCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTS 76
K DTCA+G S A + +KK + T AK+K P K K K K
Sbjct: 276 KSDTCAVGL-------SDTAFVYTVKKATPTKKPTP--AKKKPAPKKPAAKKPAKAKKPG 326
Query: 77 ENASTKKSQPHNLLRKYNTKTPIPSEDG--KQSEFECPVCSKI 117
+S K + + + K K P + G + + +C +CS +
Sbjct: 327 AVSSASKLRCNAFVVKLKLKRTPPGKPGTHEYNAMKCSICSTV 369
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 33.5 bits (73), Expect = 0.42
Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 14/192 (7%)
Query: 17 KCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTS 76
+CD C FK + L H H +K ++ ++++ ++ H K
Sbjct: 147 ECDQCGRCFKKNETLDHHHQNTHSGEKPYQCTQCDKLFGSQEILDRH--VRAVHNQEKPF 204
Query: 77 ENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCIDE 136
+ + ++S + +T+ + + ECP C K+F +HI+ H
Sbjct: 205 KCSKCEESFGWPMQLTDHTRN---THAQVYTSKECPQCGKVFNRGRDTLRHIRAVH---- 257
Query: 137 KGNPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISFSNVLKSQYSCLGCNQQFNTLH 196
LP S + ++ E C C + D I + + C C++ F
Sbjct: 258 --RDTLPDS-ETVEDFECEHCKHC--FKRRRDRDLHIKVVHNRVKAFKCEHCHKVFGHSF 312
Query: 197 LYELHIAGLHSE 208
H+ HS+
Sbjct: 313 DRARHVKKFHSD 324
>SB_15832| Best HMM Match : zf-C2H2 (HMM E-Value=7e-35)
Length = 337
Score = 33.1 bits (72), Expect = 0.56
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 5/135 (3%)
Query: 2 GSKIPGKLRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIP 61
G +IPG+ LTC C + F + +L H H K++ + + ++ +
Sbjct: 7 GDEIPGEAEGVDLTCHWKDCTIVFDSQDSLVKHVNGDHIKKEKRDFTCYWQDCSREQRPF 66
Query: 62 HKKVIKVAHKMNKTSE--NASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPV--CSKI 117
+ + V H T E + + R N KT + S G++ + C V C+K
Sbjct: 67 KAQYMLVVHMRRHTGEKPHKCYHEGCTKAYSRLENLKTHLRSHTGER-PYVCEVEGCTKA 125
Query: 118 FKVYSWAWKHIQKYH 132
F S KH + H
Sbjct: 126 FSNASDRAKHQNRTH 140
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 32.7 bits (71), Expect = 0.74
Identities = 44/193 (22%), Positives = 68/193 (35%), Gaps = 16/193 (8%)
Query: 17 KCDTCALGFKNVQALRSH--QAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNK 74
KC C F + AL +H +P K + KR+ H +V +
Sbjct: 59 KCSICDEEFHDWNALMTHIRNQKNNPEHKNSCKECNVQFADKREKRRHVRVSHPPPQGEL 118
Query: 75 TSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCI 134
S H L T P DG F+CP C K F S KH++K+
Sbjct: 119 KCHICEKVYSNKHYLRDHIRTHNP----DG----FKCPECGKNFSSGSNLRKHVRKH--- 167
Query: 135 DEKGNPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISF-SNVLKSQYSCLGCNQQFN 193
+ G + + R C+ C L S + + F ++ + Y C C +F+
Sbjct: 168 -KPGYKPYKDKRVHLPRERKHECMECQKLFDS-PNALEVHFRTHTGERPYLCEKCEWKFS 225
Query: 194 TLHLYELHIAGLH 206
E H+ +H
Sbjct: 226 QKGHLERHMRTVH 238
>SB_21191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 32.7 bits (71), Expect = 0.74
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 129 QKYHCIDEKGNPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISFSNVLKSQYSCL-G 187
+KY N ++ KD+I ++E C V I D G++F+ L L G
Sbjct: 90 EKYATSLANANDLIGALKDVIHETKVEMCKPGKVFIARDTRPSGLAFTKALMDGIQALGG 149
Query: 188 CNQQFNTLHLYELH 201
+ L +LH
Sbjct: 150 LYHDYGVLTTPQLH 163
>SB_12745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 32.7 bits (71), Expect = 0.74
Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 18/186 (9%)
Query: 18 CDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSE 77
CD C +K + LR+H + + K+R +V + + + +VI + + E
Sbjct: 261 CDECGKVYKTAKLLRTHAKIHN--KQRFPCPQCDKVFSSKGFLAKHEVIHSDQRPHVCME 318
Query: 78 -NASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCIDE 136
S K + + K +T P E C C K F+ HI+ H
Sbjct: 319 CGKSFKMACQLAMHSKKHTNADHPHE--------CSTCQKTFEGKLSLISHIKSEH---- 366
Query: 137 KGNPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISFSNVLKSQYSCLGCNQQFNTLH 196
P ++ + + C C+ + +++ + S+ + Y+C C++ F H
Sbjct: 367 ---PEFSSAPEPVDGTVGHSCPTCDRVFQTNANLERHQASHSEERPYTCSQCDKAFKAPH 423
Query: 197 LYELHI 202
LH+
Sbjct: 424 YLALHM 429
>SB_31772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 32.3 bits (70), Expect = 0.97
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 380 KKTSTDDIVEDESKLDTEMKTKVPVKTYSN-TRKNVKFEDNKIGSPKFGSPASLTSFNDS 438
K T TD+ +ED KL T++ P ++S+ TR K+ + + S FG+ SF+ S
Sbjct: 120 KITFTDNFLEDFRKLPTKITNAEPASSWSDYTRFVKKYGTHMVTSVVFGASIHSYSFSRS 179
Query: 439 YRHFVE 444
+ + +
Sbjct: 180 TKPYTQ 185
>SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32)
Length = 323
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 76 SENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCID 135
+E K + R Y K + + D F C C KIF S+ +H+ KY C D
Sbjct: 180 NEGLDIKVEKKSKFYRWY-LKKKLSTMDPDDESFTCYKCGKIFAYQSYLDRHV-KYVCPD 237
Query: 136 EKG 138
+ G
Sbjct: 238 KTG 240
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.5 bits (68), Expect = 1.7
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 26 KNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENASTKKSQ 85
K + + Q+ + +R+ RP + + KK K HK+ K + + S+K+S+
Sbjct: 287 KESTKVEASQSASFVESERLGPRPSVIAVGRISGALDKKR-KKTHKVQKHTSSESSKQSE 345
Query: 86 PHNLLRKYNTKTPIPSEDGKQS--EFECPVCSKIFKVYSWAWKHIQKYH 132
P + + T S K+S E PV SK + S K I+K H
Sbjct: 346 PVTFVINLDKSTRKTSRSLKKSTKELTIPVASKTYPKASKTDK-IKKSH 393
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 31.5 bits (68), Expect = 1.7
Identities = 37/136 (27%), Positives = 53/136 (38%), Gaps = 20/136 (14%)
Query: 17 KCDTCALGFKNVQALRSHQAVA--------HPLKK-RIAYR--PKTEVIAKRKLIPHKKV 65
KCD C F + LR H P+ + R P + K L KK
Sbjct: 862 KCDECGNTFGRLSHLRKHVRKVCGNRRNKDRPIAQCRFCEENFPTKGDLRKHVLTCDKKE 921
Query: 66 IKVAHK--MNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSW 123
KV K + S + P+NL R T T + F+C VC++ FK S
Sbjct: 922 EKVKSKEVTLHVCDQCSKDFASPYNLRRHQLTHTD-------EKPFQCEVCARQFKEKSS 974
Query: 124 AWKHIQKYHCIDEKGN 139
KHI++ H ++G+
Sbjct: 975 LSKHIKRKHTGVDQGS 990
>SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 31.5 bits (68), Expect = 1.7
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 18 CDTCALGFKNVQALRSHQAV-AHPLKKRIA-YRPKTEVIAKRKLIPHKKVIKVAHKMNKT 75
CD C F+ L +HQ V KKR PK + K+K KK K KMN T
Sbjct: 310 CDVCHRYFRTQTCLENHQRVKPRGAKKRCGDALPKKKKKKKKKKKKKKKKKKKKKKMNST 369
Query: 76 SEN 78
++
Sbjct: 370 DDD 372
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 31.5 bits (68), Expect = 1.7
Identities = 37/150 (24%), Positives = 62/150 (41%), Gaps = 10/150 (6%)
Query: 110 ECPVCSKIFKVYSWAWKHIQKYHCIDEKGNPVLPTSKDIIKPVRIERCIACNVLIKSDDH 169
+C CS+ F YS KH +H K N S +K + + IA + S +
Sbjct: 291 QCTFCSRSFHDYSSLAKHTT-WHRKRLKLN-----SPQDVKAIPSQTAIANDAHRVSQNK 344
Query: 170 TCGISFSNVLKSQYSCLGCNQQFNTLHLYELHIAGLHSEGAENLFFPDEAAFSAWRQDTE 229
T S S+ + C C++ FN+ H A H + ++ + A A E
Sbjct: 345 TPAASSSSSASGDHQCTQCSKSFNSGSSLARHFA-WHKKASDVQCHENSTA--ALDSQVE 401
Query: 230 KRCDIKYTTLSKIDNMQIYHCSHMKCDSST 259
++ + K + + D+ + HCS DSS+
Sbjct: 402 EKPNAKPSKMEFSDH-KCTHCSLAFKDSSS 430
>SB_45123| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 336
Score = 31.1 bits (67), Expect = 2.2
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 30/191 (15%)
Query: 66 IKVAHKMNKTSENASTKKSQP--HN-------LLRKYNTKTPIPSEDGKQSE-FECPVCS 115
+ A+++NKTS+N +KS+ H KY + D +S F C +C
Sbjct: 143 VSKANRINKTSKNKLKEKSEKAIHRCDQCGKIFKTKYTLSIHLKMPDHTESRPFVCNICG 202
Query: 116 KIFKVYSWAWK----HIQK--YHC-IDEKGNPVLPTSKDIIKPVRIERCIACNVLIKSDD 168
K F++ S + H QK + C + K T K ++ E+ C++ K
Sbjct: 203 KGFRLSSTLCRHKIIHTQKKPHKCEVCNKSFNRSSTLKTHVRTHSEEKAFVCDICGKG-F 261
Query: 169 HTCGISFSNVL----KSQYSCLGCNQQFNTLHLYELHIAGLHSEGAENLFFPDEAAFSAW 224
H G ++++ + + C C++ FN + + H +H+ +NL + +
Sbjct: 262 HQKGNLRNHIMIHTGEKPFQCTKCHRAFNKMSNLKFH---MHTH-TDNLPYQCKTC---- 313
Query: 225 RQDTEKRCDIK 235
R+ EK+ D+K
Sbjct: 314 RKKFEKKTDLK 324
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 31.1 bits (67), Expect = 2.2
Identities = 42/194 (21%), Positives = 72/194 (37%), Gaps = 14/194 (7%)
Query: 18 CDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSE 77
CD C F+ L SH+ VAH + I A L+ H +K+ H+ K +
Sbjct: 473 CDHCDKEFETSCQLGSHKKVAHDQETAICVHCNGRFPAS-DLLSH---VKMFHRDEKLVK 528
Query: 78 NASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCIDEK 137
KK + KY K I K F+C C+++ + +
Sbjct: 529 CNYCKK-----IFTKYGMKEHIEQVHNKPG-FKCAQCNQMIPSRQMRCHAKICFSASQQM 582
Query: 138 GNPVLPTSKDIIKPVRIERCIACNVLIKS-DDHTCGISFSNVLKSQYSCLGCNQQFNTLH 196
N + +++ K V RC CN + D + + + ++ + +C C + F
Sbjct: 583 QNNQMLRAQE--KQVTENRCKRCNERFNTFSDLSKHLDSDHEIEPR-TCEYCGKVFTLAK 639
Query: 197 LYELHIAGLHSEGA 210
H+ LH+ A
Sbjct: 640 YIPQHLKSLHNHPA 653
>SB_8254| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 684
Score = 31.1 bits (67), Expect = 2.2
Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 11/116 (9%)
Query: 17 KCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTS 76
KCD C F L HQ +H +K K + K P+ + + KT
Sbjct: 66 KCDLCEKRFTQPGHLNVHQR-SHYGEKAF----KCDQCCKTFYKPYGHLGGMCDGCTKTQ 120
Query: 77 ENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYH 132
EN KS L +P+ + K+ +EC C FK +H + YH
Sbjct: 121 ENYDISKSYLPQL-----ASSPLDTSSAKKP-YECEQCGHCFKQMFSLLQHAKTYH 170
>SB_50411| Best HMM Match : zf-C2H2 (HMM E-Value=1.3e-08)
Length = 108
Score = 30.7 bits (66), Expect = 3.0
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 7 GKLRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKK 64
GKLR ++T CDTC+ F L H+ H + + R + K L H+K
Sbjct: 29 GKLRDFKMTFVCDTCSKEFTQETNLVRHKKAIHGNRVFVCERCQKSFNRKDILKRHEK 86
>SB_5863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 30.7 bits (66), Expect = 3.0
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 72 MNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEF 109
+NK+S + TK+SQPH L + T IP E ++S+F
Sbjct: 445 INKSS-GSETKQSQPHPLQDPDYSHTGIPREPSQESDF 481
>SB_5953| Best HMM Match : FeS (HMM E-Value=5.5)
Length = 424
Score = 30.7 bits (66), Expect = 3.0
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 68 VAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYS 122
+ + ++ T+ +++ QP L T PIPS + E CP C F++++
Sbjct: 183 ILNDLSATTSGERSRQQQPAGLA----TTPPIPSPTDRAKEATCPECRHTFRLFT 233
>SB_19685| Best HMM Match : Retrotrans_gag (HMM E-Value=0.061)
Length = 335
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 11/76 (14%)
Query: 63 KKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVY- 121
+ + +H ++ S KK+ PH P P + + E CP C K FK++
Sbjct: 227 RNALPPSHSLSAVSSFQRQKKNPPH--------PAPSPPQADQAKEATCPGCQKTFKLFT 278
Query: 122 --SWAWKHIQKYHCID 135
+ W CID
Sbjct: 279 EGARGWNKKPHQLCID 294
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 53 VIAKRKLIPHKKVIKVAHKMNKTSENASTKK--SQPH--NLLRKYNTKTPIPSEDGKQSE 108
V +KR + K + A N+ +++AS +K QP + + N + + + SE
Sbjct: 191 VKSKRDALKRKTTRQAASSGNE-NKSASERKVCEQPEASSSVEMPNIECKVVDDKLDNSE 249
Query: 109 FECPVCSKIF 118
+CPVCSK+F
Sbjct: 250 SKCPVCSKVF 259
>SB_42412| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-33)
Length = 644
Score = 29.9 bits (64), Expect = 5.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 102 EDGKQSEFECPVCSKIFKVYSWAWKHIQKY 131
+D + ++C VC ++FK + KHI+ +
Sbjct: 319 KDASEKSYDCRVCERVFKSHELLEKHIKNH 348
>SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 338 GKSLHVKENVLK--LLYGKALEMASLLNDEAGCKIECQNGKELAKKTSTDDIVEDESKLD 395
GKS+ + L G+ ++ + E G K + + KTS+ + D+S D
Sbjct: 923 GKSIQINSTTTPGTLSAGQDYSSSASNDTEKGAKEVERTNDSVKSKTSSSPMEIDDSMSD 982
Query: 396 TEMKTKVPVKTYSNTRKNVKFEDNKIGSPK 425
KT+ V ++ T K +++ NK+ S K
Sbjct: 983 KSHKTESEVLDFAITEKQLEYV-NKLQSEK 1011
>SB_14155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 29.9 bits (64), Expect = 5.2
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 53 VIAKRKLIPHKKVIKVAHKMNKTSENASTKK--SQPH--NLLRKYNTKTPIPSEDGKQSE 108
V +KR + K + A N+ +++AS +K QP + + N + + + SE
Sbjct: 191 VKSKRDALKRKTTRQAASSGNE-NKSASERKVCEQPEASSSVEMPNIECKVVDDKLDNSE 249
Query: 109 FECPVCSKIF 118
+CPVCSK+F
Sbjct: 250 SKCPVCSKVF 259
>SB_52319| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 1458
Score = 29.5 bits (63), Expect = 6.9
Identities = 16/68 (23%), Positives = 24/68 (35%)
Query: 163 LIKSDDHTCGISFSNVLKSQYSCLGCNQQFNTLHLYELHIAGLHSEGAENLFFPDEAAFS 222
L+ + H I +L + C GC Q+FN Y H+ G + F
Sbjct: 402 LVDFEGHCFFIKNIELLTEHWECSGCEQRFNRHDNYNRHVTEKRCSGGKTQLICKGEKFK 461
Query: 223 AWRQDTEK 230
+EK
Sbjct: 462 HIMSSSEK 469
>SB_45976| Best HMM Match : MBT (HMM E-Value=0)
Length = 839
Score = 29.5 bits (63), Expect = 6.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 374 NGKELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVKF 416
NGKE + E +S DT K++VP KT ++T N F
Sbjct: 112 NGKEHLDDDEMKGVEEKKSSKDTLGKSEVPAKTNTSTPTNDPF 154
>SB_34889| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 615
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 77 ENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIF 118
E STK Q ++K N+KTP D + + ECP C+K F
Sbjct: 343 EQRSTKIGQLS--IKKSNSKTPA---DDRTRDHECPTCAKRF 379
>SB_31268| Best HMM Match : zf-C2H2 (HMM E-Value=5.04467e-44)
Length = 454
Score = 29.5 bits (63), Expect = 6.9
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 15/113 (13%)
Query: 18 CDTCALGFKNVQALRSHQAV---AHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNK 74
C C + L++HQ V P K I RP + L HK+V H K
Sbjct: 312 CGVCGKKYARAFTLKTHQRVHTGEKPFKCPICGRPFAQ---SSGLESHKRV----HTGQK 364
Query: 75 TSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKH 127
+ ++ H+ K + +T G++ F+CP+C+K F S KH
Sbjct: 365 PYKCEVCERGFSHSSAVKNHMRT----HTGEKP-FQCPICNKKFADQSTVKKH 412
>SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 29.5 bits (63), Expect = 6.9
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 26 KNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENASTKKSQ 85
K + + HQ K R Y TE +R+ K+ KV K +KT E KK Q
Sbjct: 605 KRERRQKRHQKKVRQPKMR--YGRSTEGEGRRERTEEKQEEKVPEKEDKTEELDEEKKRQ 662
Query: 86 PHNLLRKYNTKTPIPSEDGKQ-SEFE 110
N + P P Q EFE
Sbjct: 663 EENAKEATPERKPEPEMKPPQGKEFE 688
>SB_6911| Best HMM Match : Ank (HMM E-Value=0)
Length = 1961
Score = 29.5 bits (63), Expect = 6.9
Identities = 17/78 (21%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 155 ERCIACNVLIKSDDHTCGISFSNVLKSQYSCLGCNQQFNTLHLYELHIAGLHSEGAENLF 214
E + N+ IK HT + ++K++ +GCN++ L +Y + + S+ + F
Sbjct: 1558 EPSLITNLEIKLASHTAKFLLTKMIKTKPVPIGCNRRSKDLTIYHVAASRCMSDFVD--F 1615
Query: 215 FPDEAAFSAWRQDTEKRC 232
+ F+ + +D ++ C
Sbjct: 1616 LLTLSKFTKYLRDIDQDC 1633
>SB_30070| Best HMM Match : zf-C2H2 (HMM E-Value=4.79945e-42)
Length = 436
Score = 29.5 bits (63), Expect = 6.9
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 56 KRKLIPHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCS 115
K+ P K V K + S++ S + +P + + + +P+ S G +F C VC+
Sbjct: 228 KKSSQPQKPVEKKKVESESESDSESDTEKKPGSPAVE-SELSPVGSSQG---QFVCTVCN 283
Query: 116 KIFKVYSWAWKHIQKY 131
K F+ ++ KH+ +
Sbjct: 284 KTFRRKAYLRKHMNNH 299
>SB_2845| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 29.1 bits (62), Expect = 9.1
Identities = 25/131 (19%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 3 SKIPGKLRSQRLTCKCDTCALGFKNVQALRSH-QAVAHPLKKRIAYRPKTEVIAKRKLIP 61
+++ K + + T +C++C F + A ++H Q+ H + + KT ++ ++
Sbjct: 23 AEVDAKEQEKNTTMRCESCCKNFSSGNAFKNHMQSKKH--NEIVLRASKTSLLVRQPGNM 80
Query: 62 HKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVY 121
KKV K+A K+ + N++ + + I +D + +C C + Y
Sbjct: 81 TKKVEKIA------------KEDEEENMVEEDDEDGEIIEDDSLEIT-QCLFCPHESQTY 127
Query: 122 SWAWKHIQKYH 132
+H+ + H
Sbjct: 128 EENLRHMSRSH 138
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 29.1 bits (62), Expect = 9.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 17 KCDTCALGFKNVQALRSHQAVAHPLKK 43
KC C GF N+ AL+ H+ H K+
Sbjct: 458 KCTLCDKGFPNLSALKGHKLYVHGEKR 484
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 29.1 bits (62), Expect = 9.1
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 10 RSQRLTCKCDTCALGFKNVQALRSHQA-----VAHPLKK-RIAYRPKTEVIAKRKLIPHK 63
R ++ +CK T L ++ QA R QA + P + + A RP+ + +K K +K
Sbjct: 394 RKRQASCKTKTSKLQDQDKQAARPRQASLKTKASKPEDQDKQAARPR-QTSSKTKTSKNK 452
Query: 64 KVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQS 107
+ K K + + + +K Q + TKT P + KQ+
Sbjct: 453 RS-KQQEKDKQEQDKQAARKRQARTSQARCKTKTSKPQDQDKQA 495
>SB_27651| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 280
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 96 KTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYH 132
KT + + D K F+C +C K F YS + KYH
Sbjct: 76 KTHLCTHDKKPDNFKCELCEKSFG-YSAGLRQHMKYH 111
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,092,733
Number of Sequences: 59808
Number of extensions: 729251
Number of successful extensions: 2505
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 2323
Number of HSP's gapped (non-prelim): 201
length of query: 518
length of database: 16,821,457
effective HSP length: 85
effective length of query: 433
effective length of database: 11,737,777
effective search space: 5082457441
effective search space used: 5082457441
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -