Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001787-TA|BGIBMGA001787-PA|IPR007087|Zinc finger,
C2H2-type
(518 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 40 0.003
AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical ... 39 0.010
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 37 0.039
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 37 0.039
AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical ... 34 0.21
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 34 0.28
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 33 0.64
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 33 0.64
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 32 0.85
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 32 1.1
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 32 1.1
Z49071-7|CAA88876.2| 292|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical pr... 31 2.6
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 31 2.6
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 30 3.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 3.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 3.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 3.4
L14745-9|AAK71355.2| 380|Caenorhabditis elegans Hypothetical pr... 29 6.0
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 29 7.9
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 29 7.9
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 7.9
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 29 7.9
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 40.3 bits (90), Expect = 0.003
Identities = 37/157 (23%), Positives = 63/157 (40%), Gaps = 24/157 (15%)
Query: 68 VAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKH 127
++ +N E ++P N +RK+ S +F C +C K F + KH
Sbjct: 316 LSENINDIDEEIEFGTTEPPNKIRKH-------SRSRVHGDFSCEICLKTFTLRDNLRKH 368
Query: 128 IQKYHCIDEKGNPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISFS---------NV 178
++ YH E V+ ++ P E+ D+ TCG +F NV
Sbjct: 369 VRVYH--SENSQKVVKSTG----PKHQEQYKCDRKSKDGDETTCGKTFRTEQALHDHFNV 422
Query: 179 LKS--QYSCLGCNQQFNTLHLYELHIAGLHSEGAENL 213
YSC CNQ+F+ + +H++ H ++L
Sbjct: 423 HDGIKPYSCHTCNQKFHARDRFAVHLSKYHQTSIKDL 459
>AF125451-2|AAP82633.1| 167|Caenorhabditis elegans Hypothetical
protein Y37E11B.1b protein.
Length = 167
Score = 38.7 bits (86), Expect = 0.010
Identities = 34/118 (28%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 17 KCDTCALGFKNVQALRSHQAVAH-PLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKT 75
+C TC F N + LR HQ V P K I + +K L HK+ + +
Sbjct: 42 ECSTCQKRFHNAELLRKHQIVHDIPKKSIICEVCGKKYSSKSALAKHKRTHETDKRFTCP 101
Query: 76 SENASTKKSQPHNL-LRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYH 132
AS S P + LRK++ P F C C K F S +H+Q H
Sbjct: 102 MCYASFDLSDPFKIHLRKHDNLKP----------FGCSYCFKQFSSRSVCRRHVQLMH 149
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 36.7 bits (81), Expect = 0.039
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 12/130 (9%)
Query: 80 STKKSQPHNLLRKYNTKTPIPSEDGKQSEFEC-PVCSKIFKVYSWAWKHIQKYHCIDEKG 138
+T+ +P +YNTK + +C +C + +V + W H+ H
Sbjct: 148 ATESYEPSRRSSRYNTKKIEGKFMCSYNPTKCYKLCGSVVEVINHIWAHV--IH------ 199
Query: 139 NPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISFSNVLKSQYSCLGCNQQFNTLHLY 198
+P LP + K + + +C +L SD + + LK +C CN F T+HL
Sbjct: 200 DPPLPPIEK--KESKDDGMFSC-LLRNSDAAQLAENSALSLKRLQTCQFCNAVFRTVHLK 256
Query: 199 ELHIAGLHSE 208
+H+ H E
Sbjct: 257 TIHVVKCHME 266
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 36.7 bits (81), Expect = 0.039
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 12/130 (9%)
Query: 80 STKKSQPHNLLRKYNTKTPIPSEDGKQSEFEC-PVCSKIFKVYSWAWKHIQKYHCIDEKG 138
+T+ +P +YNTK + +C +C + +V + W H+ H
Sbjct: 149 ATESYEPSRRSSRYNTKKIEGKFMCSYNPTKCYKLCGSVVEVINHIWAHV--IH------ 200
Query: 139 NPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISFSNVLKSQYSCLGCNQQFNTLHLY 198
+P LP + K + + +C +L SD + + LK +C CN F T+HL
Sbjct: 201 DPPLPPIEK--KESKDDGMFSC-LLRNSDAAQLAENSALSLKRLQTCQFCNAVFRTVHLK 257
Query: 199 ELHIAGLHSE 208
+H+ H E
Sbjct: 258 TIHVVKCHME 267
>AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical
protein Y37F4.6 protein.
Length = 384
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 179 LKSQYSCLGCNQQFNTLHLYELHIAGLHSEGAENLFFPDEAAFSAWRQDTEKRCDIKYTT 238
LK+ Y C CN QF Y H+A H E +L+ + + K C + T
Sbjct: 211 LKAMYKCGLCNIQFAADQHYREHVA-THIEN-PHLWLVPTILYCV--KCNRKNCRFQRTR 266
Query: 239 LSKIDNMQIYHCSHM---KCDSSTASMCPSSFTKQEFSKGIQVVYYK 282
L ++ I H+ KC+ + + F QE+++ +Q+VY K
Sbjct: 267 LIELIPKLIQVTKHIKVEKCEKNPILLIWRLFLTQEYTEILQMVYMK 313
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 33.9 bits (74), Expect = 0.28
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 25/188 (13%)
Query: 17 KCDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTS 76
+C C FK + +L +H+ H + K I KR + K K + K
Sbjct: 405 QCPDCPTVFKKLGSLTAHKRACHLRTDTLKIPTKPLPIYKRHVC---KTCKREFRDAKML 461
Query: 77 ENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCIDE 136
E K + +LL ++ + + G E +C C K F + + H+QK+ +E
Sbjct: 462 E-----KHRRFHLLAEHRWRDALLLHGGGGGERKCTYCDKSFVLRASLVWHMQKHFEEEE 516
Query: 137 KGNPVLPTSKDIIKPVRIERCIACNVLIKSDDHTCGISFSNVLKSQYS--CLGCNQQFNT 194
+ + +P C C++ S + L Q+S C CNQ+F++
Sbjct: 517 Q------QQEHHHQPF----CALCDLNFFSQQ-----EYRQHLDEQHSVICAVCNQKFSS 561
Query: 195 LHLYELHI 202
+YE HI
Sbjct: 562 RQVYEDHI 569
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 32.7 bits (71), Expect = 0.64
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 47 YRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSE 102
+ PK+ V+A RK+IP KK + K++K + + KKS+ +K ++K+ + E
Sbjct: 458 FLPKSGVVAPRKIIP-KKPSENVEKVDKRFQKGTQKKSEAVVEKKKGSSKSAVSGE 512
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 32.7 bits (71), Expect = 0.64
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 47 YRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSE 102
+ PK+ V+A RK+IP KK + K++K + + KKS+ +K ++K+ + E
Sbjct: 458 FLPKSGVVAPRKIIP-KKPSENVEKVDKRFQKGTQKKSEAVVEKKKGSSKSAVSGE 512
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 32.3 bits (70), Expect = 0.85
Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 12/131 (9%)
Query: 101 SEDGKQSEFECPVCSKIFKVYSWAWKHIQKYHCIDEKGNPVLPTSKDIIKPVRIERCIAC 160
S KQ ++ C +C + F V+ KHI H ++ + SK + +C C
Sbjct: 324 SSRAKQMQYPCTLCGQAFAVHDRLAKHIASRH--RQRSCTLDDASK-------VHKCNMC 374
Query: 161 NVLIKSDDHTCGISFSNVLKSQYSCLGCNQQFNTLHLYELHIAGLHSEGAENLFFPDEAA 220
+ D + YSC CNQ F+ H L + E +
Sbjct: 375 SKSFSRSDMLTRHMRLHTGAKPYSCPTCNQVFSRSDHLSTH---LRTHTGEKPYACPMCN 431
Query: 221 FSAWRQDTEKR 231
+SA R+D R
Sbjct: 432 YSASRRDMISR 442
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 3 SKIPGKLRSQRL---TCKCDTCALGFKNVQALRSHQAVAHP 40
SK+ K R ++ C TC F ALR HQ+ AHP
Sbjct: 239 SKLESKTRHHKMHFTRSTCQTCMRFFTTEDALRHHQSTAHP 279
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 17 KCDTCALGFKNVQALRSH--QAVAHPLKKRIA-YRPKTEVIAKR-KLIPHKKVIKVAHKM 72
+C C F N + LR+H P + + ++ + E K+ P+ K ++ H
Sbjct: 28 QCQVCKRKFANQKTLRTHMKHITCRPGRSNVVNHKFRCENCEKQFTNKPNLKRHQITHSG 87
Query: 73 NKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPV--CSKIFKVYSWAWKHIQK 130
+K+ + ++ +++ R+ + + + ++S F+CPV CS F Y H+
Sbjct: 88 SKSKKCSTCQRT----FFREDQLQRHLHNHLKERSHFDCPVLNCSMQFVFYEGVENHLVN 143
Query: 131 YH 132
+H
Sbjct: 144 HH 145
>Z49071-7|CAA88876.2| 292|Caenorhabditis elegans Hypothetical
protein T22C8.4 protein.
Length = 292
Score = 31.1 bits (67), Expect = 2.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 63 KKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFK 119
KK+ K + + + T K + K N PSED K +C +C +FK
Sbjct: 112 KKLEKEQKEKARLKKREETLKKKSETAAAKKNKIVGAPSEDPKIRALQCDICFALFK 168
>Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical
protein C18D1.1 protein.
Length = 645
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 8 KLRSQRLTCKCDTCALGFKNVQALRSHQAVAH 39
K R LT +CDTC FK LR H+ H
Sbjct: 355 KEREGELTFRCDTCRTMFKTRNQLRQHRQDVH 386
>Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical
protein Y57G11A.3 protein.
Length = 298
Score = 30.7 bits (66), Expect = 2.6
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 218 EAAFSAWRQDTEKRC----DIKYTTLSKIDNMQIYHCSHMKCDSSTASMCPSSFTKQE 271
+AAF +Q+ +K C + Y + N +YH KC + P++F E
Sbjct: 178 KAAFQEVKQEEKKNCCICDKVVYPVEKVLANKNLYHIQCFKCCKCAKKLTPTNFNSHE 235
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 29 QALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSEN 78
QAL + Q + LKKR Y E +R I +K+ K+ K++KT E+
Sbjct: 70 QALMNQQMITQHLKKRNEYLDDLEEANERIKILDEKLDKLEAKISKTEES 119
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 82 KKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVYSWAWKHIQK 130
KK Q ++ L K+ TK + + D Q EF+C VC + + W +H++K
Sbjct: 312 KKYQHYHWLLKHRTKC-LETTDEIQ-EFKCNVCYRRYNSSFWFERHMEK 358
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.3 bits (65), Expect = 3.4
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 364 DEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVKFEDNKIG 422
D+A + E ++L + + E +SKL+TE KTK ++ S +K + ED K G
Sbjct: 10028 DKAHKQKESDEKQKLESEIAAKKSAEQKSKLETEAKTKKVIEDES-AKKQKEQEDKKKG 10085
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.3 bits (65), Expect = 3.4
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 364 DEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVKFEDNKIG 422
D+A + E ++L + + E +SKL+TE KTK ++ S +K + ED K G
Sbjct: 10048 DKAHKQKESDEKQKLESEIAAKKSAEQKSKLETEAKTKKVIEDES-AKKQKEQEDKKKG 10105
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.3 bits (65), Expect = 3.4
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 364 DEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVKFEDNKIG 422
D+A + E ++L + + E +SKL+TE KTK ++ S +K + ED K G
Sbjct: 10048 DKAHKQKESDEKQKLESEIAAKKSAEQKSKLETEAKTKKVIEDES-AKKQKEQEDKKKG 10105
>L14745-9|AAK71355.2| 380|Caenorhabditis elegans Hypothetical
protein C02F5.12 protein.
Length = 380
Score = 29.5 bits (63), Expect = 6.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 18 CDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEV 53
C C NV+ +RSH A AHP ++ Y K V
Sbjct: 273 CKLCGFECTNVRRMRSHYAKAHPNERVEGYGMKALV 308
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 29.1 bits (62), Expect = 7.9
Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 2/124 (1%)
Query: 61 PHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKV 120
P K + E A + + N LR P+ + D K+ + KI+
Sbjct: 32 PRSKRSAKQREPEDNGEPADSMSIEETNKLRASLGLAPLETNDNKERDANDGTNEKIYNE 91
Query: 121 YSWAWKHIQKYHCIDEKGNPVLPTSKDIIKPVR--IERCIACNVLIKSDDHTCGISFSNV 178
+ ++H + + D+K + +I K R + + L SD+ SF N
Sbjct: 92 DGFEFRHRKAENISDKKKEKDIKEKLEIAKAKRDVYSKVLKAKKLADSDEEDSAASFVNK 151
Query: 179 LKSQ 182
++ +
Sbjct: 152 MRQK 155
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 105 KQSEFECPVCSKIFKVYSWAWKHIQKYH 132
+ + FEC +C K + V S KHI++ H
Sbjct: 264 QSNRFECTICHKSYPVPSELRKHIKRVH 291
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 105 KQSEFECPVCSKIFKVYSWAWKHIQKYH 132
+ + FEC +C K + V S KHI++ H
Sbjct: 382 QSNRFECTICHKSYPVPSELRKHIKRVH 409
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 29 QALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSEN 78
QAL + Q + LKKR Y E +R I +++ K+ K++KT E+
Sbjct: 70 QALMNQQMITQHLKKRNEYLDDLEEANERIKILDEELDKLEAKISKTEES 119
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,789,505
Number of Sequences: 27539
Number of extensions: 556150
Number of successful extensions: 1933
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1877
Number of HSP's gapped (non-prelim): 72
length of query: 518
length of database: 12,573,161
effective HSP length: 85
effective length of query: 433
effective length of database: 10,232,346
effective search space: 4430605818
effective search space used: 4430605818
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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