Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001785-TA|BGIBMGA001785-PA|IPR007087|Zinc finger,
C2H2-type
(93 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 40 3e-04
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 36 0.004
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 33 0.023
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 31 0.094
01_05_0655 - 23972488-23973152,23973193-23973241,23973883-239739... 30 0.22
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 29 0.38
07_03_1165 - 24459156-24460139 29 0.50
01_06_1614 - 38648495-38649706 29 0.50
06_03_1478 - 30420097-30420651 28 1.2
02_05_0202 + 26708049-26709074 28 1.2
12_01_1076 + 11184047-11184270,11186178-11186352,11186554-111866... 27 1.5
04_04_0734 + 27648661-27649596 27 1.5
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 27 1.5
08_02_1602 - 28148255-28149413,28151927-28152087 27 2.0
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 27 2.0
11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415 27 2.7
07_01_0385 - 2871628-2872131 27 2.7
05_04_0163 + 18652306-18652839,18653785-18653853,18655139-186552... 27 2.7
02_01_0007 - 48497-48880 27 2.7
11_08_0094 - 28314681-28314747,28315264-28315353,28315589-283157... 26 3.5
11_08_0066 - 28131521-28132012 26 3.5
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 26 3.5
07_01_0015 + 108338-109186 26 3.5
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 26 3.5
04_04_0318 + 24347364-24348826,24348920-24349048,24349158-243492... 26 3.5
04_01_0082 + 897026-897028,897101-897350,898454-898608,898686-89... 26 3.5
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 26 3.5
05_05_0145 - 22690212-22690472,22690701-22690818,22691125-226912... 26 4.6
01_01_0170 + 1442526-1442618,1442705-1444210,1444312-1444365 26 4.6
10_08_0364 + 17217631-17217833,17218134-17218308,17218391-172184... 25 6.1
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 25 6.1
08_02_0702 - 20179838-20180040,20180397-20180464,20180642-201809... 25 6.1
07_03_1343 - 25905475-25905678,25907025-25907167,25907273-259073... 25 6.1
05_03_0372 + 13181649-13182321,13183149-13183213 25 6.1
03_04_0187 - 18236041-18236643 25 6.1
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 25 6.1
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 25 6.1
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 25 6.1
12_01_0986 - 10009518-10009839,10009958-10011544,10012515-10013311 25 8.1
11_04_0142 + 14027726-14029081 25 8.1
10_08_0281 - 16459830-16459838,16460000-16460173,16461023-164610... 25 8.1
10_08_0277 - 16437023-16437304,16437687-16437833,16440169-164403... 25 8.1
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 25 8.1
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 25 ELKNNFPCSV--CQKVFRWKNSLKRHTEVHLAKDTTEAAYCE-SCGIGFKSVCSFQRHMK 81
E K F C C K F++ + L++H E H+ D +E CE C F ++ + H K
Sbjct: 348 ESKKEFICPEENCGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHNK 407
Query: 82 NSLKHVTHD 90
+ +HV D
Sbjct: 408 SCHRHVVCD 416
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 35.9 bits (79), Expect = 0.004
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 35 CQKVFRWKNSLKRHTEVHLAKDTTEAAYCE-SCGIGFKSVCSFQRHMKNSLKHVTHD 90
C KVF++ + +K+H E H+ D E CE C F +V + H + ++V D
Sbjct: 161 CNKVFKYASKMKKHEESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQYVQCD 217
Score = 32.3 bits (70), Expect = 0.054
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 32 CSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYC--ESCGIGFKSVCSFQRHMKNSLKHVTH 89
C +C + KN +KRH H +TE C E C F + + +H+K S H
Sbjct: 216 CDICGEKHLKKN-IKRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKAS-----H 269
Query: 90 DQRK 93
DQ K
Sbjct: 270 DQVK 273
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 33.5 bits (73), Expect = 0.023
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 35 CQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHMKNSLKHVTHDQRK 93
C+K F+W + H VH E CG F+ V F RH K H + +RK
Sbjct: 1290 CKKAFKWPWARTEHMRVHTGVRPYECQE-PGCGQTFRFVSDFSRH-KRKTGHSSDKRRK 1346
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 31.5 bits (68), Expect = 0.094
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 23 VHELKNNFPC--SVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHM 80
VH + F C C F+W + H VH + + + CG F+ V + RH
Sbjct: 840 VHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKCS-APDCGQSFRYVSDYSRHR 898
Query: 81 K 81
K
Sbjct: 899 K 899
>01_05_0655 -
23972488-23973152,23973193-23973241,23973883-23973940,
23974184-23974215,23975961-23976040,23976509-23977898
Length = 757
Score = 30.3 bits (65), Expect = 0.22
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 2 NRLRGNLPSASYQTRLLFRSAVHELKNNFPCSVCQ 36
N+L GN+PS S Q+ ++F + + L + P S+ +
Sbjct: 179 NKLSGNIPSISIQSLVVFNVSDNNLNGSIPASLAR 213
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 29.5 bits (63), Expect = 0.38
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHMKNSLKHVTHD 90
P C F+W + H VH D + C F+ V F RH K H
Sbjct: 1142 PWKGCNMAFKWPWARTEHLRVHTG-DRPYVCHEPGCAQTFRFVSDFSRH-KRKTGHSVKK 1199
Query: 91 QRK 93
++K
Sbjct: 1200 KKK 1202
>07_03_1165 - 24459156-24460139
Length = 327
Score = 29.1 bits (62), Expect = 0.50
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 29 NFPCSVCQKVFRWKNSLKRHTEVHLAKDTTE 59
+FPC +C K F + ++ H VH A++ E
Sbjct: 112 SFPCHLCNKEFGSRKAVHGHMRVHHAENEKE 142
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 27 KNNFPCSVCQKVFRWKNSLKRHTEVHLAKD 56
K PC+VC K + +L H H KD
Sbjct: 215 KGKHPCNVCGKEYPTGVALGGHKRKHYRKD 244
>01_06_1614 - 38648495-38649706
Length = 403
Score = 29.1 bits (62), Expect = 0.50
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKS 72
FPC VC K F + ++ H VH A E +G+ S
Sbjct: 105 FPCHVCSKEFGSRKAVHGHMRVHQADKDKEKEPSLHLALGWTS 147
>06_03_1478 - 30420097-30420651
Length = 184
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 11 ASYQTRLLFRSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVH 52
AS++ +L +A E +PC +C + F + ++ H H
Sbjct: 37 ASWREKLADMAAADERAGRYPCPLCDRHFPTEKAVHGHMRSH 78
>02_05_0202 + 26708049-26709074
Length = 341
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 23 VHELKNNFPCSVCQKVFRWKNSLKRHTEVHL 53
V E + F C C+KVFR +L H H+
Sbjct: 191 VPEKRTRFQCPACKKVFRSYQALGGHRASHV 221
>12_01_1076 +
11184047-11184270,11186178-11186352,11186554-11186637,
11186712-11186953,11187029-11187266,11187814-11187893,
11187968-11188052,11188148-11188279,11188358-11188471,
11189550-11189594,11189840-11189924,11190043-11190102,
11190178-11190317
Length = 567
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHL---AKDTTEAAYCES-CGIGFKSVCSFQRH 79
P S C+K+ W++ LK E L AKD C + +G K + H
Sbjct: 370 PMSTCRKIVNWRSHLKFPEEAKLSPEAKDLISKLLCNADLRLGTKGAHEIKAH 422
>04_04_0734 + 27648661-27649596
Length = 311
Score = 27.5 bits (58), Expect = 1.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 21 SAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHL 53
+A + + F C C+KVFR +L H H+
Sbjct: 165 AAAAQKRTRFQCPACKKVFRSYQALGGHRASHM 197
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHMK 81
P C F+W H +VH K + C +K V F RH +
Sbjct: 596 PWEGCSMAFKWSWDRGEHFQVHAGKRPYKCT-TPGCSKIYKFVSDFTRHKR 645
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 22 AVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFK 71
+VH+ KN C + FR L+RH +H D E C + FK
Sbjct: 558 SVHK-KNTCTVKSCGRHFRSHKYLRRHQSIH-NDDMPYKCPWEGCSMAFK 605
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 27.1 bits (57), Expect = 2.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 62 YCESCGIGFKSVCSFQRHMK 81
YC+ CG GFK + + HM+
Sbjct: 259 YCQVCGKGFKRDANLRMHMR 278
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 27.1 bits (57), Expect = 2.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 62 YCESCGIGFKSVCSFQRHMK 81
YC+ CG GFK + + HM+
Sbjct: 323 YCQVCGKGFKRDANLRMHMR 342
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 32 CSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSV---CSF 76
C VC K F+ +L+ H H + AA S G G ++ CS+
Sbjct: 324 CQVCGKGFKRDANLRMHMRAH-GDEYKTAAALTSTGAGMRAAARRCSY 370
>11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415
Length = 1490
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 2 NRLRGNLPSASYQTRLLFRSAVHELKNNFPCSVCQKVFRWKNSLKRHTE 50
N L G +PS + + L ++ KNN S+ Q++ KN ++ H E
Sbjct: 494 NNLSGPIPSELFNIQTL-SIMINVSKNNLEGSIPQEIGHLKNLVEFHAE 541
>07_01_0385 - 2871628-2872131
Length = 167
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVH 52
FPC C K FR +L H H
Sbjct: 47 FPCLFCAKTFRKSQALGGHQNAH 69
>05_04_0163 +
18652306-18652839,18653785-18653853,18655139-18655270,
18655424-18655477,18655570-18655614,18656166-18656305,
18657107-18657232,18657325-18657361
Length = 378
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 38 VFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGF--KSVCSFQRHMKNSLKHV 87
+FRW E LA D A CG+G K+ ++R +N +K +
Sbjct: 143 LFRWLLQFGGFKERLLADDLFLAKVAMECGVGIFTKTAAEYERRRENFVKEL 194
>02_01_0007 - 48497-48880
Length = 127
Score = 26.6 bits (56), Expect = 2.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 29 NFPCSVCQKVFRWKNSLKRHTEVH 52
++PC C++ FR +L H VH
Sbjct: 28 SYPCGFCRREFRSAQALGGHMNVH 51
>11_08_0094 -
28314681-28314747,28315264-28315353,28315589-28315725,
28317020-28317589
Length = 287
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVH 52
+ CS CQ+ FR +L H VH
Sbjct: 53 YTCSFCQREFRSAQALGGHMNVH 75
>11_08_0066 - 28131521-28132012
Length = 163
Score = 26.2 bits (55), Expect = 3.5
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 9/61 (14%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAA---------YCESCGIGFKSVCSFQRHM 80
F C C + F +L H HL T + CE CG+GF+ + HM
Sbjct: 71 FECRTCGRRFPSHQALGGHRTSHLRPTTNKRRPGPSKPLIHACEVCGLGFQMGQALGGHM 130
Query: 81 K 81
+
Sbjct: 131 R 131
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C VC K F+ + +L+ H H
Sbjct: 46 NRFVCEVCNKGFQREQNLQLHRRGH 70
>07_01_0015 + 108338-109186
Length = 282
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 29 NFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCE 64
++ CS C++ FR +L H VH +D C+
Sbjct: 55 SYTCSFCRREFRSAQALGGHMNVH-RRDRARLRQCD 89
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C VC K F+ + +L+ H H
Sbjct: 41 NRFVCEVCNKGFQREQNLQLHRRGH 65
>04_04_0318 +
24347364-24348826,24348920-24349048,24349158-24349293,
24349447-24349535,24349631-24349742,24349836-24349942,
24350033-24350129
Length = 710
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 2 NRLRGNLPSASYQTRLLFRSAVHELKNN 29
NRLR P+AS+ R + A +L NN
Sbjct: 608 NRLRDKFPAASFSGRPILSEAGFDLLNN 635
>04_01_0082 +
897026-897028,897101-897350,898454-898608,898686-898967,
899078-899160,899335-899485,899896-899952,900279-900479
Length = 393
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 20 RSAVHELKNNFPCSVCQKVFRWKNSLKRH 48
RS V E++ F CS+C K ++ + + H
Sbjct: 192 RSEVKEIQKVFFCSLCNKQYKLAHEFESH 220
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C VC K F+ + +L+ H H
Sbjct: 93 NRFVCEVCNKGFQREQNLQLHRRGH 117
>05_05_0145 -
22690212-22690472,22690701-22690818,22691125-22691261,
22691743-22691844,22691921-22692001,22692325-22692394,
22692628-22692689,22692908-22693320,22693424-22693507,
22694180-22694272,22694376-22694427,22694542-22694608,
22694714-22694772,22694920-22695033,22695174-22695347,
22695444-22695935,22696021-22696090,22696649-22696692
Length = 830
Score = 25.8 bits (54), Expect = 4.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 40 RWKNSLKRHTEVHLAKDTTEAA--YCESCGIGFKSV 73
RWKN L+R +E ++ EAA +S GIG S+
Sbjct: 47 RWKNFLERQSEPSGQEEKGEAAGRVVDSSGIGGSSL 82
>01_01_0170 + 1442526-1442618,1442705-1444210,1444312-1444365
Length = 550
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 56 DTTEAAYCESCGIGFKSVCSFQRHMKNSLKHVTHDQRK 93
D E G G C +RH+ KHV Q +
Sbjct: 450 DLKECMMARGSGGGGADACGLERHLAGGRKHVVPKQER 487
>10_08_0364 +
17217631-17217833,17218134-17218308,17218391-17218474,
17218561-17218802,17218883-17219108,17219246-17219325,
17219408-17219492,17219665-17219796,17219927-17220040,
17220123-17220170,17220413-17220497,17220722-17220834
Length = 528
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 31 PCSVCQKVFRWKNSLKRHTEVHLAKDTTE 59
P + C+K+ W+ LK E L D +
Sbjct: 359 PMTTCRKIVNWRTHLKFPEEARLMTDAKD 387
>10_08_0022 -
14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C VC K F+ +L+ H H
Sbjct: 37 NRFVCEVCNKGFQRDQNLQLHRRGH 61
>08_02_0702 -
20179838-20180040,20180397-20180464,20180642-20180970,
20181058-20181258,20181369-20181501,20181576-20181619,
20181694-20181753,20181872-20181931,20182840-20182921,
20183292-20183368,20183649-20183726,20183997-20184143,
20184189-20184254,20184376-20184417,20184513-20184992
Length = 689
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 19 FRSAVHELKNNFPCSVCQKVFRWKNSLKRHTEV 51
F VH++++N S ++ +WK L + E+
Sbjct: 588 FEDKVHDIQDNPSISFSERQKKWKEELDQELEI 620
>07_03_1343 -
25905475-25905678,25907025-25907167,25907273-25907366,
25907526-25907687,25907884-25907952,25908631-25908843,
25909054-25909113,25909294-25909382,25909745-25910063
Length = 450
Score = 25.4 bits (53), Expect = 6.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 56 DTTEAAYCESCGIGFKSVCSFQRHMKN-SLKHVTHDQ 91
D+ + +CE C K QRHMK LKH D+
Sbjct: 203 DSPKLFFCEFCLNFMKRKEQLQRHMKKCDLKHPPGDE 239
>05_03_0372 + 13181649-13182321,13183149-13183213
Length = 245
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 21 SAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYC 63
SA+ +L N P C K+F K ++ + E +L + T + C
Sbjct: 146 SAIRQLGNGSPAVECLKIF-VKGVIEVYGEEYLRRPTVQDVEC 187
>03_04_0187 - 18236041-18236643
Length = 200
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 32 CSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESC-GIGFKSVCSFQRHMK 81
CSVC + F +L H H + + S G G SV +F ++K
Sbjct: 111 CSVCHRTFATGQALGGHKRCHYWDGLSVVSVTASASGSGSSSVRNFDLNLK 161
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 25.4 bits (53), Expect = 6.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 53 LAKDTTEAAYCESCGIGFKS 72
+A++++E YC SCG G ++
Sbjct: 431 VARNSSEGHYCGSCGFGCRT 450
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 35 CQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCG--IGFKSVCSFQRHMK 81
C K F + LKRH +H + + E CG + F + + HMK
Sbjct: 79 CDKKFLDSSKLKRHFLIHTGEKNFVCPH-EGCGKVLAFSLDFNLKAHMK 126
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVH 52
F C VC+K F N+L+ H H
Sbjct: 163 FSCPVCRKTFNRYNNLQMHMWGH 185
>12_01_0986 - 10009518-10009839,10009958-10011544,10012515-10013311
Length = 901
Score = 25.0 bits (52), Expect = 8.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 18 LFRSAVHELKNNFPCSVCQKVFRWKNSLK 46
L H++K F CS C V R N K
Sbjct: 204 LANQVYHKMKGQFDCSSCMPVSRNPNMTK 232
>11_04_0142 + 14027726-14029081
Length = 451
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 30 FPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAY 62
F C +C+K F + ++ H VH + Y
Sbjct: 117 FACRICRKEFDTRKAVDGHMRVHRQQSIATPKY 149
>10_08_0281 -
16459830-16459838,16460000-16460173,16461023-16461097,
16461484-16461636,16462319-16462582
Length = 224
Score = 25.0 bits (52), Expect = 8.1
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 4 LRGNLPSASYQTRLLFRSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYC 63
L GN A R S +H L+ NF V VF + + E+ A + + C
Sbjct: 81 LSGNAEGAMQSLRRELSSGMHPLRENFVALV--HVFAKNDLTTKGMEILAAMERYKYGIC 138
Query: 64 ESC 66
+ C
Sbjct: 139 KIC 141
>10_08_0277 -
16437023-16437304,16437687-16437833,16440169-16440342,
16441192-16441266,16441653-16441805,16442488-16442751
Length = 364
Score = 25.0 bits (52), Expect = 8.1
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 4 LRGNLPSASYQTRLLFRSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYC 63
L GN A R S +H L+ NF V VF + + E+ A + + C
Sbjct: 81 LSGNAEGAMQSLRRELSSGMHPLRENFVALV--HVFAKNDLTTKGMEILAAMERYKYGIC 138
Query: 64 ESC 66
+ C
Sbjct: 139 KIC 141
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 28 NNFPCSVCQKVFRWKNSLKRHTEVH 52
N F C +C K F+ +L+ H H
Sbjct: 46 NRFVCEICNKGFQRDQNLQLHRRGH 70
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.130 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,764,013
Number of Sequences: 37544
Number of extensions: 92964
Number of successful extensions: 404
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 365
Number of HSP's gapped (non-prelim): 52
length of query: 93
length of database: 14,793,348
effective HSP length: 70
effective length of query: 23
effective length of database: 12,165,268
effective search space: 279801164
effective search space used: 279801164
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 52 (25.0 bits)
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