GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001785-TA|BGIBMGA001785-PA|IPR007087|Zinc finger,
C2H2-type
         (93 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    30   0.016
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    29   0.021
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   0.45 
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   1.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    21   5.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    21   7.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    21   7.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    21   7.4  
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    21   7.4  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    21   9.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 0.016
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 32  CSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESC 66
           C VC++ F+   SL+ H   H         +C++C
Sbjct: 157 CVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNC 191



 Score = 29.1 bits (62), Expect = 0.028
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 9   PSASYQTRLL-FRSAVHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKD----TTEAA-- 61
           P AS   R L     +H  +  + C  C + FR K  LKRH   +   D    T +A   
Sbjct: 361 PYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTH 420

Query: 62  YCESCGIGFKSVCSFQRHM 80
            C +C   F+   +  RHM
Sbjct: 421 ICPTCKRPFRHKGNLIRHM 439



 Score = 27.9 bits (59), Expect = 0.064
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 23  VHELKNNFPCSVCQKVFRWKNSLKRHTEVH 52
           +H  +  + C VC   F   NSLK H  +H
Sbjct: 261 IHTGEKPYSCDVCFARFTQSNSLKAHKMIH 290



 Score = 27.5 bits (58), Expect = 0.085
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 28  NNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFKSVCSFQRHM 80
           + + C+ C         L RH + H ++D      C  C  GFK++ S Q H+
Sbjct: 125 STYMCNYCNYTSNKLFLLSRHLKTH-SEDRPHK--CVVCERGFKTLASLQNHV 174



 Score = 26.2 bits (55), Expect = 0.20
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 32  CSVCQKVFRWKNSLKRHTEVHLAKDT 57
           C  C++ FR K +L RH  +H  + T
Sbjct: 422 CPTCKRPFRHKGNLIRHMAMHDPEST 447



 Score = 25.8 bits (54), Expect = 0.26
 Identities = 11/49 (22%), Positives = 16/49 (32%)

Query: 23  VHELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAYCESCGIGFK 71
           +H       C  C   F  + S K H + H  +      YC    I  +
Sbjct: 320 LHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMR 368



 Score = 23.0 bits (47), Expect = 1.8
 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 24  HELKNNFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAAY-CESCGIGFKSVCSFQRH 79
           H  +  F C  C      K  L RH  +H    T E  Y C+ C   F    S + H
Sbjct: 234 HTGEKPFQCPHCTYASPDKFKLTRHMRIH----TGEKPYSCDVCFARFTQSNSLKAH 286


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 0.021
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 30  FPCSVCQKVFRWKNSLKRHT-EVHLAKDTTEAAYCESCGIGFKSVCSFQRHMK 81
           F C++C   +R K   ++H  EVH   +      C  C   F     +Q HM+
Sbjct: 349 FQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMR 401


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 63  CESCGI-GFKSVCSFQRHMKNSLKHVTH 89
           C+ C   G+ + C F RH+ N   H  H
Sbjct: 339 CKPCNCNGYSTKCFFDRHLYNLTGHGGH 366



 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 49  TEVHLAKDTTEAAYCESCGIGF 70
           T V   K+  E  +C  C +G+
Sbjct: 462 TGVCSCKENVEGRHCRECRLGY 483


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 6   GNLPSASYQTRLLFRSAVHELKNNFPCS 33
           G LPS   Q +L   S+ ++L N+  CS
Sbjct: 172 GELPSNKQQQQLTSASSSNQLSNSSLCS 199


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 8   LPSASYQTRLLFRSAVHELKNNFPCSVCQKVFRWKNSLK 46
           L  A  +T LL  S+      N P ++C    R K S++
Sbjct: 703 LSLAPEKTELLMISSKRSGYRNIPVNICGVEVRSKRSIR 741


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 32  CSVCQKVFRWKNSLKRHTEV 51
           C VC + F  ++++K H +V
Sbjct: 925 CPVCGQKFTRRDNMKAHCKV 944


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 17  LLFRSAVHELKNNFPCS 33
           L +   VH++   FPCS
Sbjct: 484 LQWLDCVHQIHRQFPCS 500


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 17  LLFRSAVHELKNNFPCS 33
           L +   VH++   FPCS
Sbjct: 484 LQWLDCVHQIHRQFPCS 500


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 29  NFPCSVCQKVFRWKNSLKRHTEVHLAKDTTEAA 61
           NF  SV   V RW    KR   V     T EAA
Sbjct: 177 NFDFSVYPNVHRWYEQCKREL-VGYTDITKEAA 208


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 49  TEVHLAKDTTEAAYCESCG 67
           +E H A+D +    C +CG
Sbjct: 505 SEGHKARDCSSYVKCAACG 523


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.130    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,688
Number of Sequences: 2123
Number of extensions: 3826
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 17
length of query: 93
length of database: 516,269
effective HSP length: 54
effective length of query: 39
effective length of database: 401,627
effective search space: 15663453
effective search space used: 15663453
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 41 (20.6 bits)