Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001784-TA|BGIBMGA001784-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
(531 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 38 0.003
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 33 0.099
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 32 0.23
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 31 0.40
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 31 0.53
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 29 1.2
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 29 1.2
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 29 1.6
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 29 2.1
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 29 2.1
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 2.8
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 28 2.8
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 28 3.7
SPCC1442.17c ||SPCC285.02c|DUF292 family protein|Schizosaccharom... 28 3.7
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 28 3.7
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 28 3.7
SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|ch... 28 3.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 3.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 4.9
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 27 4.9
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 4.9
SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 4.9
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 27 6.5
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 6.5
SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|c... 27 6.5
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 27 8.6
SPCC1827.08c |pof7|SPCC70.11c|F-box protein Pof7|Schizosaccharom... 27 8.6
SPAC25A8.01c ||snf2SR|fun thirty related protein Fft3|Schizosacc... 27 8.6
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 27 8.6
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 38.3 bits (85), Expect = 0.003
Identities = 40/202 (19%), Positives = 80/202 (39%), Gaps = 7/202 (3%)
Query: 189 TSGTRNRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFS 248
+S + + + +S ++ + S S+ S E D+D S S++ ++ D S
Sbjct: 164 SSSSSSSSESESSSEDNDSSSSSSDSESESSSE---DSDSSSSSSDSESESSSEGSDSSS 220
Query: 249 GSEGYIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDC 308
S + +D S ++ +SS + S + E +++SDS SD
Sbjct: 221 SSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDS- 279
Query: 309 VMDPDFSDDSGEEMGLKEKKNSDKFSGSKGDIETAFKNNKIQNMSDTGGIPLNVNIEDNA 368
+ D S DS + ++SD S S ++ + N T ++ N+
Sbjct: 280 --EDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNS 337
Query: 369 TLDLQFDCLKVEIDNGRSRDEA 390
T + +K E D+ + D++
Sbjct: 338 TSSEESTSVKDE-DSSKIHDKS 358
Score = 34.7 bits (76), Expect = 0.032
Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 15/243 (6%)
Query: 128 KDEVKNEVIQNFIGYVEREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFL----- 182
KD K +V +N + + +++ + V K K + + +K + +K S+
Sbjct: 37 KDLAKGKVKKNLLDLLSQKEFLPYLTTEDVGKHKKTKESLEKSNDDSQKISKKGAPPEKA 96
Query: 183 NEVSYATSGTRNRKDLQSVLVKDEVKNEKSGSDIRMSDE----CVIDADFSDDSTEEIGL 238
+ S A+ + + S + E +E + S SD D+D S S++
Sbjct: 97 HSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESE 156
Query: 239 KDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENS 298
++ D S S + +D S ++ +SS + S + E +E S
Sbjct: 157 SSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGS 216
Query: 299 DSDIPM----SDDCVMDPDFSDDSGEEMGLKEKKNSDKFSGSK-GDIETAFK-NNKIQNM 352
DS S+ D D S S + ++SD S S + E++ K ++ N
Sbjct: 217 DSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNS 276
Query: 353 SDT 355
SD+
Sbjct: 277 SDS 279
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 33.1 bits (72), Expect = 0.099
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 290 KDEVK-NENSDSDIPMSDDC-VMDPDFSDDSGEEMGLKEKKNSDKFSGSKGDIETAFKNN 347
K+EV N + DS + + D + + +DS E L+E SDK G K
Sbjct: 145 KNEVAINSHEDSPVCLEDITGSLSSTYGNDSLGESNLEELPTSDKIKGENMGSRKKRKGF 204
Query: 348 KIQNMSDTGGIPLNVNIEDNATLDLQFDCLKVEIDNGRSRDEAGSGI 394
I + GIP N+ L + L + D R D +
Sbjct: 205 VIDSEDSDTGIPREENVTITRKTKLSSNILYSDSDTERQSDSGSKNV 251
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.9 bits (69), Expect = 0.23
Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 15/163 (9%)
Query: 197 DLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIET 256
D + + E ++E IR + ++ D D +D+ DK G+ G +E
Sbjct: 398 DFSAYIASSESEDEDVDV-IRSRYQKLLSGDADDFQANSNPFEDD---DKLEGANGEMEV 453
Query: 257 TFE-----DDKFSECFLNEVSY------ATSSTRNRKDLQSVFVKDEVKNENSDSDIPMS 305
TF D+ + +E + A + RK+L+ + + + E SD D+
Sbjct: 454 TFTSGFDVDNNANSSEKDETTIEKYKRKAAERKQRRKELRQLKKTKDDEGEGSDVDLGFD 513
Query: 306 DDCVMDPDFSDDSGEEMGLKEKKNSDKFSGSKGDIETAFKNNK 348
D D D S ++ + K + D + SK ++E + ++
Sbjct: 514 DPFFKDKDASRNNKKNKKGKHTQIEDPTAASKEELENLVREDE 556
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 31.1 bits (67), Expect = 0.40
Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 1/160 (0%)
Query: 143 VEREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVL 202
++RE+E A + K KQ ++L+ R+K E L + + L
Sbjct: 876 IQREKEKARRLAEEEALLKEKQERERQLQEERQKMQEEVLEWRKSQQKASEDDMSLSDDE 935
Query: 203 VKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKN-CDKFSGSEGYIETTFEDD 261
K K +K R S +D +EI L D +N K + I + D
Sbjct: 936 EKQSGKKKKKDRKKRKSKSKQESSDSGVSEDDEIPLSDARNKTKKRRVNRRVISEEYTFD 995
Query: 262 KFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSD 301
+ S+ N+ + + ++D +D+ K N S+
Sbjct: 996 QDSDAEGNQEEEVSRTIEEKQDNDITDNQDDNKELNLFSE 1035
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 30.7 bits (66), Expect = 0.53
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 282 KDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMGLKEKKNSDKFSGSKGDIE 341
K+ +VF+ + +NSD SDD D D SDD + +KE K S KF + D+
Sbjct: 448 KNAVTVFLPNPESVDNSDESSETSDD---DLDDSDDDNK---VKEGKVSSKFIAVELDLS 501
Query: 342 T-AFKNNKIQNMSDTGGIPLNVNIEDNATLDLQFDCLKVEIDNGRS 386
AF N + Q + + A+ L+ K+E D RS
Sbjct: 502 LGAFANARKQYELRREALIKETKTAEAASKALKSTQRKIEQDLKRS 547
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 288 FVKDEVKN---ENSDSDIPMSDDCVMDPDFSDDSGEEMGLK 325
F+ DE K E DS ++ + P FSDDSG+E L+
Sbjct: 94 FIDDEAKECEGEEEDSVFDSDEEHEVKPMFSDDSGDEEDLE 134
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 29.5 bits (63), Expect = 1.2
Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 9/128 (7%)
Query: 182 LNEVSYATSGTRNRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLK-- 239
L V S + K L+ + E E + E +D SD STE + K
Sbjct: 262 LERVETTASLDMDYKPLEPLAPIQEAPVEDTSEPFSSVPEATLDD--SDISTESLRKKVL 319
Query: 240 DNKNCDKFSGSEGYIETTFEDDKFSECFL--NEVSYAT---SSTRNRKDLQSVFVKDEVK 294
+ S Y T + FSE L N Y S+RN + S + D ++
Sbjct: 320 AKMEAKRISSGSSYASTLRKVYDFSELSLPTNGKDYDELYLQSSRNSEPEISTIINDSLQ 379
Query: 295 NENSDSDI 302
EN D DI
Sbjct: 380 QENMDEDI 387
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 289 VKDEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMGLKEKKNSDKFSGSKGD 339
V++ + E SD+D P ++ ++S+D+ EE G E + D+ SG D
Sbjct: 944 VEEVSEYEASDAD-PSDEEEEESEEYSEDASEEDGYSESEVEDEESGEDWD 993
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 28.7 bits (61), Expect = 2.1
Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Query: 228 FSDDSTEEIGLKDNKNCDKFSGSEGYI-ETTFEDDKFSECFL-NEVSYATSSTRNRKDLQ 285
F ST ++ DNKN S + +F DD L NE++ + +
Sbjct: 930 FIPPSTPDLSFTDNKNSLSPSNILSLDGKFSFNDDSELWADLGNEINSEIGFLKEPDTMN 989
Query: 286 SVFV--KDEVKNENSDSDIPMSDDCVMDPDFSD-DSGEEMGLKEKK 328
KD+ K +N + I + C +DP D D EM L EKK
Sbjct: 990 LALDADKDKTKMQNKLTQINFDESCFLDPAIDDKDPWNEM-LHEKK 1034
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 150 ALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQS 200
+L SV KRKS +TR ++ S + + Y+TS +RK +S
Sbjct: 1263 SLTQTGSVPKRKSTSYTRPSKSYRHKRGSTSYSRKRKYSTSQKDSRKTSKS 1313
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 274 ATSSTRNRKDLQSVFVKDEVKNENSDSD 301
AT++T+ K +S V+D+V + +SDSD
Sbjct: 574 ATTTTKKPKAAKSTAVRDDVSSASSDSD 601
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.3 bits (60), Expect = 2.8
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 205 DEVKNEKSGSDIRMSDECVI-DADFSDDST---EEIGLKDNKN-CDKFSGSEGYIETTFE 259
+E K ++ +R+ E DA+ ++ ST E LKD+ + D S + T
Sbjct: 406 EEKKKKEREEQVRLLQESADKDAEMNEASTATSENEDLKDDLSLADLSSKKTANSQATEN 465
Query: 260 DDKFSECFLNEVSYATS---STRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSD 316
++ S+ + S S S ++R L S KD KN+N+D+ + S D + S
Sbjct: 466 NNTPSKAKVKAESKVRSKAKSDKSRAKLSSDTNKDSEKNDNNDASL-QSAGVASDGESSP 524
Query: 317 DSGEEMGLKEKK 328
++ K KK
Sbjct: 525 ETPLTKASKSKK 536
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 27.9 bits (59), Expect = 3.7
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 191 GTRNRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGS 250
G + +++L+K V ++S I D + D+ T+ + N FS +
Sbjct: 1821 GIKRETSFKNILLK-AVHEKRSPLAISYLDAANMYRSNEDEGTKMMFSNTLNNAGFFSLN 1879
Query: 251 EGYIETTFEDDKFSECFLNEVSYATSSTRNRKDL 284
E YI++ +D EC NEV YA++ + D+
Sbjct: 1880 EFYIDSLKANDAIDEC-SNEV-YASAWRMQKWDI 1911
>SPCC1442.17c ||SPCC285.02c|DUF292 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 271
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 281 RKDL-QSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMGLKEKKNSDKFSGSKGD 339
RK+L ++ F D K N D D +++ + S++ + LKE+ + G+
Sbjct: 157 RKELIRTYFPNDYPKEANKDIPSSAEADTMLNLESSENREQPTSLKEENTQEDDEKVNGN 216
Query: 340 IETAFKNNKIQNMSDTGGIPL 360
+ K + QN T L
Sbjct: 217 LANISKRAEPQNNGSTNASSL 237
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 271 VSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMD-PDFSDDSGEEMGLKEK 327
++ S + K++ S K +VK + D + S+D V D PD +DDS + K+K
Sbjct: 8 ITQEDSIEKKSKNVASHGEKRKVKRKKEDLSMDGSNDGVKDSPDSNDDSQSKKKKKKK 65
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 27.9 bits (59), Expect = 3.7
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 253 YIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDP 312
Y+ TF +D+ E +E +A +RK+ + +DE ++ DS SD +
Sbjct: 366 YVMETFHEDEELEDSEDE-EFARQQLLSRKEEEEE--EDEEASDFEDSFADFSDG---EA 419
Query: 313 DFSDDSGEEMGLKEKKNSDKFSGSKGDIETAFKNNKI 349
D D+S ++ NS G K D +NNKI
Sbjct: 420 DDLDESRWRKEAAKEHNSLLAVGYKNDRSYVVRNNKI 456
>SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 388
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 230 DDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSY-ATSSTRNRKDLQSVF 288
DD EI L + N + + + G+++ DD+F E L EV + R ++ Q+++
Sbjct: 248 DDEMLEIPLGKHNNTNLPALTAGFLDPVESDDEFVEKELEEVDIPKRKNRRGQRARQAIW 307
Query: 289 VKDEVKNEN 297
K K N
Sbjct: 308 EKKYGKGAN 316
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.9 bits (59), Expect = 3.7
Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 12/147 (8%)
Query: 198 LQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETT 257
LQ +L+ +V NE ++ S + + +SDD T LK+ K + + IE
Sbjct: 609 LQRILLNSKVSNESFEDSLQASLNMLTERFYSDD-TARNALKEAK-ASRAMAEKMVIE-- 664
Query: 258 FEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDD 317
D ++ L + +D + V + + NE ++I D + +
Sbjct: 665 -RDAMAAQVNLGAEDLIAKLNKEVEDQKDVILSQKRTNETLKTEI----DALQKSHVTQI 719
Query: 318 SGEEMGLKEKK---NSDKFSGSKGDIE 341
E+ L+E NSD F GS E
Sbjct: 720 QRSEVELRELYLLINSDSFQGSTNSKE 746
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 4.9
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 218 MSDECVIDADFSDDSTEEIGLKDNK-NCDKFSGSEGYIETTFEDDKFSECFLN--EVSYA 274
+ + +D D D ++ D K N D F + E + ED S+ L EV
Sbjct: 4135 LEENNTLDEDIQQDDFSDLAEDDEKMNEDGFEENVQENEESTEDGVKSDEELEQGEVPED 4194
Query: 275 TSSTRNRK-DLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSG 319
+ + K D +S F E EN+D I ++ + + D + +SG
Sbjct: 4195 QAIDNHPKMDAKSTFASAEADEENTDKGIVGENEELGEEDGAAESG 4240
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 282 KDLQSV--FVKDEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMGLKEKKNSDKFSGSK 337
+DLQ++ KD++K+ + D + D + + ++D +E+G K+ ++ S K
Sbjct: 4321 EDLQALGNAEKDQIKSIDRDESANQNPDSMNSTNIAEDEADEVGDKQLQDGQDISDIK 4378
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 223 VIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSYATSSTRNRK 282
VI AD DD +++ D I++T D + + +SS + +
Sbjct: 173 VIPADEDDDEYQDLPAAKRHEGDS-------IKSTEHDSTLDSGVVIDGREKSSSELHEE 225
Query: 283 DLQSVFVKDEVKNENSDSDIPMSDD 307
+ + D KN +D+ P+SDD
Sbjct: 226 ESEQAAEGDTAKNSGTDAQAPLSDD 250
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 253 YIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDI 302
++++ DD+ + FL +V+ ATS D SV K + +N NSDSDI
Sbjct: 344 FMDSENVDDEEDDDFL-DVTTATSLQNKSTDYGSV--KRKTENLNSDSDI 390
>SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 455 EQMLDERNAAHGSESFQSSAYKCETCILGFQYRRPYEAHLNSRHAKVYAF 504
E + D+RN + S+S ++ + G Q PY + LNS + + F
Sbjct: 136 EDIDDDRNKSAVSKSLVRHPHRLKMLPFGIQSAHPYISSLNSNYPTTWHF 185
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 330 SDKFSGSKGDIETAFKNNKIQNMSDTGGIPLNVNIEDNATLDLQF 374
S ++G T F ++K + + PLN IEDN +L++
Sbjct: 383 SSSIPNNQGQYPTDFLSSKDMSFPENDDSPLNSKIEDNLIDNLKY 427
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 475 YKCETCILGFQYRRPYEAHLNSRHAKVYAFNISEVD 510
Y CETC F + H+ S H F SE+D
Sbjct: 70 YVCETCTRAFARLEHLKRHIRS-HTNEKPFTCSEID 104
>SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 234 EEIGLKDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEV 293
EE G D + DK + GY + D++ SE +++ T S + +D+ +DE
Sbjct: 104 EESG-HDEEEADKDASFTGYYNSRNNDEEGSELADSQMLPMTESFADIEDIHHHQHEDEF 162
Query: 294 KNENSD 299
+ N D
Sbjct: 163 SSSNKD 168
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 26.6 bits (56), Expect = 8.6
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 243 NCDKFSGSEGYIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDI 302
N +F G + +T +D KF E + + + K+ S FVK KN +S+S+
Sbjct: 482 NIRRFQGRDLSF-STLKDMKFEETSFLPSHDSQRNRSSLKERDSSFVK---KNLDSESNQ 537
Query: 303 PMSDDCV 309
+ DDCV
Sbjct: 538 LIFDDCV 544
>SPCC1827.08c |pof7|SPCC70.11c|F-box protein
Pof7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 361
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 142 YVEREQEDALVNVRSVSK----RKSKQWTRKKLKRNREKFSECFLNEVSYATSGT 192
Y EQ++ +++S+ + + + W LK+ R +F C+++ Y GT
Sbjct: 162 YCSCEQKEWQQSIKSIEEELVEKYQQSWKTLFLKKPRSRFDGCYISVCRYFRPGT 216
>SPAC25A8.01c ||snf2SR|fun thirty related protein
Fft3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 922
Score = 26.6 bits (56), Expect = 8.6
Identities = 18/96 (18%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 246 KFSGSEGYIETTFEDDKFSECF---LNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDI 302
+FS +E + + +D++ S+ L+ S ++ T + + +++ N + +
Sbjct: 134 QFSETEPKMPSYMDDEEASDSLPLSLSSQSLSSQVTNQKPAPHRLTMRERYAANNLTNGL 193
Query: 303 ----PMSDDCVMDPDFSDDSGEEMGLKEKKNSDKFS 334
P+S +P+ DDS ++M + N+D+++
Sbjct: 194 QFTLPLSSRKTYEPEADDDSNDDMYSDDDSNADRWA 229
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 206 EVKNEKSGSDIRMS-DECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIET 256
+V+N ++ D ++ D ++ D S D+ EE+ +D K +K +IE+
Sbjct: 87 KVENSENDLDEKLVLDGQHVEGDHSSDTEEEVVSEDQKQLNKTDDESTFIES 138
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,387,507
Number of Sequences: 5004
Number of extensions: 105369
Number of successful extensions: 298
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 263
Number of HSP's gapped (non-prelim): 43
length of query: 531
length of database: 2,362,478
effective HSP length: 76
effective length of query: 455
effective length of database: 1,982,174
effective search space: 901889170
effective search space used: 901889170
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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