GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001784-TA|BGIBMGA001784-PA|IPR007087|Zinc finger,
C2H2-type, IPR012934|Zinc finger, AD-type
         (531 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical p...    39   0.010
AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical ...    36   0.054
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    34   0.29 
AF000299-1|AAC47980.1|  210|Caenorhabditis elegans Hypothetical ...    34   0.29 
U88172-8|AAB42258.1|  312|Caenorhabditis elegans Hypothetical pr...    33   0.50 
U53342-6|AAA96218.1|  466|Caenorhabditis elegans Hypothetical pr...    33   0.66 
AC024838-6|AAF60823.1|  214|Caenorhabditis elegans Hypothetical ...    32   0.87 
Z81587-11|CAH10780.1|  483|Caenorhabditis elegans Hypothetical p...    32   1.2  
Z81587-10|CAB04708.2|  511|Caenorhabditis elegans Hypothetical p...    32   1.2  
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr...    32   1.2  
Z93385-5|CAB07640.1|  806|Caenorhabditis elegans Hypothetical pr...    31   2.0  
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    31   2.0  
X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomera...    31   2.0  
Z78544-5|CAB01759.2|  324|Caenorhabditis elegans Hypothetical pr...    31   2.7  
U53340-1|AAA96206.1|  658|Caenorhabditis elegans Hypothetical pr...    31   2.7  
AY398504-1|AAQ96213.1|  324|Caenorhabditis elegans SEL-7 protein.      31   2.7  
AL031265-2|CAE48506.1|  324|Caenorhabditis elegans Hypothetical ...    31   2.7  
Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical pr...    30   3.5  
Z99281-55|CAB16519.2|  677|Caenorhabditis elegans Hypothetical p...    30   4.7  
Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical pr...    30   4.7  
AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical...    30   4.7  
Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical pr...    29   6.2  
U41010-5|AAV28334.1|  975|Caenorhabditis elegans Hypothetical pr...    29   6.2  
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical...    29   6.2  
Z73427-4|CAA97802.2|  632|Caenorhabditis elegans Hypothetical pr...    29   8.1  
U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical pr...    29   8.1  
U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical pr...    29   8.1  
U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plu...    29   8.1  
AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   8.1  
AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   8.1  
AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical...    29   8.1  

>U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical
           protein C33G8.2 protein.
          Length = 390

 Score = 38.7 bits (86), Expect = 0.010
 Identities = 46/199 (23%), Positives = 69/199 (34%), Gaps = 7/199 (3%)

Query: 156 SVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVLVKDEVKNEKSGSD 215
           S  K+K KQ   KK +   +K  E    E        +  +D +    KD+ K ++   D
Sbjct: 116 SEDKKKRKQMRDKKKQEEEDKKKE--EEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKNDD 173

Query: 216 IRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSYAT 275
               D+        DD+ EE   KD K  DK    +   +   E+DK  +    +     
Sbjct: 174 DDEEDKKKDKKKKKDDNDEEEKEKDKKKKDKKKDDD---DDEDENDKKKD--KKKKKDDK 228

Query: 276 SSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMGLKEKKNSDKFSG 335
               N  D +    K +   E  D D    D    D   +DD  E+    +KK  D    
Sbjct: 229 DDDENEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDD 288

Query: 336 SKGDIETAFKNNKIQNMSD 354
              D +   K  K  +  D
Sbjct: 289 EDEDNKKKDKKKKKDDKDD 307



 Score = 35.9 bits (79), Expect = 0.071
 Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 10/209 (4%)

Query: 144 EREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVLV 203
           ++++E+   + +   K+K +    ++ K  ++K  +   N+        +++K  +    
Sbjct: 135 DKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEK---NDDDDEEDKKKDKKKKKDDND 191

Query: 204 KDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKF 263
           ++E + +K   D +  D+   D D +D   ++   KD+K+ D+    +   +   +DDK 
Sbjct: 192 EEEKEKDKKKKDKKKDDDD--DEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKE 249

Query: 264 SECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMD----PDFSDDSG 319
            +    E        + + D      K + K +  D D    D+   D     D  DD  
Sbjct: 250 KDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDED 309

Query: 320 EEMGLKEKKNSDKFSGSKGDIETAFKNNK 348
           EE   K+KK  DK      D +   K +K
Sbjct: 310 EEKE-KDKKKKDKKKDDDDDDDEKEKKDK 337



 Score = 30.3 bits (65), Expect = 3.5
 Identities = 37/146 (25%), Positives = 51/146 (34%), Gaps = 10/146 (6%)

Query: 194 NRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGY 253
           N  D +    K +   EK   D    D+   D   +DD  EE   KD K        E  
Sbjct: 233 NEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDD-EEDKKKDKKKKKDDDDDED- 290

Query: 254 IETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPD 313
                ED+K  +    +           KD +    KD+ K+++ D D     D     D
Sbjct: 291 -----EDNKKKDKKKKKDDKDDEDEEKEKDKKK---KDKKKDDDDDDDEKEKKDKKKKDD 342

Query: 314 FSDDSGEEMGLKEKKNSDKFSGSKGD 339
             DD  E+   K+KK  D     K D
Sbjct: 343 KDDDEDEDKDDKKKKKDDVDDDMKKD 368


>AF047663-6|AAC04447.1|  368|Caenorhabditis elegans Hypothetical
           protein W09G12.7 protein.
          Length = 368

 Score = 36.3 bits (80), Expect = 0.054
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 7/154 (4%)

Query: 190 SGTRNRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSG 249
           S ++ +KD ++   +D+V+N K       SD+ V+      D   + G K  K   K   
Sbjct: 20  SESKKKKDKKTFEEEDDVENVKR-KPAESSDDEVVVVVVKKDQKGKRGKKSKKPKKKQES 78

Query: 250 SEGYIETT-----FEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPM 304
           S+   + +      +DDK S+    +    +S + +  D  S    D  K +   S    
Sbjct: 79  SDDSSDNSDSSESSDDDKKSKKKKKKSKKDSSDSSDSSD-SSDSSDDGKKKKKKKSKKDS 137

Query: 305 SDDCVMDPDFSDDSGEEMGLKEKKNSDKFSGSKG 338
           SDD     D SD S      K+KK   K S +KG
Sbjct: 138 SDDSSDSSDSSDSSDSSDDDKKKKKKSKKSKNKG 171


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
            protein F55F10.1 protein.
          Length = 4368

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 4/146 (2%)

Query: 205  DEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFS 264
            DE ++E  G +    DE  I+ D  +D  E+   ++++  +  + +    E + E  K  
Sbjct: 3815 DEAEDEDDGDETDKEDEEAIEGDGEEDQNED---QNDQELEDPTQTNEENEDSEEQKKED 3871

Query: 265  ECFLNEVSYATSSTRNRKDL-QSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMG 323
            E          +   + KD+      ++E K +  D D         DP+     GE   
Sbjct: 3872 EALEQGTGGEKNDQDDNKDVADGGLAEEEEKEDQEDQDEKGEGKSKSDPNGDGSKGEAPK 3931

Query: 324  LKEKKNSDKFSGSKGDIETAFKNNKI 349
             K +K  +     K D E   +  ++
Sbjct: 3932 EKAEKEEEDEEKEKDDEEKVERKREL 3957


>AF000299-1|AAC47980.1|  210|Caenorhabditis elegans Hypothetical
           protein E03H12.5 protein.
          Length = 210

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 2/129 (1%)

Query: 204 KDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKF 263
           KD  K E+   D    D    + D  D+  +E    + K+ D+    E   +   +D+K 
Sbjct: 82  KDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDK--KDEKK 139

Query: 264 SECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMG 323
            E    +   +  S ++ K  +S   K E K+E+   D    DD   D    D   +E  
Sbjct: 140 DEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDEDKKEDDKKEDDKKDDKKEDDKKDDEKK 199

Query: 324 LKEKKNSDK 332
             +KK+ +K
Sbjct: 200 DDDKKDDEK 208


>U88172-8|AAB42258.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK354.3 protein.
          Length = 312

 Score = 33.1 bits (72), Expect = 0.50
 Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 5/174 (2%)

Query: 159 KRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVLVKDEVKNEKSGSDIRM 218
           K+K+++   KK K+  EK  +  + +     S  +++KD +    K E   EKS  + + 
Sbjct: 90  KKKTEEKDDKKSKKTEEK-DKLSVKKTQETKSERKDKKDERKEDDKKEENKEKSKDEEKK 148

Query: 219 SDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSYATSST 278
            DE     +      ++ G K+ K  ++F       E   +++K  E   N+       T
Sbjct: 149 KDEVKDKKEDEKMDDKKPGEKEEKK-EEFKKEMKKEEK--KEEKKEEPKKNDAPKKEGET 205

Query: 279 RNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMGLKEKKNSDK 332
           +     +   V++ +  E SD D    +      D   D  +E   +EKK   K
Sbjct: 206 KGEVK-KDALVENPIVTEMSDRDEKKEEKKDDKKDEKKDEKKEAKKEEKKEEKK 258


>U53342-6|AAA96218.1|  466|Caenorhabditis elegans Hypothetical
           protein F01G12.6 protein.
          Length = 466

 Score = 32.7 bits (71), Expect = 0.66
 Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 8/162 (4%)

Query: 145 REQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVLVK 204
           RE  + LV  R   + + K   ++KL     +F+E  +N+    +   +  +DLQS + +
Sbjct: 311 REDSEVLVKKRKELEDQLKD-EKEKLDNKESEFNEGRINDRLKYSEAMQTIQDLQSSISQ 369

Query: 205 DEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFS 264
            E+K  +  +  ++    V D D   +S   I      N D  S +   +     D    
Sbjct: 370 LELKKAEKWTQNQLRGSSVCDLDEESNSHGSI----CSNVDHLSLASDEMNALLADMTVR 425

Query: 265 ECFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSD 306
              L++++   S+T    +L+   + D   N+ +DS + +SD
Sbjct: 426 IPTLDDLAEEGSATET-DELRPKELND--GNDTTDSGVQLSD 464


>AC024838-6|AAF60823.1|  214|Caenorhabditis elegans Hypothetical
           protein Y59E9AL.6 protein.
          Length = 214

 Score = 32.3 bits (70), Expect = 0.87
 Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 12/127 (9%)

Query: 204 KDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKF 263
           KDE K+E+        DE   D D  D+   +   KD K  DK    E   +   ED+K 
Sbjct: 96  KDEKKDEEKKDGDDKKDEKK-DDDKKDEKKSD--KKDEKKDDKKEKDEEKKDDKKEDEKK 152

Query: 264 SECFLNEVSYATS----STRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSG 319
            +   ++   A S    S +++K  +S   K E K++  D D    DD   D D  DD  
Sbjct: 153 DDDKKDDKKEAKSKSKKSNKSKKSKKS---KREKKDDKKDED--KKDDDKKDDDKKDDEK 207

Query: 320 EEMGLKE 326
           ++   KE
Sbjct: 208 KDNEKKE 214


>Z81587-11|CAH10780.1|  483|Caenorhabditis elegans Hypothetical
           protein T06G6.3b protein.
          Length = 483

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 26/158 (16%), Positives = 66/158 (41%), Gaps = 8/158 (5%)

Query: 84  KENLNEYLLTE-----VSRPPRLKITKNEIIAISPHVDCSRRPNVRVDFKDEVKNEVIQN 138
           K N+N + L E     + +  R+K+ +NEI  ++  +D  + P  ++++ D ++ +   +
Sbjct: 180 KRNVNHFKLDETCPIQIIKSERIKVAQNEIRELNKQLDAEQDPLKKLEYMDSIREKA--S 237

Query: 139 FIGYVEREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDL 198
            I     +  + L +V    +    +   ++L++ +++  E  + E        +N    
Sbjct: 238 LIAQEAMDHAELLNSVLDYERDAHTEIRHRQLRKQKKEI-EKLIGEWKVKEKEHQNDMCK 296

Query: 199 QSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEI 236
            +  + D+    K+ +  R  +           S +EI
Sbjct: 297 LAQQILDQALEFKASNKARAKEHPASSKSEEQSSNKEI 334


>Z81587-10|CAB04708.2|  511|Caenorhabditis elegans Hypothetical
           protein T06G6.3a protein.
          Length = 511

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 26/158 (16%), Positives = 66/158 (41%), Gaps = 8/158 (5%)

Query: 84  KENLNEYLLTE-----VSRPPRLKITKNEIIAISPHVDCSRRPNVRVDFKDEVKNEVIQN 138
           K N+N + L E     + +  R+K+ +NEI  ++  +D  + P  ++++ D ++ +   +
Sbjct: 208 KRNVNHFKLDETCPIQIIKSERIKVAQNEIRELNKQLDAEQDPLKKLEYMDSIREKA--S 265

Query: 139 FIGYVEREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDL 198
            I     +  + L +V    +    +   ++L++ +++  E  + E        +N    
Sbjct: 266 LIAQEAMDHAELLNSVLDYERDAHTEIRHRQLRKQKKEI-EKLIGEWKVKEKEHQNDMCK 324

Query: 199 QSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEI 236
            +  + D+    K+ +  R  +           S +EI
Sbjct: 325 LAQQILDQALEFKASNKARAKEHPASSKSEEQSSNKEI 362


>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical protein
            C09F9.2 protein.
          Length = 1642

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 10/164 (6%)

Query: 81   TYTKENLNEY-LLTEVSRPPRLKITKNEIIAISPHVDCSRRPNVRVDFKDEVKNEVIQN- 138
            T TK+ ++     T+V  PP    TK+      P V   RR  +RV   +   NE + + 
Sbjct: 1306 TSTKKTISSSGTTTKVLMPPMH--TKHSYTVYEPEVSAKRRYGLRVRILNREFNEALNDP 1363

Query: 139  FIGYVEREQEDALVNVRSVSKRKSKQWTRKKLKR--NREKFSECFLNEVSYATSGTRNRK 196
              GY +   ++     +S+ +  +K+W   ++ +    EK S     EV  A   T    
Sbjct: 1364 KTGYYQDFTKEV---TQSIDELLAKRWKGMRVSKIVGYEKGSVIAEFEV-VAMEDTAKPM 1419

Query: 197  DLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKD 240
            +L+S++ ++ V+ +     I  S   V + D +   + E  L D
Sbjct: 1420 ELKSMVEENAVRGQIGAFSIEPSTVKVTEVDTTTAPSNEETLTD 1463


>Z93385-5|CAB07640.1|  806|Caenorhabditis elegans Hypothetical
           protein M01E5.5a protein.
          Length = 806

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 18/210 (8%)

Query: 129 DEVKNEVIQNFIGYVEREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYA 188
           DE+K EV        E    D+ V    + KR  K+  +KK K       + +  E   +
Sbjct: 24  DEIKKEVKD------EPMASDSEVPFGELMKRDKKEKKQKKRKAESGSDEDDYKPEKRKS 77

Query: 189 TSGTRNRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFS 248
           ++    +KD+ S   +D+ K EK  S  + +++        DD  E  G    ++     
Sbjct: 78  SAKNGKKKDVGSDS-EDDYKPEKKKS--KKNNKKKAQESSEDDDEESEGDVSEEDVKPQI 134

Query: 249 GSEGYIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKN-ENSDSDIPMSDD 307
            S+  +E   E+D+       E        R +K+ +    + E K  E  +  I   DD
Sbjct: 135 HSDDELE---EEDEAPTTDDEEEQKRKEKERRKKEKREKKERKEKKRLEKENRKIKEEDD 191

Query: 308 CVMDPDFSDDSGEEMGLKEKKNSDKFSGSK 337
                + SDD  +E   K+K+ S     SK
Sbjct: 192 -----EDSDDEDDEKAKKKKRKSKGAEKSK 216


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 4/148 (2%)

Query: 159 KRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVLVKDEVKNEKSGSDIRM 218
           KRK  +  +K+ K  +EK  E   +E    T     +K+ +    KDE  N K    +  
Sbjct: 793 KRKKHKKHKKEKKSKKEKRDE---DEDDLDTEKKEKKKERKYQDDKDEDSNRKEPRSLDD 849

Query: 219 SDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSYATSST 278
            D+  +D +F+D   ++ G  +    D F   +  +     D +  +   ++        
Sbjct: 850 EDKVELDKNFADKKEKKKGKWNEDEEDIFEDRKEELPKE-SDRRDRKDRRHDDEDDRKER 908

Query: 279 RNRKDLQSVFVKDEVKNENSDSDIPMSD 306
           R+ +D Q +  +D  K    D +    D
Sbjct: 909 RHERDSQKIDEQDRKKERKRDRETEAYD 936


>X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomerase
           protein.
          Length = 806

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 18/210 (8%)

Query: 129 DEVKNEVIQNFIGYVEREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYA 188
           DE+K EV        E    D+ V    + KR  K+  +KK K       + +  E   +
Sbjct: 24  DEIKKEVKD------EPMASDSEVPFGELMKRDKKEKKQKKRKAESGSDEDDYKPEKRKS 77

Query: 189 TSGTRNRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFS 248
           ++    +KD+ S   +D+ K EK  S  + +++        DD  E  G    ++     
Sbjct: 78  SAKNGKKKDVGSDS-EDDYKPEKKKS--KKNNKKKAQESSEDDDEESEGDVSEEDVKPQI 134

Query: 249 GSEGYIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVKN-ENSDSDIPMSDD 307
            S+  +E   E+D+       E        R +K+ +    + E K  E  +  I   DD
Sbjct: 135 HSDDELE---EEDEAPTTDDEEEQKRKEKERRKKEKREKKKRKEKKRLEKENRKIKEEDD 191

Query: 308 CVMDPDFSDDSGEEMGLKEKKNSDKFSGSK 337
                + SDD  +E   K+K+ S     SK
Sbjct: 192 -----EDSDDEDDEKAKKKKRKSKGAEKSK 216


>Z78544-5|CAB01759.2|  324|Caenorhabditis elegans Hypothetical
           protein K04G11.2 protein.
          Length = 324

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 15/47 (31%), Positives = 26/47 (55%)

Query: 272 SYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDS 318
           S+  S+T +  D  S  +K E+K E+SD D+ M  +   +  F ++S
Sbjct: 80  SFTPSATNSTSDKTSSSLKTELKTEDSDGDLDMEGEEDTEELFDNES 126


>U53340-1|AAA96206.1|  658|Caenorhabditis elegans Hypothetical
           protein F02E8.4 protein.
          Length = 658

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 21/98 (21%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 224 IDADFSDDSTEEIGL--KDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSYATSSTRNR 281
           IDA   ++ + + G   +D  NC+     +  IETTF+      C      +   ST N 
Sbjct: 287 IDARIINNHSVDFGCLERDRLNCELLEEQKAKIETTFDSSIDDYC----ADFVIDSTTNG 342

Query: 282 KDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSG 319
            +++++ + +E  N+     I  +   ++D +++ ++G
Sbjct: 343 MNMEALAI-EEHNNQKEHQWIATNQQSILD-EYTHETG 378


>AY398504-1|AAQ96213.1|  324|Caenorhabditis elegans SEL-7 protein.
          Length = 324

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 15/47 (31%), Positives = 26/47 (55%)

Query: 272 SYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDS 318
           S+  S+T +  D  S  +K E+K E+SD D+ M  +   +  F ++S
Sbjct: 80  SFTPSATNSTSDKTSSSLKTELKTEDSDGDLDMEGEEDTEELFDNES 126


>AL031265-2|CAE48506.1|  324|Caenorhabditis elegans Hypothetical
           protein K04G11.2 protein.
          Length = 324

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 15/47 (31%), Positives = 26/47 (55%)

Query: 272 SYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDS 318
           S+  S+T +  D  S  +K E+K E+SD D+ M  +   +  F ++S
Sbjct: 80  SFTPSATNSTSDKTSSSLKTELKTEDSDGDLDMEGEEDTEELFDNES 126


>Z81089-1|CAB03135.2|  957|Caenorhabditis elegans Hypothetical
           protein F53H4.1 protein.
          Length = 957

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 144 EREQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVLV 203
           E ++ED   N   V        +RKK +R+         +   +  S   +  +   VL 
Sbjct: 58  ELDEEDFCENDADVLAEPISSKSRKKSRRS---------DSSEFVPSEESDDDEEYEVLE 108

Query: 204 KDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKF 247
           K   K  KSGS  R S +  I++D ++D  +  GL D+ +   F
Sbjct: 109 KSRKKGRKSGSSSRSSSDDFIESDDNED-YKSAGLLDDNDSKNF 151


>Z99281-55|CAB16519.2|  677|Caenorhabditis elegans Hypothetical
           protein Y57G11C.18 protein.
          Length = 677

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 42/204 (20%), Positives = 83/204 (40%), Gaps = 18/204 (8%)

Query: 178 SECFLNEVSYATSGTRNRKDLQSVLVKDEVKNEKSGSDIRMSDECVIDADFSDDSTEEIG 237
           +E   ++V+Y   G  + K  ++V +K+E ++E    D  M  E + + +  + +  E+ 
Sbjct: 450 NEQLFDDVTYHNDGINHLKPRKNVYIKEEPEDE----DYHMEYEKIPEINM-EQNVNELF 504

Query: 238 LKDNKNC-DKFSGSEGYIETTFEDDKFSECFLNEVSYATSSTRNRKDLQSVFVKDEVK-- 294
           ++  K+   K   S+   +         +     V YATS+ R + DL+     + VK  
Sbjct: 505 MEPQKHAPGKIKKSKKQKKDGTLSRPLGKKEKKSVQYATSNKRQKFDLKRGKSMNNVKPR 564

Query: 295 -------NENSDSDIPMSDDCVMDPDFSDDSG--EEMGLKEKKNSDKFSGSKGDIETAFK 345
                  +E  + + PM D+   + + S      ++   K      KF   +    +  +
Sbjct: 565 KLYKLQLDEEDEDEEPMVDETPQNTEISIKKRPFQQDSTKNLNKRQKFDLKRRKNMSRVR 624

Query: 346 NNKIQNMSDTGGIPLNVNIEDNAT 369
            NKI  M +     ++  I DN T
Sbjct: 625 PNKIYKMQNLKR-NISSTIPDNGT 647


>Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 214 SDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSY 273
           S+ R S +     DF+  ST++ G+  + +      +     T F +   S  + N +  
Sbjct: 12  SECRRSSDYAQLCDFAS-STDKNGIHLDVHSKIEDDAVSVAGTVFNEPWDSNVWENLLDL 70

Query: 274 ATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDD--CVMDPDFSDDSGEE 321
           A     +   L+   V + ++ E+SDSD     D  C MD D  DD  +E
Sbjct: 71  AHHGDESTMGLK---VSEPIQEEDSDSDRTAGGDSTCQMDSDEDDDDDDE 117


>AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 214 SDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFSECFLNEVSY 273
           S+ R S +     DF+  ST++ G+  + +      +     T F +   S  + N +  
Sbjct: 12  SECRRSSDYAQLCDFAS-STDKNGIHLDVHSKIEDDAVSVAGTVFNEPWDSNVWENLLDL 70

Query: 274 ATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDD--CVMDPDFSDDSGEE 321
           A     +   L+   V + ++ E+SDSD     D  C MD D  DD  +E
Sbjct: 71  AHHGDESTMGLK---VSEPIQEEDSDSDRTAGGDSTCQMDSDEDDDDDDE 117


>Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical
           protein R07E3.6 protein.
          Length = 927

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 7/164 (4%)

Query: 206 EVKNEKSGSDIRMSDECVIDADFSDDSTEEIGLKDNKNCDKFSGSEGYIETTFEDDKFSE 265
           E ++ + G D + + E V   DF+ D        D K          ++ TT E+   +E
Sbjct: 176 EPESAEDGIDKKKTAEKV---DFTTDDNNVSQEADAKPDSTHENGGEHVSTTPEES-ITE 231

Query: 266 CFLNEVSYATSSTRNRKDLQSVFVKDEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMGLK 325
               EV  +T+ST++ K    +  +DE + E+  SD    +         +   +E  L 
Sbjct: 232 NTTAEVPASTASTKDTKLSVKIRSEDEKREEDKLSD---DEKPNYMKKLEEIYKKEEELV 288

Query: 326 EKKNSDKFSGSKGDIETAFKNNKIQNMSDTGGIPLNVNIEDNAT 369
           E++ ++       + E   K  K+   S T  IP     E+  T
Sbjct: 289 ERELAEMSVAEIFEKEVVIKTTKVTPTSTTTEIPTTTTTEEATT 332


>U41010-5|AAV28334.1|  975|Caenorhabditis elegans Hypothetical
           protein T05A12.4b protein.
          Length = 975

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 5/38 (13%)

Query: 292 EVKNENSDSDIPMSDDCVMDPDFSDD-SGEEMGLKEKK 328
           E+KN++S  D P    C+++ D  DD  GE+ G  EKK
Sbjct: 784 EIKNDSSRDDSP----CLLEEDEDDDFDGEDDGSAEKK 817


>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
           protein T05A12.4a protein.
          Length = 1622

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 5/38 (13%)

Query: 292 EVKNENSDSDIPMSDDCVMDPDFSDD-SGEEMGLKEKK 328
           E+KN++S  D P    C+++ D  DD  GE+ G  EKK
Sbjct: 784 EIKNDSSRDDSP----CLLEEDEDDDFDGEDDGSAEKK 817


>AC025726-23|AAK73934.1|  763|Caenorhabditis elegans Hypothetical
           protein Y71G12B.8 protein.
          Length = 763

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 20/146 (13%)

Query: 146 EQEDALVNVRSVSKRKSKQWTRKKLKRNREKFSECFLNEVSYATSGTRNRKDLQSVLVK- 204
           E +D  V   +V+ RK     +KK+    E+F++ F+ E        R  +DLQ  L K 
Sbjct: 5   ESDDEQVQDEAVTVRK-----KKKMANAAEEFAQDFIFESGDTQFIDRETEDLQKYLKKQ 59

Query: 205 -----DEV-----KNEKSGSDIRMSDEC----VIDADFSDDSTEEIGLKDNKNCDKFSGS 250
                DE      K + +G  + + DE       + D  +D  +++G K+ ++  +    
Sbjct: 60  TPTSLDEKIAEMRKLKNTGKAVIVEDEAEAAEAEEKDEEEDDVQQLGGKETRDTVREKRK 119

Query: 251 EGYIETTFEDDKFSECFLNEVSYATS 276
            G  + + E++ F    ++  S  TS
Sbjct: 120 SGKSKKSQENEDFFSALIDGKSLDTS 145


>Z73427-4|CAA97802.2|  632|Caenorhabditis elegans Hypothetical
           protein F58B3.4 protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 19/176 (10%)

Query: 194 NRKDLQSVLVKDEVKNEKS----GSDIRMSDECVIDADFSDDSTEEIGLKD--NKNCDKF 247
           NRK L ++L  DE K++      G +   SD    +    DD  EEIG+K    K  D  
Sbjct: 444 NRKTLMALLNTDERKSKLDVDWEGEEKNGSDSSDGEYVKVDDDDEEIGVKQKKKKGSDDD 503

Query: 248 SGSEGYIETTFEDDKFS-----------ECFLNEVSYATSSTRNRKDLQSVFVKDEVKNE 296
              +  +E   ED K +           +   N++    +S     ++++V   D +  +
Sbjct: 504 EDEKEEVEEKKEDVKLTGYKAYKKKQKQKLMENKLKRKGTSKEAETNIKTVAAADSISKD 563

Query: 297 NSDSDIPMSDDCVMDPDFSDDSGEEMGLKEKKNSDKFSGSKGDIETAFKNNKIQNM 352
           +  S +       ++P      G  +  K+ +   K  GS   IET    + +Q +
Sbjct: 564 DRFSALFTDSAYAIEPSSKKFKGSLLVTKQAEQKSK--GSSTVIETKKPEDLVQKL 617


>U80447-2|AAO38637.1|  579|Caenorhabditis elegans Hypothetical
           protein F55F8.2b protein.
          Length = 579

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)

Query: 121 PNVRVDFKDEVKNEVIQNFIGYVEREQEDALVNVRSVSKRKSKQWTRKKLKRNRE 175
           P  RVD  D +K + I   I    R   D  ++V +    ++K+W RK  K  RE
Sbjct: 486 PLPRVDGSDSMKTKYITPEIVARLRSVGDNAIDVLNQKIDETKEWKRKSRKATRE 540


>U80447-1|AAB37806.1|  746|Caenorhabditis elegans Hypothetical
           protein F55F8.2a protein.
          Length = 746

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 18/55 (32%), Positives = 26/55 (47%)

Query: 121 PNVRVDFKDEVKNEVIQNFIGYVEREQEDALVNVRSVSKRKSKQWTRKKLKRNRE 175
           P  RVD  D +K + I   I    R   D  ++V +    ++K+W RK  K  RE
Sbjct: 653 PLPRVDGSDSMKTKYITPEIVARLRSVGDNAIDVLNQKIDETKEWKRKSRKATRE 707


>U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plus
           homeodomain, axonguidance protein 1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 454 HEQMLDERNAAHGSESFQSSAYKCETCILGFQYRRPYEAHLNSRHA 499
           H+  L E    H  E      ++C+ C+  F +   Y  H+N R++
Sbjct: 520 HKHHLTEHKRLHSGEK----PFQCDKCLKRFSHSGSYSQHMNHRYS 561


>AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 454 HEQMLDERNAAHGSESFQSSAYKCETCILGFQYRRPYEAHLNSRHA 499
           H+  L E    H  E      ++C+ C+  F +   Y  H+N R++
Sbjct: 520 HKHHLTEHKRLHSGEK----PFQCDKCLKRFSHSGSYSQHMNHRYS 561


>AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%)

Query: 454 HEQMLDERNAAHGSESFQSSAYKCETCILGFQYRRPYEAHLNSRHA 499
           H+  L E    H  E      ++C+ C+  F +   Y  H+N R++
Sbjct: 520 HKHHLTEHKRLHSGEK----PFQCDKCLKRFSHSGSYSQHMNHRYS 561


>AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical
           protein Y73F8A.34a protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 291 DEVKNENSDSDIPMSDDCVMDPDFSDDSGEEMG 323
           DE+ NEN+D D   SDD  MD   S  SGE  G
Sbjct: 5   DEIYNENNDLDEEFSDD--MDQQ-SGSSGESQG 34


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.313    0.130    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,880,745
Number of Sequences: 27539
Number of extensions: 574376
Number of successful extensions: 1651
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1606
Number of HSP's gapped (non-prelim): 65
length of query: 531
length of database: 12,573,161
effective HSP length: 85
effective length of query: 446
effective length of database: 10,232,346
effective search space: 4563626316
effective search space used: 4563626316
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)