GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001783-TA|BGIBMGA001783-PA|undefined
         (324 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   4.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   4.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   4.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   5.3  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   7.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   7.0  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 53  EISQNEYIEILPNVDCSGSPNVSA-DLKDKANNEV 86
           EIS   +++   N   +GSPNV   D K  +  E+
Sbjct: 446 EISVKRFVKFWTNFARNGSPNVDGPDWKPISKEEI 480


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 53  EISQNEYIEILPNVDCSGSPNVSA-DLKDKANNEV 86
           EIS   +++   N   +GSPNV   D K  +  E+
Sbjct: 446 EISVKRFVKFWTNFARNGSPNVDGPDWKPISKEEI 480


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 53  EISQNEYIEILPNVDCSGSPNVSA-DLKDKANNEV 86
           EIS   +++   N   +GSPNV   D K  +  E+
Sbjct: 448 EISVKRFVKFWTNFARNGSPNVDGPDWKPISKEEI 482


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 53  EISQNEYIEILPNVDCSGSPNV-SADLKDKANNEV 86
           EIS   +++   N   +GSPNV   D K  +  E+
Sbjct: 448 EISVKRFVKFWTNFARNGSPNVDEPDWKPISKEEI 482


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)

Query: 278 FEDDKIQNMDDEGDMTLKVKLEENEDL 304
           ++DD+    DDE  + LKV+  ++ ++
Sbjct: 320 YKDDQWIGYDDEESVALKVQFAKDHNM 346


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/30 (23%), Positives = 17/30 (56%)

Query: 218 SDICNQTDLDLELFVKDEVKSEHSDSDNDI 247
           +D+C + +   +L VK ++  +  D  N++
Sbjct: 311 TDLCQEANSTKKLIVKIKIDIDKEDERNEV 340


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.130    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,769
Number of Sequences: 317
Number of extensions: 3222
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 6
length of query: 324
length of database: 114,650
effective HSP length: 57
effective length of query: 267
effective length of database: 96,581
effective search space: 25787127
effective search space used: 25787127
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 43 (21.4 bits)