GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001783-TA|BGIBMGA001783-PA|undefined
         (324 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    30   0.076
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    28   0.31 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.8  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       23   8.8  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 30.3 bits (65), Expect = 0.076
 Identities = 19/83 (22%), Positives = 44/83 (53%), Gaps = 1/83 (1%)

Query: 231 FVKDEVKSEHSDSDNDISDECPIDADLAFDVAEKNGLSESEGDIETAFEDDKIQ-NMDDE 289
           +++ E+KS +    + IS +  +  DL  D+A++  L +   +   +FE  ++Q +  ++
Sbjct: 394 WIQGELKSLNKQIKDKISHQNKLQDDLKKDIAKQGELEKKIQEHTESFEQLRVQIDEHNK 453

Query: 290 GDMTLKVKLEENEDLQSDCLEEE 312
               LK K +  + L++D  ++E
Sbjct: 454 NFYELKKKKDHYQSLRNDIWKKE 476


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 0.31
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 272 GDIETAFEDDKIQNMDDEGDMT-LKVKLEENEDLQSDCLEE 311
           G  ETA + D +Q  DDE D+      ++EN++  SD  EE
Sbjct: 34  GFSETADDGDYVQKNDDEEDIVDSDFSIDENDEPISDAEEE 74


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 263  EKNGLSESEGDIETAFEDDKIQNMDDEGDMTLKVKLEENEDLQSDCLEEENDR 315
            E++G  + E D +   E+D ++N D E    L V    NE+  +   E  +DR
Sbjct: 1724 EEDGSDKEEDDDDDDGEEDDVENDDPELSSQLMVD-SMNENASNCSWEAVDDR 1775


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 266  GLSESEGDIETAFEDDKIQNMDDEGDMTLKVKLEENEDLQSDCLEEENDR 315
            G S+ E D     EDD ++N D E    L V    NE+  +   E  +DR
Sbjct: 1726 GGSDKEDDDGDDGEDDDVENDDPELSSQLMVD-SMNENASNCSWEAVDDR 1774


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 269 ESEGDIETAFEDDKIQNMDDEGDMTLKVKLE-ENEDLQSDCLEEE 312
           E E D +  F+DD   + D + D  +  +LE E ED   + L EE
Sbjct: 89  EYEFDDDLPFDDDSDFDDDSDFDDDVGDRLESEEEDSTDETLIEE 133


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.130    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,455
Number of Sequences: 2123
Number of extensions: 13346
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 5
length of query: 324
length of database: 516,269
effective HSP length: 64
effective length of query: 260
effective length of database: 380,397
effective search space: 98903220
effective search space used: 98903220
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 48 (23.4 bits)