Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001782-TA|BGIBMGA001782-PA|undefined
(87 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4Z333 Cluster: Putative uncharacterized protein; n=1; ... 37 0.091
UniRef50_UPI00005872C7 Cluster: PREDICTED: similar to ENSANGP000... 33 0.85
UniRef50_P35269 Cluster: Transcription initiation factor IIF sub... 33 1.1
UniRef50_Q8IBT9 Cluster: Putative uncharacterized protein PF07_0... 33 1.5
UniRef50_Q7RC48 Cluster: PHD-finger, putative; n=6; Plasmodium (... 33 1.5
UniRef50_UPI0000E45E0D Cluster: PREDICTED: similar to ZU5 and de... 32 2.0
UniRef50_P52701 Cluster: DNA mismatch repair protein MSH6; n=29;... 32 2.6
UniRef50_P27540 Cluster: Aryl hydrocarbon receptor nuclear trans... 32 2.6
UniRef50_UPI0000499A6F Cluster: ubiquitin carboxyl-terminal hydr... 31 3.4
UniRef50_Q1INS3 Cluster: Surface antigen (D15) precursor; n=1; A... 31 3.4
UniRef50_Q8GXH1 Cluster: Putative uncharacterized protein At4g17... 31 3.4
UniRef50_A0EIQ2 Cluster: Chromosome undetermined scaffold_99, wh... 31 3.4
UniRef50_Q5UQS5 Cluster: Uncharacterized protein R328; n=1; Acan... 31 3.4
UniRef50_A2ZGQ4 Cluster: Putative uncharacterized protein; n=1; ... 31 4.5
UniRef50_UPI000023F4A7 Cluster: hypothetical protein FG10292.1; ... 31 6.0
UniRef50_Q9XDT1 Cluster: Pectate lyase H; n=1; Bacillus sp. KSM-... 31 6.0
UniRef50_Q7PDP7 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=... 31 6.0
UniRef50_Q9LK83 Cluster: Genomic DNA, chromosome 5, TAC clone:K2... 30 7.9
UniRef50_Q54X54 Cluster: CAATT-binding protein; n=1; Dictyosteli... 30 7.9
UniRef50_Q5KGG8 Cluster: Eta DNA polymerase, putative; n=2; Filo... 30 7.9
UniRef50_Q2UQT0 Cluster: Predicted protein; n=6; Trichocomaceae|... 30 7.9
UniRef50_P34446 Cluster: Integrin alpha pat-2 precursor; n=2; Ca... 30 7.9
>UniRef50_Q4Z333 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 789
Score = 36.7 bits (81), Expect = 0.091
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 11 FSDDSGEEMGF-NPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAI 67
F+D+SG E N + SEK S K+R KG+ K+N K+ + +K+ KN+ ++I
Sbjct: 678 FTDNSGNETNEGNKLNSEK--SKKWRKEKGNEIKGCKENNKIINNNIIKVNKNIQLSI 733
>UniRef50_UPI00005872C7 Cluster: PREDICTED: similar to
ENSANGP00000019944, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to
ENSANGP00000019944, partial - Strongylocentrotus
purpuratus
Length = 929
Score = 33.5 bits (73), Expect = 0.85
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 2 SDDCVMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
S V + D +G ++ + S+ S++ S D++TAFK+ ++ L HL+I +
Sbjct: 197 SSGSVSNHDAMVTNGGDINQSSRNSKINSNETISDSTSDSKTAFKNCPEIPSLEHLRIMR 256
Query: 62 NM--SIAIPPRNSRISLNEKV 80
N S NS +S N+ V
Sbjct: 257 NSPESSIKHGGNSEVSANQTV 277
>UniRef50_P35269 Cluster: Transcription initiation factor IIF
subunit alpha; n=29; Eumetazoa|Rep: Transcription
initiation factor IIF subunit alpha - Homo sapiens
(Human)
Length = 517
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 1 MSDDCVMDPDFSDDSGEEMGFNPIPSEK----KSSDKFRGSKGDNETAFKDN 48
+ DD M D SD SGEE G P +K K K + KG ++ AF+D+
Sbjct: 210 LEDDLEMSSDASDASGEEGGRVPKAKKKAPLAKGGRKKKKKKGSDDEAFEDS 261
>UniRef50_Q8IBT9 Cluster: Putative uncharacterized protein
PF07_0067; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0067 - Plasmodium
falciparum (isolate 3D7)
Length = 1069
Score = 32.7 bits (71), Expect = 1.5
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 1 MSDDCVMDPDFSDD--SGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHL 57
+SDD + D + SDD S + + + I + S D + +NE DN K + L HL
Sbjct: 832 ISDDNISDDNISDDNISDDNISDDNISDDNISDDDVNRKRKNNEIETNDNNKDNTLLHL 890
>UniRef50_Q7RC48 Cluster: PHD-finger, putative; n=6; Plasmodium
(Vinckeia)|Rep: PHD-finger, putative - Plasmodium yoelii
yoelii
Length = 1167
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 26 SEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRN 71
S K +DKF+ +K NE + K+NTK S H + N+S + P +N
Sbjct: 1111 SNNKINDKFQKAKIKNEASPKNNTKPSPSRH-NLQTNVSTSSPNKN 1155
>UniRef50_UPI0000E45E0D Cluster: PREDICTED: similar to ZU5 and death
domain-containing inhibitor of NF-kB; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
ZU5 and death domain-containing inhibitor of NF-kB -
Strongylocentrotus purpuratus
Length = 730
Score = 32.3 bits (70), Expect = 2.0
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 12 SDDSGEEMG-FNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKI-TKNMSIAIPP 69
SDD +E G F + S K + + ++G TA+ ++TK +H+ I T N+ P
Sbjct: 546 SDDDDDEGGDFEKVTSTTKKTHLVKSTRGQMPTAYSESTKSRNTTHINIHTGNVVQPSKP 605
Query: 70 RNSRISLNE 78
+ R L +
Sbjct: 606 LDHRQLLQD 614
>UniRef50_P52701 Cluster: DNA mismatch repair protein MSH6; n=29;
Euteleostomi|Rep: DNA mismatch repair protein MSH6 -
Homo sapiens (Human)
Length = 1360
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNET-AFKDNTKVSRLSHLKITKNMS 64
V+ SD G ++ F P E+ SSD+ GD+E+ KV+R +T N S
Sbjct: 250 VISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGS 309
Query: 65 I 65
+
Sbjct: 310 L 310
>UniRef50_P27540 Cluster: Aryl hydrocarbon receptor nuclear
translocator; n=80; Euteleostomi|Rep: Aryl hydrocarbon
receptor nuclear translocator - Homo sapiens (Human)
Length = 789
Score = 31.9 bits (69), Expect = 2.6
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 48 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 99
>UniRef50_UPI0000499A6F Cluster: ubiquitin carboxyl-terminal
hydrolase; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
ubiquitin carboxyl-terminal hydrolase - Entamoeba
histolytica HM-1:IMSS
Length = 1316
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 23 PIPSEKKSSDKFRGSKGDN--ETAF---KDNTKVSRLSHLKITKNMSIAIPPRNSRISLN 77
PI E+KSS K + K ET F KD K + S L T SI+ ++S I LN
Sbjct: 912 PIEKEQKSSKKNKKGKSKKGYETKFEIIKDGEKKNGNSCLSSTLTSSISESTQSSSIDLN 971
Query: 78 EKVS 81
E+++
Sbjct: 972 EEIN 975
>UniRef50_Q1INS3 Cluster: Surface antigen (D15) precursor; n=1;
Acidobacteria bacterium Ellin345|Rep: Surface antigen
(D15) precursor - Acidobacteria bacterium (strain
Ellin345)
Length = 1002
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 20 GFNPIPSEKKSSDKFRGSKGDNETAFK-DNTKVSRLSHLKITKNMSIAIPPRNSRISLNE 78
GF + + D +RG GD F+ D + SR+ L + N++I ++SL+E
Sbjct: 421 GFQDVSVKADVEDNYRGKSGDLRIVFRIDEGEQSRVHTLTVIGNLAIPTAEFQPQLSLDE 480
>UniRef50_Q8GXH1 Cluster: Putative uncharacterized protein
At4g17060/dl4560c; n=2; Arabidopsis thaliana|Rep:
Putative uncharacterized protein At4g17060/dl4560c -
Arabidopsis thaliana (Mouse-ear cress)
Length = 434
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 2 SDDCVMDPDFSDDSGEEMGFNPIPSEKKSSDKFRG 36
S D D +F DD E GFNP +SS + G
Sbjct: 289 SQDLDYDDEFDDDRAEREGFNPRIQSSRSSSRVNG 323
>UniRef50_A0EIQ2 Cluster: Chromosome undetermined scaffold_99,
whole genome shotgun sequence; n=2;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_99, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 400
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 38 KGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
+G E K+ TKV +++I K++++ PR SR+SL EK+ + PI
Sbjct: 17 QGQKEKEQKEKTKVK---YVEI-KDVNVQFNPRPSRLSLEEKIKLLEPI 61
>UniRef50_Q5UQS5 Cluster: Uncharacterized protein R328; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein R328 - Mimivirus
Length = 343
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 4 DCVMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNM 63
DC+ D D D+S +E+ N + KS++K T+F K ++ ++ KITK +
Sbjct: 119 DCLEDMDNYDNSDDELDLN--ETTNKSTNKILDKLNIKTTSFTKLNKSTKFNNPKITKTI 176
>UniRef50_A2ZGQ4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 1176
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 41 NETAFKDNTKVS---RLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
+ T D TK+S RL +LK+T N ++ +P R + E + +D I
Sbjct: 539 DSTGIVDLTKISELVRLRYLKVTSNATVKLPTRLQGLQYLETLKIDGKI 587
>UniRef50_UPI000023F4A7 Cluster: hypothetical protein FG10292.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10292.1 - Gibberella zeae PH-1
Length = 927
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETA--FKDNTKVSRLSHL 57
V+D D DD G +P KK S G+ G + A KDN K +++++L
Sbjct: 868 VLDEDAGDDDGWSKVTSPAGGAKKWSSVANGTNGTPKAAKPIKDNIKDNKVAYL 921
>UniRef50_Q9XDT1 Cluster: Pectate lyase H; n=1; Bacillus sp.
KSM-P15|Rep: Pectate lyase H - Bacillus sp. KSM-P15
Length = 677
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKG-DNETAFKDNTKVSR-LSHLKITKNMSIAI 67
+F+ D G + N + E SSDK+ S D + NTK S+ +LK+T + I++
Sbjct: 575 NFAFDRGTHLFANNLSFEASSSDKYATSTDIDGSNLWWHNTKGSQNAKNLKVTASDFISL 634
Query: 68 PPRNSR 73
P SR
Sbjct: 635 IPTVSR 640
>UniRef50_Q7PDP7 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=6;
Plasmodium (Vinckeia)|Rep: ERYTHROCYTE MEMBRANE PROTEIN
PFEMP3 - Plasmodium yoelii yoelii
Length = 2112
Score = 30.7 bits (66), Expect = 6.0
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 14 DSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSR 73
D+ +E G +KK++ F N+ KDN+K+ + KN+SI N
Sbjct: 1288 DNLDEKGIEKFSKKKKNN--FSHKIQQNDDIPKDNSKIKNELYYLENKNVSI-----NKN 1340
Query: 74 ISLNEKVSVDNPI 86
+S+N+ VS++ +
Sbjct: 1341 VSINKNVSINKNV 1353
>UniRef50_Q9LK83 Cluster: Genomic DNA, chromosome 5, TAC
clone:K23F3; n=3; core eudicotyledons|Rep: Genomic DNA,
chromosome 5, TAC clone:K23F3 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1156
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 2 SDDCVMDPDFSDDS-GEEMGFNPIPSEKKSSDKFRGSKGDNETAF--KDNTKVSRLSHLK 58
S+D + SD G E+ F+ E + ++ G + D E F K N+K++R LK
Sbjct: 48 SNDNMSIESVSDTGEGNELLFSDYDVEDEEEEEVIGRRYDEEEVFGDKSNSKLNR-GMLK 106
Query: 59 ITKNMSIAIPPRNSRIS 75
KN+ I +P N R++
Sbjct: 107 -DKNLRIEVPFMNRRVT 122
>UniRef50_Q54X54 Cluster: CAATT-binding protein; n=1; Dictyostelium
discoideum AX4|Rep: CAATT-binding protein - Dictyostelium
discoideum AX4
Length = 1053
Score = 30.3 bits (65), Expect = 7.9
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 3 DDCVMDPDFSD-DSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DD V PDF D D GEE G +++ SD + + N AF D + + +
Sbjct: 957 DDDVQTPDFGDEDDGEEDGEGEEEEDEEKSDFLKSMQ--NNDAFMDADDFAEMLEKSGSS 1014
Query: 62 NMSIAIPPRNSRIS 75
N + + S+ S
Sbjct: 1015 NSKSSYKKKGSKSS 1028
>UniRef50_Q5KGG8 Cluster: Eta DNA polymerase, putative; n=2;
Filobasidiella neoformans|Rep: Eta DNA polymerase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 690
Score = 30.3 bits (65), Expect = 7.9
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 23 PIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAI-PPRNSRISLNEKVS 81
P+ KK D F K + T+ ++ +S S ++ I PP++SRIS + K
Sbjct: 542 PLSKRKKGLDAFLIKKPSDVTSSSSHSNISTPSSASVSDLEITPIEPPQSSRISSHTKTD 601
Query: 82 VDN 84
+D+
Sbjct: 602 MDS 604
>UniRef50_Q2UQT0 Cluster: Predicted protein; n=6;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 454
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 35 RGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRN-SRISLNEKVS 81
R S G F DN S LS + + +PPR S ISL + ++
Sbjct: 191 RPSTGHESITFGDNDATSHLSEYAVGDTSGLGLPPRKASTISLTQTIT 238
>UniRef50_P34446 Cluster: Integrin alpha pat-2 precursor; n=2;
Caenorhabditis|Rep: Integrin alpha pat-2 precursor -
Caenorhabditis elegans
Length = 1226
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 8 DPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLS 55
D DF + + NP P +KK + RG ++ F D + +LS
Sbjct: 1002 DEDFDRAGSKRVKRNPTPKKKKKGGEHRGEPRSDKARFSDLREAVKLS 1049
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.309 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,188,765
Number of Sequences: 1657284
Number of extensions: 3792220
Number of successful extensions: 8259
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 8253
Number of HSP's gapped (non-prelim): 23
length of query: 87
length of database: 575,637,011
effective HSP length: 65
effective length of query: 22
effective length of database: 467,913,551
effective search space: 10294098122
effective search space used: 10294098122
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 65 (30.3 bits)
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