Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001782-TA|BGIBMGA001782-PA|undefined
(87 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 0.29
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 27 0.51
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 0.51
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 25 1.2
SPCC645.08c |snd1||RNA-binding protein Snd1|Schizosaccharomyces ... 25 1.6
SPAC2F7.07c |||histone deacetylase complex subunit Rco1 |Schizos... 25 1.6
SPAC1687.13c |csn5||COP9/signalosome complex subunit Csn5|Schizo... 25 2.1
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 25 2.1
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 24 2.7
SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit Sf... 24 2.7
SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosacc... 24 3.6
SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces ... 23 4.7
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 23 4.7
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 23 6.3
SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 23 6.3
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 23 6.3
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 23 6.3
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 23 8.3
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 23 8.3
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 23 8.3
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.5 bits (58), Expect = 0.29
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 12 SDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRN 71
S DS +E + +KK +D+ S + KD K S L +K IPP +
Sbjct: 694 SGDSDKEHKEHKKDKQKKKNDQISSSSKSASSFKKDRDKESIFGSLFGSKKKQTEIPPVS 753
Query: 72 SRISLNEKVSVDNPI 86
S N+ PI
Sbjct: 754 SSPPHNDAPPKAKPI 768
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 26.6 bits (56), Expect = 0.51
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 2 SDDCVMDPDFSDDSGEEMGFNPIPSEKKSS 31
S++ D SD+S +E NPIP EK++S
Sbjct: 546 SEESGSSSDESDNSEKEDRSNPIPVEKRAS 575
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 0.51
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 21 FNPI-PSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIA 66
F P+ S K+SDK+ GS GD + ++ +S +S + +SI+
Sbjct: 70 FTPLLQSSNKNSDKYNGSLGDKGSFDPNSYGLSAISKQATQEALSIS 116
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 25.4 bits (53), Expect = 1.2
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 26 SEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNP 85
++ + +++ +KG N T K N K S+ NMS N+ S + K S+ +P
Sbjct: 781 NDNEKAEESNETKGFNTTIAKQNDKSSKSEGKASVANMSALNKSTNNETS-DSKPSLKSP 839
Query: 86 I 86
+
Sbjct: 840 L 840
>SPCC645.08c |snd1||RNA-binding protein Snd1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 878
Score = 25.0 bits (52), Expect = 1.6
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 52 SRLSHLKITKNMSIAIPPRNSRISLNEKVSV 82
+++S L I KN+S++IP NS +SL + +V
Sbjct: 302 AKISRLGIWKNISVSIPDINS-LSLKDYSAV 331
>SPAC2F7.07c |||histone deacetylase complex subunit Rco1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 25.0 bits (52), Expect = 1.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 21 FNPIPSEKKSSDKFRGSKGDNETAFKDN 48
F PI +++ S K KG+N K+N
Sbjct: 136 FRPIVPDQERSRKINPQKGNNNNLLKEN 163
>SPAC1687.13c |csn5||COP9/signalosome complex subunit
Csn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 299
Score = 24.6 bits (51), Expect = 2.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIP 68
E+K K R S ++ F + K+S ++ LK+ +++S +P
Sbjct: 13 EEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMP 54
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 24.6 bits (51), Expect = 2.1
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 9 PDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKD 47
P SD+ +GF P P +K +F+ S N TA D
Sbjct: 549 PTNSDEKSHALGFPPPPGQK---IEFQRSSSKNGTAKSD 584
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 24.2 bits (50), Expect = 2.7
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 24 IPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSV 82
+P+ K S + RGS D+ T+ + T+++ + + KN I NS N VS+
Sbjct: 10 MPTVKDDSTRSRGSDVDSFTSTDNVTQINVEAAISENKNEEKPIQD-NSEQEFNPHVSI 67
>SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit
Sfc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1339
Score = 24.2 bits (50), Expect = 2.7
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 29 KSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDN 84
K+S +RG F ++ V + HL+ N+S ++P +N +S + + N
Sbjct: 550 KTSRIYRGLAPLKNPEFNED-HVKKAEHLEPLLNVSSSVPSKNFTVSSPDHLKYGN 604
>SPAC26H5.06 |pot1||telomere end-binding protein Pot1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 555
Score = 23.8 bits (49), Expect = 3.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 9 PDFSDDSGEEMGFNPIPSEKKSSDK 33
PDFS +S + + P+P K+ DK
Sbjct: 133 PDFSSNSKDTLCPQPMPRLMKTGDK 157
>SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 23.4 bits (48), Expect = 4.7
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 41 NETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRI 74
N + + NT+ LS L + +N+S IP ++SR+
Sbjct: 196 NLSRYYGNTEA--LSSLPLPRNLSADIPAKSSRL 227
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 23.4 bits (48), Expect = 4.7
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 8 DPDFSDDSGEEMGFNPIPSEKKSSDKFRG 36
DP S + GFN + S KK RG
Sbjct: 69 DPYAGMTSDTKKGFNSVESRKKEQSDVRG 97
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 709
Score = 23.0 bits (47), Expect = 6.3
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 14 DSGEEMGFNPIPSEKKSSDKFRGSKGDN 41
+S +E NP+ +K + + +G+K DN
Sbjct: 66 NSQKEKVINPVFDPRKPAHELKGNKRDN 93
>SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 23.0 bits (47), Expect = 6.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 67 IPPRNSRISLNEKVSVDNPIR 87
IPP S +SL +S+ P++
Sbjct: 322 IPPETSDVSLKSAMSIFGPVK 342
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 23.0 bits (47), Expect = 6.3
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 31 SDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEK 79
++K +N F D +S +L+ +N S ++ +N R+ LNE+
Sbjct: 11 NNKLVSKAKENGVEFSDLFLLSS-GYLRDRENASASVSSKNERMVLNEE 58
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 23.0 bits (47), Expect = 6.3
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 18 EMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVS 52
E GF I + DKF+ + D + TK +
Sbjct: 3116 ENGFKKIKETSQGIDKFKEALSDQQNVLFSKTKTA 3150
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 22.6 bits (46), Expect = 8.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 62 NMSIAIPPRNSRISLNEKVSV 82
N SI +PPR + L E VSV
Sbjct: 699 NPSILVPPRPNETPLYEIVSV 719
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 22.6 bits (46), Expect = 8.3
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 17 EEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLS 55
EE+ F P+P S F S D KDN S S
Sbjct: 116 EEL-FEPMPRNSSPSSTFSTSTSDLNNIEKDNLVNSEYS 153
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 22.6 bits (46), Expect = 8.3
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 9 PDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMS--IA 66
P F+ D + P+PS ++ F + + T +T ++ + T + S
Sbjct: 24 PGFTTDVATTVTPTPLPSANVTTTSFSSASTETSTHSVTSTNITSIVPPPSTSHNSTTTT 83
Query: 67 IPPRNS 72
+PP S
Sbjct: 84 VPPTTS 89
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,148
Number of Sequences: 5004
Number of extensions: 17304
Number of successful extensions: 53
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 21
length of query: 87
length of database: 2,362,478
effective HSP length: 61
effective length of query: 26
effective length of database: 2,057,234
effective search space: 53488084
effective search space used: 53488084
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 46 (22.6 bits)
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