Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001782-TA|BGIBMGA001782-PA|undefined
(87 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64037-1|CAA45408.1| 517|Homo sapiens RNA polymerase II associa... 33 0.14
X64002-1|CAA45404.1| 517|Homo sapiens RAP74 protein. 33 0.14
CR456798-1|CAG33079.1| 517|Homo sapiens GTF2F1 protein. 33 0.14
BT007097-1|AAP35761.1| 517|Homo sapiens general transcription f... 33 0.14
BC013007-1|AAH13007.1| 517|Homo sapiens general transcription f... 33 0.14
BC000120-1|AAH00120.1| 517|Homo sapiens general transcription f... 33 0.14
Y18859-1|CAC21446.1| 789|Homo sapiens aryl hydrocarbon receptor... 32 0.33
U73737-1|AAB47425.1| 1360|Homo sapiens hMSH6 protein. 32 0.33
U54777-1|AAB39212.2| 1360|Homo sapiens hMSH6 protein protein. 32 0.33
U28946-1|AAC50461.1| 1360|Homo sapiens G/T mismatch binding prot... 32 0.33
M69238-1|AAA51777.1| 789|Homo sapiens Arnt protein. 32 0.33
D89646-1|BAA23675.1| 1068|Homo sapiens GTBP-ALT protein. 32 0.33
D89645-2|BAA23673.1| 1068|Homo sapiens GTBP-ALT protein. 32 0.33
D89645-1|BAA23674.1| 1360|Homo sapiens GTBP-N protein. 32 0.33
BC060838-1|AAH60838.1| 416|Homo sapiens ARNT protein protein. 32 0.33
BC004246-1|AAH04246.1| 1360|Homo sapiens mutS homolog 6 (E. coli... 32 0.33
AY430083-1|AAQ96598.1| 789|Homo sapiens aryl hydrocarbon recept... 32 0.33
AY082894-1|AAL87401.1| 1358|Homo sapiens mutS homolog 6 (E. coli... 32 0.33
AL834279-1|CAD38953.1| 849|Homo sapiens hypothetical protein pr... 32 0.33
AL355860-3|CAI12797.1| 789|Homo sapiens aryl hydrocarbon recept... 32 0.33
AK223459-1|BAD97179.1| 315|Homo sapiens aryl hydrocarbon recept... 32 0.33
AF001307-1|AAC03365.1| 328|Homo sapiens aryl hydrocarbon recept... 32 0.33
AB209877-1|BAD93114.1| 791|Homo sapiens aryl hydrocarbon recept... 32 0.33
U51432-1|AAC15912.1| 536|Homo sapiens nuclear protein Skip prot... 29 2.3
U43960-1|AAB48857.1| 255|Homo sapiens unknown protein. 29 2.3
CR457433-1|CAG33714.1| 536|Homo sapiens SNW1 protein. 29 2.3
BT020061-1|AAV38864.1| 536|Homo sapiens SKI-interacting protein... 29 2.3
BT020060-1|AAV38863.1| 536|Homo sapiens SKI-interacting protein... 29 2.3
BC108903-1|AAI08904.1| 536|Homo sapiens SNW domain containing 1... 29 2.3
BC046105-1|AAH46105.2| 531|Homo sapiens SNW1 protein protein. 29 2.3
BC040112-1|AAH40112.1| 531|Homo sapiens SNW1 protein protein. 29 2.3
AF045184-1|AAC31697.1| 536|Homo sapiens nuclear receptor coacti... 29 2.3
AC008372-1|AAF23325.1| 536|Homo sapiens nuclear receptor coacti... 29 2.3
M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box p... 28 4.0
EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containi... 28 4.0
BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein. 28 4.0
BC005116-1|AAH05116.1| 709|Homo sapiens structure specific reco... 28 4.0
AL831917-1|CAD38578.1| 2162|Homo sapiens hypothetical protein pr... 28 4.0
AL713895-2|CAI10948.1| 2081|Homo sapiens jumonji domain containi... 28 4.0
AB037801-1|BAA92618.1| 1265|Homo sapiens KIAA1380 protein protein. 28 4.0
X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila F... 27 7.0
>X64037-1|CAA45408.1| 517|Homo sapiens RNA polymerase II associated
protein RAP74 protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 1 MSDDCVMDPDFSDDSGEEMGFNPIPSEK----KSSDKFRGSKGDNETAFKDN 48
+ DD M D SD SGEE G P +K K K + KG ++ AF+D+
Sbjct: 210 LEDDLEMSSDASDASGEEGGRVPKAKKKAPLAKGGRKKKKKKGSDDEAFEDS 261
>X64002-1|CAA45404.1| 517|Homo sapiens RAP74 protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 1 MSDDCVMDPDFSDDSGEEMGFNPIPSEK----KSSDKFRGSKGDNETAFKDN 48
+ DD M D SD SGEE G P +K K K + KG ++ AF+D+
Sbjct: 210 LEDDLEMSSDASDASGEEGGRIPKAKKKAPLAKGGRKKKKKKGSDDEAFEDS 261
>CR456798-1|CAG33079.1| 517|Homo sapiens GTF2F1 protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 1 MSDDCVMDPDFSDDSGEEMGFNPIPSEK----KSSDKFRGSKGDNETAFKDN 48
+ DD M D SD SGEE G P +K K K + KG ++ AF+D+
Sbjct: 210 LEDDLEMSSDASDASGEEGGRVPKAKKKAPLAKGGRKKKKKKGSDDEAFEDS 261
>BT007097-1|AAP35761.1| 517|Homo sapiens general transcription
factor IIF, polypeptide 1, 74kDa protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 1 MSDDCVMDPDFSDDSGEEMGFNPIPSEK----KSSDKFRGSKGDNETAFKDN 48
+ DD M D SD SGEE G P +K K K + KG ++ AF+D+
Sbjct: 210 LEDDLEMSSDASDASGEEGGRVPKAKKKAPLAKGGRKKKKKKGSDDEAFEDS 261
>BC013007-1|AAH13007.1| 517|Homo sapiens general transcription
factor IIF, polypeptide 1, 74kDa protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 1 MSDDCVMDPDFSDDSGEEMGFNPIPSEK----KSSDKFRGSKGDNETAFKDN 48
+ DD M D SD SGEE G P +K K K + KG ++ AF+D+
Sbjct: 210 LEDDLEMSSDASDASGEEGGRVPKAKKKAPLAKGGRKKKKKKGSDDEAFEDS 261
>BC000120-1|AAH00120.1| 517|Homo sapiens general transcription
factor IIF, polypeptide 1, 74kDa protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 1 MSDDCVMDPDFSDDSGEEMGFNPIPSEK----KSSDKFRGSKGDNETAFKDN 48
+ DD M D SD SGEE G P +K K K + KG ++ AF+D+
Sbjct: 210 LEDDLEMSSDASDASGEEGGRVPKAKKKAPLAKGGRKKKKKKGSDDEAFEDS 261
>Y18859-1|CAC21446.1| 789|Homo sapiens aryl hydrocarbon receptor
nuclear translocator, ARNT protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 48 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 99
>U73737-1|AAB47425.1| 1360|Homo sapiens hMSH6 protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNET-AFKDNTKVSRLSHLKITKNMS 64
V+ SD G ++ F P E+ SSD+ GD+E+ KV+R +T N S
Sbjct: 250 VISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGS 309
Query: 65 I 65
+
Sbjct: 310 L 310
>U54777-1|AAB39212.2| 1360|Homo sapiens hMSH6 protein protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNET-AFKDNTKVSRLSHLKITKNMS 64
V+ SD G ++ F P E+ SSD+ GD+E+ KV+R +T N S
Sbjct: 250 VISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGS 309
Query: 65 I 65
+
Sbjct: 310 L 310
>U28946-1|AAC50461.1| 1360|Homo sapiens G/T mismatch binding protein
protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNET-AFKDNTKVSRLSHLKITKNMS 64
V+ SD G ++ F P E+ SSD+ GD+E+ KV+R +T N S
Sbjct: 250 VISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGS 309
Query: 65 I 65
+
Sbjct: 310 L 310
>M69238-1|AAA51777.1| 789|Homo sapiens Arnt protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 48 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 99
>D89646-1|BAA23675.1| 1068|Homo sapiens GTBP-ALT protein.
Length = 1068
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNET-AFKDNTKVSRLSHLKITKNMS 64
V+ SD G ++ F P E+ SSD+ GD+E+ KV+R +T N S
Sbjct: 250 VISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGS 309
Query: 65 I 65
+
Sbjct: 310 L 310
>D89645-2|BAA23673.1| 1068|Homo sapiens GTBP-ALT protein.
Length = 1068
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNET-AFKDNTKVSRLSHLKITKNMS 64
V+ SD G ++ F P E+ SSD+ GD+E+ KV+R +T N S
Sbjct: 250 VISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGS 309
Query: 65 I 65
+
Sbjct: 310 L 310
>D89645-1|BAA23674.1| 1360|Homo sapiens GTBP-N protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNET-AFKDNTKVSRLSHLKITKNMS 64
V+ SD G ++ F P E+ SSD+ GD+E+ KV+R +T N S
Sbjct: 250 VISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGS 309
Query: 65 I 65
+
Sbjct: 310 L 310
>BC060838-1|AAH60838.1| 416|Homo sapiens ARNT protein protein.
Length = 416
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 48 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 99
>BC004246-1|AAH04246.1| 1360|Homo sapiens mutS homolog 6 (E. coli)
protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNET-AFKDNTKVSRLSHLKITKNMS 64
V+ SD G ++ F P E+ SSD+ GD+E+ KV+R +T N S
Sbjct: 250 VISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGS 309
Query: 65 I 65
+
Sbjct: 310 L 310
>AY430083-1|AAQ96598.1| 789|Homo sapiens aryl hydrocarbon
receptor nuclear translocator protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 48 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 99
>AY082894-1|AAL87401.1| 1358|Homo sapiens mutS homolog 6 (E. coli)
protein.
Length = 1358
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 6 VMDPDFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNET-AFKDNTKVSRLSHLKITKNMS 64
V+ SD G ++ F P E+ SSD+ GD+E+ KV+R +T N S
Sbjct: 250 VISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGS 309
Query: 65 I 65
+
Sbjct: 310 L 310
>AL834279-1|CAD38953.1| 849|Homo sapiens hypothetical protein
protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 113 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 164
>AL355860-3|CAI12797.1| 789|Homo sapiens aryl hydrocarbon
receptor nuclear translocator protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 48 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 99
>AK223459-1|BAD97179.1| 315|Homo sapiens aryl hydrocarbon
receptor nuclear translocator isoform 2 variant
protein.
Length = 315
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 48 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 99
>AF001307-1|AAC03365.1| 328|Homo sapiens aryl hydrocarbon
receptor nuclear translocator protein.
Length = 328
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 48 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 99
>AB209877-1|BAD93114.1| 791|Homo sapiens aryl hydrocarbon receptor
nuclear translocator isoform 1 variant protein.
Length = 791
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 10 DFSDDSGEEMGFNPIPSEKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITK 61
DF DD F ++ S+DK R ++ D+E + D +++R +H +I +
Sbjct: 52 DFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIER 103
>U51432-1|AAC15912.1| 536|Homo sapiens nuclear protein Skip
protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 333 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 392
>U43960-1|AAB48857.1| 255|Homo sapiens unknown protein.
Length = 255
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 52 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 111
>CR457433-1|CAG33714.1| 536|Homo sapiens SNW1 protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 333 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 392
>BT020061-1|AAV38864.1| 536|Homo sapiens SKI-interacting protein
protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 333 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 392
>BT020060-1|AAV38863.1| 536|Homo sapiens SKI-interacting protein
protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 333 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 392
>BC108903-1|AAI08904.1| 536|Homo sapiens SNW domain containing 1
protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 333 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 392
>BC046105-1|AAH46105.2| 531|Homo sapiens SNW1 protein protein.
Length = 531
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 328 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 387
>BC040112-1|AAH40112.1| 531|Homo sapiens SNW1 protein protein.
Length = 531
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 328 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 387
>AF045184-1|AAC31697.1| 536|Homo sapiens nuclear receptor
coactivator NCoA-62 protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 333 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 392
>AC008372-1|AAF23325.1| 536|Homo sapiens nuclear receptor
coactivator NCoA-62 protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 27 EKKSSDKFRGSKGDNETAFKDNTKVSRLSHLKITKNMSIAIPPRNSRISLNEKVSVDNPI 86
E+++ K K D E +D + R + +N+S A P + S++ NE + I
Sbjct: 333 ERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVI 392
>M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box
protein.
Length = 709
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 10 DFSDDSGEEM--GFNPIPSEKKSSDKF----RGSKGDNE-TAFKDNTKVSRLSHLKITKN 62
D SDDSGEE FNP E+ +++F S NE + +D K +L K+ K+
Sbjct: 469 DSSDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKD 528
>EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containing 1
C splice variant protein.
Length = 2358
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 8 DPDFSDDSGEEMGFN-PIPSEKKSSDKFRGSKGDNETAFKDNTKVSR----LSHLKITKN 62
D D S+ E+ P P+ KK + + KG+ E K N +SR S LK+ N
Sbjct: 1448 DSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAKERSKLKLQSN 1507
Query: 63 MSIAIP 68
+ IP
Sbjct: 1508 SNTGIP 1513
>BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein.
Length = 633
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 10 DFSDDSGEEM--GFNPIPSEKKSSDKF----RGSKGDNE-TAFKDNTKVSRLSHLKITKN 62
D SDDSGEE FNP E+ +++F S NE + +D K +L K+ K+
Sbjct: 469 DSSDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKD 528
>BC005116-1|AAH05116.1| 709|Homo sapiens structure specific
recognition protein 1 protein.
Length = 709
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 10 DFSDDSGEEM--GFNPIPSEKKSSDKF----RGSKGDNE-TAFKDNTKVSRLSHLKITKN 62
D SDDSGEE FNP E+ +++F S NE + +D K +L K+ K+
Sbjct: 469 DSSDDSGEETDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKD 528
>AL831917-1|CAD38578.1| 2162|Homo sapiens hypothetical protein
protein.
Length = 2162
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 8 DPDFSDDSGEEMGFN-PIPSEKKSSDKFRGSKGDNETAFKDNTKVSR----LSHLKITKN 62
D D S+ E+ P P+ KK + + KG+ E K N +SR S LK+ N
Sbjct: 1252 DSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAKERSKLKLQSN 1311
Query: 63 MSIAIP 68
+ IP
Sbjct: 1312 SNTGIP 1317
>AL713895-2|CAI10948.1| 2081|Homo sapiens jumonji domain containing 1C
protein.
Length = 2081
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 8 DPDFSDDSGEEMGFN-PIPSEKKSSDKFRGSKGDNETAFKDNTKVSR----LSHLKITKN 62
D D S+ E+ P P+ KK + + KG+ E K N +SR S LK+ N
Sbjct: 1171 DSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAKERSKLKLQSN 1230
Query: 63 MSIAIP 68
+ IP
Sbjct: 1231 SNTGIP 1236
>AB037801-1|BAA92618.1| 1265|Homo sapiens KIAA1380 protein protein.
Length = 1265
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 8 DPDFSDDSGEEMGFN-PIPSEKKSSDKFRGSKGDNETAFKDNTKVSR----LSHLKITKN 62
D D S+ E+ P P+ KK + + KG+ E K N +SR S LK+ N
Sbjct: 356 DSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAKERSKLKLQSN 415
Query: 63 MSIAIP 68
+ IP
Sbjct: 416 SNTGIP 421
>X87241-1|CAA60685.1| 4590|Homo sapiens homologue of Drosophila Fat
protein protein.
Length = 4590
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 43 TAFKDNTKVSRLSHLKITKNMSIAIPPRNS 72
T+ K N K S+ SHLK T+++ A+ NS
Sbjct: 1966 TSVKINVKESKESHLKFTQDVYSAVVKENS 1995
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.309 0.128 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,803,913
Number of Sequences: 224733
Number of extensions: 457090
Number of successful extensions: 840
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 812
Number of HSP's gapped (non-prelim): 41
length of query: 87
length of database: 73,234,838
effective HSP length: 65
effective length of query: 22
effective length of database: 58,627,193
effective search space: 1289798246
effective search space used: 1289798246
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -