Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001781-TA|BGIBMGA001781-PA|IPR012934|Zinc finger,
AD-type
(1137 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 33 0.015
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 28 0.32
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 28 0.32
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 28 0.32
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 28 0.32
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 24 5.1
DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory pro... 24 6.8
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 32.7 bits (71), Expect = 0.015
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 17/179 (9%)
Query: 211 TSDICNPTDVQIVFMQNEDINENSTECFLSEVPHETSDICNPTNVQIVSVQDENINEN-- 268
TS PT V +F+QN + EN+ + + P+E C +V +++E+I E
Sbjct: 154 TSKSLVPTPVTHIFLQNLILKENTYDAVIKWSPNEDYS-C---EYNLVWIKEESIYEERI 209
Query: 269 STECFLNEVTHETSDICNPMNPQI-VFVQNEDINGNSTECFLN-EVP-----HETSDICN 321
S L+E T +D+ N + + ++E S + LN P T + C
Sbjct: 210 SVVSGLHEAT--LTDLALGENYTVQIMAKSESSPFESLKKSLNFRTPSCLETFHTLEKCR 267
Query: 322 PTDVQIVFMQNEDINENSTECFLSEVPHEMSDICNPTNVEIVFVQNEDINENSTECFLN 380
P Q + + NE I + S + + + D+ P F+ + N N TE FLN
Sbjct: 268 PDPPQNLVI-NESIIDLSQQTYNVHLMWSKPDLI-PNYYIAHFINIDPENHNKTEIFLN 324
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 28.3 bits (60), Expect = 0.32
Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 4/150 (2%)
Query: 658 VRVRKFTACLVNELPRAKSDISKPKNLQS-AFVQDEDKNEDSGRDIQISXXXXXXXXXXX 716
V V+K L E +A+ K K F+Q ++D I+IS
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123
Query: 717 XXEKNGFSGSKEDIETAFEDDDLNEYLQ-TEVSSPPRSKITNNKPTAISSNADCSGSPKA 775
+ S +I + E LN+ L E + P I+ + + SS D
Sbjct: 1124 HQKAGDEKASLINIADSLEM--LNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAV 1181
Query: 776 SVDLKDIAKNEVNQDLTSSVDHQQQDALVN 805
+ + D + NE + + S+V ++D LVN
Sbjct: 1182 TEEGGDESANETDSETVSTVPQNKRDDLVN 1211
Score = 23.8 bits (49), Expect = 6.8
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1038 NSVPNKFSGRNGDIETAFEDDDLN---EYLQTEVSSPPSLKISNNK 1080
+S+P K NG + AFE+D+ + LQ + + + K SN++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 28.3 bits (60), Expect = 0.32
Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 4/150 (2%)
Query: 658 VRVRKFTACLVNELPRAKSDISKPKNLQS-AFVQDEDKNEDSGRDIQISXXXXXXXXXXX 716
V V+K L E +A+ K K F+Q ++D I+IS
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123
Query: 717 XXEKNGFSGSKEDIETAFEDDDLNEYLQ-TEVSSPPRSKITNNKPTAISSNADCSGSPKA 775
+ S +I + E LN+ L E + P I+ + + SS D
Sbjct: 1124 HQKAGDEKASLINIADSLEM--LNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAV 1181
Query: 776 SVDLKDIAKNEVNQDLTSSVDHQQQDALVN 805
+ + D + NE + + S+V ++D LVN
Sbjct: 1182 TEEGGDESANETDSETVSTVPQNKRDDLVN 1211
Score = 23.8 bits (49), Expect = 6.8
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1038 NSVPNKFSGRNGDIETAFEDDDLN---EYLQTEVSSPPSLKISNNK 1080
+S+P K NG + AFE+D+ + LQ + + + K SN++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 28.3 bits (60), Expect = 0.32
Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 4/150 (2%)
Query: 658 VRVRKFTACLVNELPRAKSDISKPKNLQS-AFVQDEDKNEDSGRDIQISXXXXXXXXXXX 716
V V+K L E +A+ K K F+Q ++D I+IS
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123
Query: 717 XXEKNGFSGSKEDIETAFEDDDLNEYLQ-TEVSSPPRSKITNNKPTAISSNADCSGSPKA 775
+ S +I + E LN+ L E + P I+ + + SS D
Sbjct: 1124 HQKAGDEKASLINIADSLEM--LNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAV 1181
Query: 776 SVDLKDIAKNEVNQDLTSSVDHQQQDALVN 805
+ + D + NE + + S+V ++D LVN
Sbjct: 1182 TEEGGDESANETDSETVSTVPQNKRDDLVN 1211
Score = 23.8 bits (49), Expect = 6.8
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1038 NSVPNKFSGRNGDIETAFEDDDLN---EYLQTEVSSPPSLKISNNK 1080
+S+P K NG + AFE+D+ + LQ + + + K SN++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 28.3 bits (60), Expect = 0.32
Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 4/150 (2%)
Query: 658 VRVRKFTACLVNELPRAKSDISKPKNLQS-AFVQDEDKNEDSGRDIQISXXXXXXXXXXX 716
V V+K L E +A+ K K F+Q ++D I+IS
Sbjct: 1064 VAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTSDDDEGSIEISLAGLFKCMLCT 1123
Query: 717 XXEKNGFSGSKEDIETAFEDDDLNEYLQ-TEVSSPPRSKITNNKPTAISSNADCSGSPKA 775
+ S +I + E LN+ L E + P I+ + + SS D
Sbjct: 1124 HQKAGDEKASLINIADSLEM--LNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAV 1181
Query: 776 SVDLKDIAKNEVNQDLTSSVDHQQQDALVN 805
+ + D + NE + + S+V ++D LVN
Sbjct: 1182 TEEGGDESANETDSETVSTVPQNKRDDLVN 1211
Score = 23.8 bits (49), Expect = 6.8
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1038 NSVPNKFSGRNGDIETAFEDDDLN---EYLQTEVSSPPSLKISNNK 1080
+S+P K NG + AFE+D+ + LQ + + + K SN++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 24.2 bits (50), Expect = 5.1
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 386 MSDICNPTNV--EIVFAQAEDINENSGRVNQDLISSVDHQQQDAVVNAKSVFREK----F 439
++D+C N +++ DI++ R N+ + S++ Q + + A F F
Sbjct: 310 VTDLCQEANSTKKLIVKIKIDIDKEDER-NEVISSALKLSQNELEITACKFFSIDNALLF 368
Query: 440 QRWSPKKLKTKSKISLDKE 458
S KKL K +I +DKE
Sbjct: 369 SANSTKKLIVKIRIDIDKE 387
>DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory
protein 4 protein.
Length = 133
Score = 23.8 bits (49), Expect = 6.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 25 NVVPEDKILKYYVDSLRE 42
NVV +++LK YVD L E
Sbjct: 37 NVVKNERLLKSYVDCLLE 54
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.311 0.128 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,418
Number of Sequences: 317
Number of extensions: 10310
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 13
length of query: 1137
length of database: 114,650
effective HSP length: 64
effective length of query: 1073
effective length of database: 94,362
effective search space: 101250426
effective search space used: 101250426
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)
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