Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001781-TA|BGIBMGA001781-PA|IPR012934|Zinc finger,
AD-type
(1137 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 37 0.071
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 37 0.071
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 37 0.071
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 37 0.071
Z81453-5|CAB03796.1| 294|Caenorhabditis elegans Hypothetical pr... 34 0.66
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ... 33 0.88
AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone deace... 33 0.88
Z37139-5|CAA85490.1| 558|Caenorhabditis elegans Hypothetical pr... 32 2.7
Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical pr... 31 3.5
AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical ... 31 4.7
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 6.2
Z81522-1|CAB61004.1| 264|Caenorhabditis elegans Hypothetical pr... 31 6.2
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 6.2
Z70309-5|CAB54290.2| 402|Caenorhabditis elegans Hypothetical pr... 31 6.2
Z70309-4|CAA94359.2| 388|Caenorhabditis elegans Hypothetical pr... 31 6.2
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 6.2
L14745-14|AAA27925.1| 142|Caenorhabditis elegans Hypothetical p... 30 8.2
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 37.1 bits (82), Expect = 0.071
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 367 NEDINENSTECFLNEVLHEMSDICNPTNVE-IVFAQAEDINENSGRVNQDLISSVDHQQQ 425
+E+ ++S+E N + +E D+ N E IV ++ED+ E++ L + DH +
Sbjct: 321 SEEPTQSSSETEKN-LQNEKIDVEFIENSEAIVQNESEDVPESNSTSGTVLENIEDHLES 379
Query: 426 DAVV---NAKSVFREKFQRWSPKKLKTKSKISLDKE-KFTTCFVDDLPRATSDICNPTNA 481
D V+ + S EK S L + + D E T + L T+D + TN
Sbjct: 380 DVVIENGSESSFVNEKMNEASTAHLVAEQSVVDDSEIHLETEDQETLSPETAD--SSTNK 437
Query: 482 HSVFVQDEDKNENSGRVNQDLISSVDHQQQDALV 515
+S DE + N++++ +V+H + + V
Sbjct: 438 NSDEFPDEGSQSEASVNNEEVLENVEHVEDECTV 471
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 37.1 bits (82), Expect = 0.071
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 367 NEDINENSTECFLNEVLHEMSDICNPTNVE-IVFAQAEDINENSGRVNQDLISSVDHQQQ 425
+E+ ++S+E N + +E D+ N E IV ++ED+ E++ L + DH +
Sbjct: 321 SEEPTQSSSETEKN-LQNEKIDVEFIENSEAIVQNESEDVPESNSTSGTVLENIEDHLES 379
Query: 426 DAVV---NAKSVFREKFQRWSPKKLKTKSKISLDKE-KFTTCFVDDLPRATSDICNPTNA 481
D V+ + S EK S L + + D E T + L T+D + TN
Sbjct: 380 DVVIENGSESSFVNEKMNEASTAHLVAEQSVVDDSEIHLETEDQETLSPETAD--SSTNK 437
Query: 482 HSVFVQDEDKNENSGRVNQDLISSVDHQQQDALV 515
+S DE + N++++ +V+H + + V
Sbjct: 438 NSDEFPDEGSQSEASVNNEEVLENVEHVEDECTV 471
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 37.1 bits (82), Expect = 0.071
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 367 NEDINENSTECFLNEVLHEMSDICNPTNVE-IVFAQAEDINENSGRVNQDLISSVDHQQQ 425
+E+ ++S+E N + +E D+ N E IV ++ED+ E++ L + DH +
Sbjct: 321 SEEPTQSSSETEKN-LQNEKIDVEFIENSEAIVQNESEDVPESNSTSGTVLENIEDHLES 379
Query: 426 DAVV---NAKSVFREKFQRWSPKKLKTKSKISLDKE-KFTTCFVDDLPRATSDICNPTNA 481
D V+ + S EK S L + + D E T + L T+D + TN
Sbjct: 380 DVVIENGSESSFVNEKMNEASTAHLVAEQSVVDDSEIHLETEDQETLSPETAD--SSTNK 437
Query: 482 HSVFVQDEDKNENSGRVNQDLISSVDHQQQDALV 515
+S DE + N++++ +V+H + + V
Sbjct: 438 NSDEFPDEGSQSEASVNNEEVLENVEHVEDECTV 471
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 37.1 bits (82), Expect = 0.071
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 367 NEDINENSTECFLNEVLHEMSDICNPTNVE-IVFAQAEDINENSGRVNQDLISSVDHQQQ 425
+E+ ++S+E N + +E D+ N E IV ++ED+ E++ L + DH +
Sbjct: 321 SEEPTQSSSETEKN-LQNEKIDVEFIENSEAIVQNESEDVPESNSTSGTVLENIEDHLES 379
Query: 426 DAVV---NAKSVFREKFQRWSPKKLKTKSKISLDKE-KFTTCFVDDLPRATSDICNPTNA 481
D V+ + S EK S L + + D E T + L T+D + TN
Sbjct: 380 DVVIENGSESSFVNEKMNEASTAHLVAEQSVVDDSEIHLETEDQETLSPETAD--SSTNK 437
Query: 482 HSVFVQDEDKNENSGRVNQDLISSVDHQQQDALV 515
+S DE + N++++ +V+H + + V
Sbjct: 438 NSDEFPDEGSQSEASVNNEEVLENVEHVEDECTV 471
>Z81453-5|CAB03796.1| 294|Caenorhabditis elegans Hypothetical
protein B0250.8 protein.
Length = 294
Score = 33.9 bits (74), Expect = 0.66
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 56 WECEILLKRAVQLREQVQDSHRILQTNTKEIRFHETNGMLPSTRSLSILINVEGESDRDR 115
W+ E+ +R ++ R V+ + K IR + T +T + + N + E DR+
Sbjct: 49 WKAEVQEQRVIRGRTLVKGQQDAEEAEVKAIRENATRKQPATTEQVEEVEN-QKEKDREI 107
Query: 116 VKEKEMNFLTIHGFEMRVSVELQTQ 140
V +E F +H R S+++ Q
Sbjct: 108 VMNRERIFSLVHRNITRYSIQMPAQ 132
>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
protein F54C4.3 protein.
Length = 1145
Score = 33.5 bits (73), Expect = 0.88
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 488 DEDKNENSGRVNQDLISSVDHQQQDALVNVRSVPKRNSQHRSPKKLKTNSMKSLDKNKFT 547
DED E + +++ D ++Q+ LV+V V ++ QH P K+ + + K
Sbjct: 885 DEDP-EATAEGPSEIVEHDDEEEQEDLVDVEMVDDQHEQHEIPAKIPPHRQRLYQKLDPM 943
Query: 548 ACFISDLPCVVTRRIK 563
+LP +RRI+
Sbjct: 944 PVISHELPRSPSRRIR 959
>AF026202-1|AAZ82858.1| 755|Caenorhabditis elegans Histone
deacetylase protein 4 protein.
Length = 755
Score = 33.5 bits (73), Expect = 0.88
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 749 SPPRSKITNNKPTAISSNADCSGSPKASVDLKDIAKNEV-NQDLTSSVDHQQQDALVNAR 807
S P++ + PTA +SN C S + + K+ + N S + + +
Sbjct: 21 SVPQTPTKEHHPTAPTSNRKCDLPRSNSTTISQLTKDRLKNMIANRSKGESNSQSNLMSN 80
Query: 808 SVPKRNSQHRSPKKLKTNNIQIS 830
SV + H + +KLK +N Q++
Sbjct: 81 SVTANGNGHDNGRKLKNSNSQVN 103
>Z37139-5|CAA85490.1| 558|Caenorhabditis elegans Hypothetical
protein C14B1.9 protein.
Length = 558
Score = 31.9 bits (69), Expect = 2.7
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 373 NSTECFLN---EVLHEMSDICNPTNVEIVFAQAEDINENSGRVNQDLISSVDHQQQDAVV 429
NST C N + +H+ DI ++ +F+Q E + E G + + V++ + +
Sbjct: 174 NSTTCIANCYQDNIHKFCDIGEDNLLDTIFSQFEALQEQPGILG--YVKKVENNNKTGIS 231
Query: 430 NAKSVFREKFQRWSPKKLKTKSKISLDKEKFTTCFVDDLPRATSDICNPTNAHSVFVQDE 489
+ + K KISLDK K V A ++I + N+ V++E
Sbjct: 232 KLFGLMLPDGCNDKKMQFKIPKKISLDKPK----SVGSPSNAHNEIPSQKNSPKSAVKNE 287
Query: 490 DKNENS 495
E++
Sbjct: 288 TDTEDA 293
>Z99269-1|CAB16467.1| 1461|Caenorhabditis elegans Hypothetical
protein W10C6.1 protein.
Length = 1461
Score = 31.5 bits (68), Expect = 3.5
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 85 EIRFHETNGMLPSTRSLSILINVEGESDRDRVKEKEMNFLT 125
+IR H ML S+R + I N+ +++ D +KE + FLT
Sbjct: 601 DIRMHNVQLMLNSSRPILIATNILRKNEDDNMKELQDRFLT 641
>AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical
protein F57H12.4 protein.
Length = 454
Score = 31.1 bits (67), Expect = 4.7
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 1041 PNKFSGRNGDIETAFEDDDLNEYLQTEVSSPPSLKISNNKPTAISSN 1087
P+ FS R+G + T ++ L++ V++ +L+ S P A SSN
Sbjct: 354 PSFFSSRHGSVSTRLTREETTGMLRSRVATYENLQRSMEMPAAYSSN 400
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 403 EDINENSGRVNQDLISSVDHQQQDAVVNAKSVFR-EKFQRWSPKKLKTKSKISLDK 457
E NE Q L +D Q+Q A ++ S+ R Q WSP++ ++ S +LD+
Sbjct: 3547 EQQNEQLEMQLQRLKKVIDAQKQQAPLSTNSLLRGSHHQPWSPERARSGSASTLDR 3602
>Z81522-1|CAB61004.1| 264|Caenorhabditis elegans Hypothetical
protein F15D3.1b protein.
Length = 264
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 403 EDINENSGRVNQDLISSVDHQQQDAVVNAKSVFR-EKFQRWSPKKLKTKSKISLDK 457
E NE Q L +D Q+Q A ++ S+ R Q WSP++ ++ S +LD+
Sbjct: 137 EQQNEQLEMQLQRLKKVIDAQKQQAPLSTNSLLRGSHHQPWSPERARSGSASTLDR 192
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 403 EDINENSGRVNQDLISSVDHQQQDAVVNAKSVFR-EKFQRWSPKKLKTKSKISLDK 457
E NE Q L +D Q+Q A ++ S+ R Q WSP++ ++ S +LD+
Sbjct: 3547 EQQNEQLEMQLQRLKKVIDAQKQQAPLSTNSLLRGSHHQPWSPERARSGSASTLDR 3602
>Z70309-5|CAB54290.2| 402|Caenorhabditis elegans Hypothetical
protein R102.5b protein.
Length = 402
Score = 30.7 bits (66), Expect = 6.2
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 480 NAHSVFVQDEDKNENSGRVNQDLISSVDHQQQDALVNVRSVPKRNSQHRSPKKLKTNSMK 539
N+ V V D + E + R + L+S + Q Q A ++ ++ K NS H + K +
Sbjct: 128 NSSLVNVADVESTEIALRTSLLLVSELKSQLQAAKMSESTLLKSNSNHEIEENKKLSEKM 187
Query: 540 SLDKNKF 546
+ KN+F
Sbjct: 188 EVMKNEF 194
>Z70309-4|CAA94359.2| 388|Caenorhabditis elegans Hypothetical
protein R102.5a protein.
Length = 388
Score = 30.7 bits (66), Expect = 6.2
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 480 NAHSVFVQDEDKNENSGRVNQDLISSVDHQQQDALVNVRSVPKRNSQHRSPKKLKTNSMK 539
N+ V V D + E + R + L+S + Q Q A ++ ++ K NS H + K +
Sbjct: 128 NSSLVNVADVESTEIALRTSLLLVSELKSQLQAAKMSESTLLKSNSNHEIEENKKLSEKM 187
Query: 540 SLDKNKF 546
+ KN+F
Sbjct: 188 EVMKNEF 194
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 30.7 bits (66), Expect = 6.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 403 EDINENSGRVNQDLISSVDHQQQDAVVNAKSVFR-EKFQRWSPKKLKTKSKISLDK 457
E NE Q L +D Q+Q A ++ S+ R Q WSP++ ++ S +LD+
Sbjct: 3547 EQQNEQLEMQLQRLKKVIDAQKQQAPLSTNSLLRGSHHQPWSPERARSGSASTLDR 3602
>L14745-14|AAA27925.1| 142|Caenorhabditis elegans Hypothetical
protein C02F5.10 protein.
Length = 142
Score = 30.3 bits (65), Expect = 8.2
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Query: 486 VQDEDKNENSGRVNQDLISSVDHQQQDALVNVRSVPKRNSQHRSPKKLKTNSMKSLDKNK 545
+ D+DK E + + D L+NV++ P + S P + K K K
Sbjct: 40 ITDDDKGEQLPECTEGEWDASDEPFSAELLNVKNAPNKVSVFSGPYRSKETIEKI---KK 96
Query: 546 FTACFISDLPCVVTRRIKKRKNLQRAFVQVDDKNENS 582
F A +P + R K + + R F ++ D + S
Sbjct: 97 FRAAMPPVIPIIDERPDKLAQMMSRIFSEIIDGRDLS 133
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.128 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,842,693
Number of Sequences: 27539
Number of extensions: 1220301
Number of successful extensions: 3260
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3252
Number of HSP's gapped (non-prelim): 24
length of query: 1137
length of database: 12,573,161
effective HSP length: 89
effective length of query: 1048
effective length of database: 10,122,190
effective search space: 10608055120
effective search space used: 10608055120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 65 (30.3 bits)
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