BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001781-TA|BGIBMGA001781-PA|IPR012934|Zinc finger, AD-type (1137 letters) Database: bee 429 sequences; 140,377 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 3.5 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 4.6 AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 24 8.1 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 25.0 bits (52), Expect = 3.5 Identities = 15/81 (18%), Positives = 30/81 (37%) Query: 788 NQDLTSSVDHQQQDALVNARSVPKRNSQHRSPKKLKTNNIQISXXXXXXXXXXXXXETNG 847 N + + + +N+ + NS S +KLK + + + E N Sbjct: 326 NNPFSDVEERRVSKTAMNSNQIVSDNSLSSSEEKLKQDILNLRTDISSSSSSISSSEEND 385 Query: 848 FSGSKEDIETAFEDDDLNEYL 868 F K +E A ++ L ++ Sbjct: 386 FWQPKPTLEDAPQNSLLPNFV 406 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 24.6 bits (51), Expect = 4.6 Identities = 11/33 (33%), Positives = 19/33 (57%) Query: 350 EMSDICNPTNVEIVFVQNEDINENSTECFLNEV 382 E+S + P +VE++F+ N IN F ++V Sbjct: 609 ELSPLSVPDSVELLFINNNYINLVRPNTFTDKV 641 >AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase alpha 1 subunit protein. Length = 699 Score = 23.8 bits (49), Expect = 8.1 Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 301 NGNSTECFLNEVPHETSDICNPTDVQI 327 N T FLN+ H+ D+ P D+ I Sbjct: 660 NIEGTSYFLNDYKHKDVDVTLPLDLHI 686 Database: bee Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 140,377 Number of sequences in database: 429 Lambda K H 0.311 0.128 0.362 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 312,768 Number of Sequences: 429 Number of extensions: 13843 Number of successful extensions: 9 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 5 Number of HSP's gapped (non-prelim): 4 length of query: 1137 length of database: 140,377 effective HSP length: 65 effective length of query: 1072 effective length of database: 112,492 effective search space: 120591424 effective search space used: 120591424 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.8 bits) S2: 49 (23.8 bits)
- SilkBase 1999-2023 -