GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001780-TA|BGIBMGA001780-PA|IPR005829|Sugar transporter
superfamily, IPR007114|Major facilitator superfamily, IPR011701|Major
facilitator superfamily MFS_1
         (487 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   3.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   3.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   7.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   7.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/33 (24%), Positives = 19/33 (57%)

Query: 447 TSGSCLLILYFCLPETKDKTLQEIEDYFEGEEK 479
           +  S  L +  C P+ ++K +QE+++ F   ++
Sbjct: 355 SGSSFFLAVMGCHPDIQEKVIQELDEIFGDSDR 387


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 338 RSLLMTSGTTSVIFLCILSLYLY-LINLAFINESRF------VTIGLLVGFSLSVSIGPV 390
           RSL +   T S++ LC++SL  Y  I   F   S+       V I ++   S ++S   +
Sbjct: 123 RSLDVLFSTASILNLCVISLDRYWAITDPFTYPSKMSRRRAAVLIAIVWICSSAISFPAI 182

Query: 391 ILLISTHAELTPLKYKSHCMAVAAISYNIVSGTLLKMSPYIFLAF 435
           +   +   E  P   +  C     + Y I S T+    P   + F
Sbjct: 183 VWWRAVRTEEVP---EDKCPFTEHLGYLIFSSTISFYLPLFVMVF 224


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 36  PAWMLLFATGFSFGAPTVFIP 56
           PA+ + FA    F   T+F+P
Sbjct: 211 PAYNMTFAQNGPFNTTTIFVP 231


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/40 (30%), Positives = 16/40 (40%)

Query: 27   LLRQILITSPAWMLLFATGFSFGAPTVFIPQIRKEKNSTE 66
            L  QI + SP  +    TG      T+FI Q      S +
Sbjct: 1021 LASQIKLVSPGQIKSLLTGHGLQGQTIFIKQSPSSNQSQQ 1060


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.327    0.140    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,596
Number of Sequences: 429
Number of extensions: 5778
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39
Number of HSP's gapped (non-prelim): 4
length of query: 487
length of database: 140,377
effective HSP length: 60
effective length of query: 427
effective length of database: 114,637
effective search space: 48949999
effective search space used: 48949999
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 46 (22.6 bits)