BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001779-TA|BGIBMGA001779-PA|IPR007087|Zinc finger, C2H2-type (374 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 58 2e-09 SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 54 2e-08 SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 35 0.016 SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 34 0.037 SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 34 0.037 SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 33 0.065 SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 33 0.065 SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 31 0.20 SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 31 0.35 SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 30 0.61 SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 30 0.61 SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 29 1.1 SPBC428.18 |cdt1||replication licensing factor Cdt1|Schizosaccha... 28 1.9 SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 1.9 SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.5 SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ss... 28 2.5 SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 3.3 SPAC664.07c |rad9||checkpoint clamp complex protein Rad9|Schizos... 27 3.3 SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 27 3.3 SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr... 27 4.3 SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 27 4.3 SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 27 5.7 SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 26 7.5 SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 26 9.9 SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 26 9.9 SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 26 9.9 >SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual Length = 374 Score = 58.4 bits (135), Expect = 2e-09 Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 22/155 (14%) Query: 222 HRIRYQC--RSCRTRFGTKSKVLSHHAREHRANGKPVCV--PC--NRTFSSIATFKQHMK 275 H + Y C + C RF TK K+ +H R H C C + F + + H++ Sbjct: 140 HLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIR 199 Query: 276 MSMKHVPENDFNYMCSDCGNKFVNKTRLKDHI-----NWEHLKNYIHRCSDCKKSQAR-- 328 + HVP CS CG +F L+ H+ E K Y CKKS R Sbjct: 200 EA--HVPS------CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSS 251 Query: 329 -LHYHITALHNKETPYKCTTCSARFSWHSCLTRHV 362 L HI+ +H + C +C +F + L RH+ Sbjct: 252 ALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHL 286 Score = 54.4 bits (125), Expect = 2e-08 Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 11/140 (7%) Query: 237 TKSKVLSHHAREHRANGKPVCVPCNRTFSSIATF-KQHMKMSMK-HVPENDFNYMCSDCG 294 ++ +L H R H +N +P C+ T S A + K H+K+ + H F+ C Sbjct: 35 SRPSLLEQHLRTH-SNERPFV--CDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCD 91 Query: 295 NKFVNKTRLKDHINWEHL-KNYI---HRCSDCKKSQARLHYHITALHNKETPYKCT--TC 348 +F + L+ HI K Y C +C +L HI+A H PY CT C Sbjct: 92 AQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDC 151 Query: 349 SARFSWHSCLTRHVRTIHSK 368 RF+ L HV H K Sbjct: 152 ELRFATKQKLQNHVNRAHEK 171 Score = 34.3 bits (75), Expect = 0.028 Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 22/179 (12%) Query: 201 SCLVCECYFGTAAALSYHANKH------RIRYQC--RSCRTRFGTKSKVLSHHAREHRAN 252 SC +C F TAA L +H H R Y C C+ F S + H + H N Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264 Query: 253 GKPVCVPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKF--VNKTRLKDHINWE 310 C C F ++H++ + ++CG K + + D E Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPY---INECGIKHDGIEGVAIHDQKEKE 321 Query: 311 HLKNYIHRCSDCKKSQARLHYHITALHNKET-PYKCT--TCSARFSWHSCLTRHVRTIH 366 N + SD K ++ +T KE Y C+ C+ RF + RH+ + H Sbjct: 322 LSSNLV---SDVAK---KIINEVTGHGYKEAREYSCSFPECNYRFKRLYDMHRHLNSHH 374 >SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 681 Score = 54.4 bits (125), Expect = 2e-08 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 7/112 (6%) Query: 259 PCNRTFSSIATFKQHMKMSMKHVPENDF--NYMCS--DCGNKFVNKTRLKDHINWEHLKN 314 P +R+ +S+ K S K E+ NY+C+ C +F LK H+N H Sbjct: 539 PRSRSLNSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMN-THTNY 597 Query: 315 YIHRCSDCKKSQARLH--YHITALHNKETPYKCTTCSARFSWHSCLTRHVRT 364 +CS CKKS AR H LH + C TC+ RF+ L RH ++ Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649 Score = 32.7 bits (71), Expect = 0.086 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 3/73 (4%) Query: 205 CECYFGTAAALSYHANKH-RIR-YQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCNR 262 C F A L H N H R +QC C+ F + H + H CV CN+ Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDK-RRHEQLHTGIKAFACVTCNQ 635 Query: 263 TFSSIATFKQHMK 275 F+ + +H K Sbjct: 636 RFARMDALNRHYK 648 >SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 582 Score = 35.1 bits (77), Expect = 0.016 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 319 CSDCKKSQAR---LHYHITALHNKETPYKCTTCSARFSWHSCLTRHVR 363 C +C K R L HI +LH E P+ C C RFS L +H R Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHER 471 Score = 31.1 bits (67), Expect = 0.26 Identities = 11/28 (39%), Positives = 17/28 (60%) Query: 343 YKCTTCSARFSWHSCLTRHVRTIHSKEK 370 + C CS +F L RH+R++H+ EK Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEK 450 Score = 30.7 bits (66), Expect = 0.35 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 226 YQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCNRTFSSIATFKQHMKMSMKHVP 282 + C C +F +S+ L H R + KP C + FS +QH ++ + P Sbjct: 423 FVCPECSKKF-KRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHERLHVNASP 478 >SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces pombe|chr 1|||Manual Length = 533 Score = 33.9 bits (74), Expect = 0.037 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 315 YIHRCSDCKKSQAR---LHYHITALHNKETPYKCTTCSARFSWHSCLTRHVRTIH 366 Y+ + C K AR + HI H + PY+C C A F H L RH+R IH Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQT-HLSDRPYRCDLCKAGFVRHHDLKRHLR-IH 495 >SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 565 Score = 33.9 bits (74), Expect = 0.037 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Query: 317 HRCSDCKKSQARLHYHITAL--HNKETPYKCTT--CSARFSWHSCLTRHVRTIHS 367 ++C C K+ RL + + H E P+ CT C+ RFS LTRH R IH+ Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR-IHT 79 Score = 29.9 bits (64), Expect = 0.61 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Query: 342 PYKCTTCSARFSWHSCLTRHVRTIHSKEK 370 PYKC C+ F TRH+RT H+ EK Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRT-HTGEK 52 >SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 428 Score = 33.1 bits (72), Expect = 0.065 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 317 HRCSDCKKSQARLHYHITAL--HNKETPYKCT--TCSARFSWHSCLTRHVRT 364 + C CK+ R + + + H E P++C+ +C RF+ L RHVRT Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRT 55 >SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces pombe|chr 1|||Manual Length = 567 Score = 33.1 bits (72), Expect = 0.065 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 13/67 (19%) Query: 310 EHLKNYIHRCSDCKKSQARLHY---HITALHNKETPYKC-------TTCSARFSWHSCLT 359 + +K Y+ C C ++ ARL + HI + H E P+ C T C +FS L Sbjct: 65 QKVKQYV--CETCTRAFARLEHLKRHIRS-HTNEKPFTCSEIDGLPTGCGRQFSRRDLLL 121 Query: 360 RHVRTIH 366 RH + IH Sbjct: 122 RHQQKIH 128 Score = 27.9 bits (59), Expect = 2.5 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 256 VCVPCNRTFSSIATFKQHMKMSMKHVPE--NDFNYMCSDCGNKFVNKTRLKDH 306 VC C R F+ + K+H++ P ++ + + + CG +F + L H Sbjct: 71 VCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123 Score = 27.5 bits (58), Expect = 3.3 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Query: 339 KETPYKCTTCSARFSWHSCLTRHVRTIHSKEK 370 K Y C TC+ F+ L RH+R+ H+ EK Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRS-HTNEK 96 >SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 585 Score = 31.5 bits (68), Expect = 0.20 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 319 CSDCKKSQARLHYHIT---ALHNKETPYKCTTCSARFSWHSCLTRHVRTIHS 367 C C K R H ++T A H+K P C C + L RH++ H+ Sbjct: 33 CDQCAKRFTR-HENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83 Score = 29.1 bits (62), Expect = 1.1 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 335 ALHNKETPYKCTTCSARFSWHSCLTRHVRTIHSK 368 +L + + + C C+ RF+ H LTRH + HSK Sbjct: 23 SLIDSKRVFPCDQCAKRFTRHENLTRH-KACHSK 55 >SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 781 Score = 30.7 bits (66), Expect = 0.35 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Query: 323 KKSQARLHYHITALHNKETPYKCTTCSARFSWHSCLTRHVRTIHSKEKKSAT 374 +K AR H+ H + C CS+ F+ L RHV H K+ + + Sbjct: 30 RKEHARRHFRS---HTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQNDAGS 78 Score = 28.3 bits (60), Expect = 1.9 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 260 CNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLK 313 C ++F T K+H + + N ++C C + F L H+N +H+K Sbjct: 24 CTKSF----TRKEHARRHFRS-HTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72 >SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 249 Score = 29.9 bits (64), Expect = 0.61 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%) Query: 299 NKTRLKDHINWEHLKNYIHRCSDCKK------SQARLHYHITALHNKETPYKCTT--CSA 350 N + DHI K Y DC + S+ L H+ + H E P+ C+ C Sbjct: 58 NINSILDHIGNRRPK-YTCEWDDCPRKGMVQTSRFALVAHLRS-HTGEKPFICSVPECDR 115 Query: 351 RFSWHSCLTRHVRTIHSKE 369 F+ L +H+RT+H + Sbjct: 116 SFTRSDALAKHMRTVHEAD 134 >SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 463 Score = 29.9 bits (64), Expect = 0.61 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Query: 257 CVPCNRTFSSIATFKQHMKMSMK-HVPENDF 286 C+ C +FSS T K+HMK S ++PE ++ Sbjct: 210 CLFCAASFSSFDTCKKHMKASHSLYIPEREY 240 >SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces pombe|chr 2|||Manual Length = 897 Score = 29.1 bits (62), Expect = 1.1 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 321 DCKKSQARLHY--HITALHNKETPYKCTTCSARFSWHSCLTRHVRTIHSKEK 370 DC KS R + H + C+ C+ F+ L RHV+ +H +++ Sbjct: 32 DCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQ 83 Score = 27.5 bits (58), Expect = 3.3 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 10/78 (12%) Query: 240 KVLSHHAREHRANGKP--VCV--PCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGN 295 K L +R HR G P C C ++F T K+H++ + EN + CS C Sbjct: 10 KPLKKRSRAHRL-GDPRFYCTYPDCPKSF----TRKEHLRRH-ERTHENVKAFSCSFCNR 63 Query: 296 KFVNKTRLKDHINWEHLK 313 F L H+ HL+ Sbjct: 64 AFARSDVLNRHVQQMHLQ 81 Score = 26.2 bits (55), Expect = 7.5 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 6/70 (8%) Query: 211 TAAALSYHANKHRI---RYQCR--SCRTRFGTKSKVLSHHAREHRANGKPVCVPCNRTFS 265 T L + HR+ R+ C C F T+ + L H R H C CNR F+ Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSF-TRKEHLRRHERTHENVKAFSCSFCNRAFA 66 Query: 266 SIATFKQHMK 275 +H++ Sbjct: 67 RSDVLNRHVQ 76 >SPBC428.18 |cdt1||replication licensing factor Cdt1|Schizosaccharomyces pombe|chr 2|||Manual Length = 444 Score = 28.3 bits (60), Expect = 1.9 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 80 KEIELTESDIEAERDTEASSDSFVNALFKCEKCVEAFPNQEDLNDH-NLKKHNKSRSIQA 138 +E+ + +E + T + + N L C + + +N NLK H S S+Q Sbjct: 235 RELRIPTQTLEPKFTTNTAK--YANELVSCSMLDSSSTLSKSVNSKINLKSHQSSSSVQN 292 Query: 139 QSRLTADFEQHWRQS 153 SR + RQS Sbjct: 293 SSRKLTSSQLTLRQS 307 >SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 478 Score = 28.3 bits (60), Expect = 1.9 Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 104 NALFKCEKCVEAFPNQEDLNDHNLKKH 130 NA F+C+KC F Q L +H H Sbjct: 136 NATFRCDKCDMMFVKQSGLTNHKRTYH 162 Score = 26.6 bits (56), Expect = 5.7 Identities = 11/27 (40%), Positives = 13/27 (48%) Query: 343 YKCTTCSARFSWHSCLTRHVRTIHSKE 369 ++C C F S LT H RT H E Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYHQVE 165 >SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual Length = 500 Score = 27.9 bits (59), Expect = 2.5 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Query: 30 ETSEELDWHIAASEEKETPSDQQCSETETVVQPXXXXXXXXXXXRLMHLYKEIELTESDI 89 E+ EE + + E+KE+ SD + + + ++ K E E Sbjct: 145 ESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVE--KTEEKKEGSS 202 Query: 90 EAERDTEASSDS 101 E+ D+E+SSDS Sbjct: 203 ESSSDSESSSDS 214 >SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ssl1|Schizosaccharomyces pombe|chr 3|||Manual Length = 421 Score = 27.9 bits (59), Expect = 2.5 Identities = 11/43 (25%), Positives = 17/43 (39%) Query: 202 CLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSH 244 C C+ F + + +RY C SC+ F V +H Sbjct: 365 CFACQLPFPKPPVSPFDESTSSMRYACPSCKNHFCLDCDVFAH 407 >SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1628 Score = 27.5 bits (58), Expect = 3.3 Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 17/121 (14%) Query: 80 KEIELTESDIEAE--RDTEASSDSFVNALFKCEKCVEAFPNQEDLNDHNLKKHNKSRSIQ 137 ++I+ ++S + + RD S SF N E N ++ H ++ +++++ Sbjct: 1410 EDIQRSDSKLREDQSRDRTPQSRSFTN---------ENNDNLRSVSRHTRREPQQAQNLN 1460 Query: 138 AQSRLTADFEQHWRQSRSIQAQPRF----SADFEQHWPLQANLSTDNAHQMTRPPFSEGS 193 A+ + WRQ+ ++ PR S + + +AN T N ++ R +EG Sbjct: 1461 ARREHESQKSDRWRQNGNVNRNPRVSNNNSTNVSRERSSEANHRTSNDNK--RDEVTEGK 1518 Query: 194 D 194 D Sbjct: 1519 D 1519 >SPAC664.07c |rad9||checkpoint clamp complex protein Rad9|Schizosaccharomyces pombe|chr 1|||Manual Length = 426 Score = 27.5 bits (58), Expect = 3.3 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 287 NYMCSDCGNKFVNKTRLKDHINWEHLKNYIH-RCSDCKKS 325 N D F N +R+ D +NWE KN I C + +S Sbjct: 7 NVNLRDLARIFTNLSRIDDAVNWEINKNQIEITCLNSSRS 46 >SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 442 Score = 27.5 bits (58), Expect = 3.3 Identities = 12/43 (27%), Positives = 19/43 (44%) Query: 104 NALFKCEKCVEAFPNQEDLNDHNLKKHNKSRSIQAQSRLTADF 146 N ++CE C + + N L H H + QAQ + +F Sbjct: 396 NKPYRCEVCSKRYKNLNGLKYHRTHSHLQVSMAQAQREVQMNF 438 >SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 131 Score = 27.1 bits (57), Expect = 4.3 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 3/33 (9%) Query: 226 YQCRSCRTRFGTKSKVLSHHAREHRANGKPVCV 258 Y C C+T K +LSH ++R P C+ Sbjct: 14 YVCAKCKTHLAFKGHLLSH---DYRGKNGPACL 43 >SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|Schizosaccharomyces pombe|chr 3|||Manual Length = 957 Score = 27.1 bits (57), Expect = 4.3 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Query: 99 SDSFVNALFKCEKCVEAFPNQEDLNDHNLKKHNKSRSIQAQSRLTADFEQHWRQSRSIQA 158 S S V F+ C+ F Q NDH+L H +R QS L F+ +S + + Sbjct: 44 SSSKVLKYFRITGCLINFGKQP-ANDHHLWGHCGARLKHTQSDLIDRFKNANLKSVNEEN 102 Query: 159 QPRFSADFEQH 169 +F ++ E H Sbjct: 103 LKKFFSELENH 113 >SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosaccharomyces pombe|chr 2|||Manual Length = 2358 Score = 26.6 bits (56), Expect = 5.7 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Query: 37 WHIAASEEKETPSDQQCSETETVVQPXXXXXXXXXXXRLMHLYKEIELTESD 88 W + ++ + T D QCS + +VV P L++ ++E L ES+ Sbjct: 632 WILYTNQNRTTTLDYQCSSSNSVVSP---YASGLTLKNLIYPFEEYILQESN 680 >SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosaccharomyces pombe|chr 2|||Manual Length = 515 Score = 26.2 bits (55), Expect = 7.5 Identities = 14/58 (24%), Positives = 27/58 (46%) Query: 118 NQEDLNDHNLKKHNKSRSIQAQSRLTADFEQHWRQSRSIQAQPRFSADFEQHWPLQAN 175 N +DLN KH+ S + ++ + ++ ++ Q +P+ S DF P Q + Sbjct: 108 NLDDLNMSEEPKHHDSSNKESTNLDNSNMDESENQKNFKIEEPKPSGDFRNEGPKQCD 165 >SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|||Manual Length = 927 Score = 25.8 bits (54), Expect = 9.9 Identities = 10/23 (43%), Positives = 16/23 (69%) Query: 14 QSKLNTQNTLIINYDPETSEELD 36 + + + +N LII DPET+ +LD Sbjct: 439 KKRRDLRNELIITIDPETARDLD 461 >SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pombe|chr 2|||Manual Length = 355 Score = 25.8 bits (54), Expect = 9.9 Identities = 12/48 (25%), Positives = 19/48 (39%) Query: 292 DCGNKFVNKTRLKDHINWEHLKNYIHRCSDCKKSQARLHYHITALHNK 339 D N N TR + + W+ ++ C D + Q + Y H K Sbjct: 305 DVVNLTANPTRANEELKWKTSRSIYEICVDTWRWQQKYPYGFDLTHTK 352 >SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces pombe|chr 2|||Manual Length = 3131 Score = 25.8 bits (54), Expect = 9.9 Identities = 11/26 (42%), Positives = 17/26 (65%) Query: 26 NYDPETSEELDWHIAASEEKETPSDQ 51 ++ PE+SE LD H + + TPS+Q Sbjct: 785 DWRPESSESLDSHESEYKLNNTPSEQ 810 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.319 0.127 0.395 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,719,248 Number of Sequences: 5004 Number of extensions: 70740 Number of successful extensions: 308 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 254 Number of HSP's gapped (non-prelim): 52 length of query: 374 length of database: 2,362,478 effective HSP length: 74 effective length of query: 300 effective length of database: 1,992,182 effective search space: 597654600 effective search space used: 597654600 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 54 (25.8 bits)
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