Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001779-TA|BGIBMGA001779-PA|IPR007087|Zinc finger,
C2H2-type
(374 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 58 2e-09
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 54 2e-08
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 35 0.016
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 34 0.037
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 34 0.037
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 33 0.065
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 33 0.065
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 31 0.20
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 31 0.35
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 30 0.61
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 30 0.61
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 29 1.1
SPBC428.18 |cdt1||replication licensing factor Cdt1|Schizosaccha... 28 1.9
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 1.9
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.5
SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ss... 28 2.5
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 3.3
SPAC664.07c |rad9||checkpoint clamp complex protein Rad9|Schizos... 27 3.3
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 27 3.3
SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr... 27 4.3
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 27 4.3
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 27 5.7
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 26 7.5
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 26 9.9
SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces pomb... 26 9.9
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 26 9.9
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 58.4 bits (135), Expect = 2e-09
Identities = 44/155 (28%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Query: 222 HRIRYQC--RSCRTRFGTKSKVLSHHAREHRANGKPVCV--PC--NRTFSSIATFKQHMK 275
H + Y C + C RF TK K+ +H R H C C + F + + H++
Sbjct: 140 HLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIR 199
Query: 276 MSMKHVPENDFNYMCSDCGNKFVNKTRLKDHI-----NWEHLKNYIHRCSDCKKSQAR-- 328
+ HVP CS CG +F L+ H+ E K Y CKKS R
Sbjct: 200 EA--HVPS------CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSS 251
Query: 329 -LHYHITALHNKETPYKCTTCSARFSWHSCLTRHV 362
L HI+ +H + C +C +F + L RH+
Sbjct: 252 ALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHL 286
Score = 54.4 bits (125), Expect = 2e-08
Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
Query: 237 TKSKVLSHHAREHRANGKPVCVPCNRTFSSIATF-KQHMKMSMK-HVPENDFNYMCSDCG 294
++ +L H R H +N +P C+ T S A + K H+K+ + H F+ C
Sbjct: 35 SRPSLLEQHLRTH-SNERPFV--CDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCD 91
Query: 295 NKFVNKTRLKDHINWEHL-KNYI---HRCSDCKKSQARLHYHITALHNKETPYKCT--TC 348
+F + L+ HI K Y C +C +L HI+A H PY CT C
Sbjct: 92 AQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDC 151
Query: 349 SARFSWHSCLTRHVRTIHSK 368
RF+ L HV H K
Sbjct: 152 ELRFATKQKLQNHVNRAHEK 171
Score = 34.3 bits (75), Expect = 0.028
Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 22/179 (12%)
Query: 201 SCLVCECYFGTAAALSYHANKH------RIRYQC--RSCRTRFGTKSKVLSHHAREHRAN 252
SC +C F TAA L +H H R Y C C+ F S + H + H N
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 253 GKPVCVPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKF--VNKTRLKDHINWE 310
C C F ++H++ + ++CG K + + D E
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPY---INECGIKHDGIEGVAIHDQKEKE 321
Query: 311 HLKNYIHRCSDCKKSQARLHYHITALHNKET-PYKCT--TCSARFSWHSCLTRHVRTIH 366
N + SD K ++ +T KE Y C+ C+ RF + RH+ + H
Sbjct: 322 LSSNLV---SDVAK---KIINEVTGHGYKEAREYSCSFPECNYRFKRLYDMHRHLNSHH 374
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 54.4 bits (125), Expect = 2e-08
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 259 PCNRTFSSIATFKQHMKMSMKHVPENDF--NYMCS--DCGNKFVNKTRLKDHINWEHLKN 314
P +R+ +S+ K S K E+ NY+C+ C +F LK H+N H
Sbjct: 539 PRSRSLNSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMN-THTNY 597
Query: 315 YIHRCSDCKKSQARLH--YHITALHNKETPYKCTTCSARFSWHSCLTRHVRT 364
+CS CKKS AR H LH + C TC+ RF+ L RH ++
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
Score = 32.7 bits (71), Expect = 0.086
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 205 CECYFGTAAALSYHANKH-RIR-YQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCNR 262
C F A L H N H R +QC C+ F + H + H CV CN+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDK-RRHEQLHTGIKAFACVTCNQ 635
Query: 263 TFSSIATFKQHMK 275
F+ + +H K
Sbjct: 636 RFARMDALNRHYK 648
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 35.1 bits (77), Expect = 0.016
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 319 CSDCKKSQAR---LHYHITALHNKETPYKCTTCSARFSWHSCLTRHVR 363
C +C K R L HI +LH E P+ C C RFS L +H R
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHER 471
Score = 31.1 bits (67), Expect = 0.26
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 343 YKCTTCSARFSWHSCLTRHVRTIHSKEK 370
+ C CS +F L RH+R++H+ EK
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEK 450
Score = 30.7 bits (66), Expect = 0.35
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 226 YQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCNRTFSSIATFKQHMKMSMKHVP 282
+ C C +F +S+ L H R + KP C + FS +QH ++ + P
Sbjct: 423 FVCPECSKKF-KRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHERLHVNASP 478
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 33.9 bits (74), Expect = 0.037
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 315 YIHRCSDCKKSQAR---LHYHITALHNKETPYKCTTCSARFSWHSCLTRHVRTIH 366
Y+ + C K AR + HI H + PY+C C A F H L RH+R IH
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQT-HLSDRPYRCDLCKAGFVRHHDLKRHLR-IH 495
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 33.9 bits (74), Expect = 0.037
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 317 HRCSDCKKSQARLHYHITAL--HNKETPYKCTT--CSARFSWHSCLTRHVRTIHS 367
++C C K+ RL + + H E P+ CT C+ RFS LTRH R IH+
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR-IHT 79
Score = 29.9 bits (64), Expect = 0.61
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 342 PYKCTTCSARFSWHSCLTRHVRTIHSKEK 370
PYKC C+ F TRH+RT H+ EK
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRT-HTGEK 52
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 33.1 bits (72), Expect = 0.065
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 317 HRCSDCKKSQARLHYHITAL--HNKETPYKCT--TCSARFSWHSCLTRHVRT 364
+ C CK+ R + + + H E P++C+ +C RF+ L RHVRT
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRT 55
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 33.1 bits (72), Expect = 0.065
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Query: 310 EHLKNYIHRCSDCKKSQARLHY---HITALHNKETPYKC-------TTCSARFSWHSCLT 359
+ +K Y+ C C ++ ARL + HI + H E P+ C T C +FS L
Sbjct: 65 QKVKQYV--CETCTRAFARLEHLKRHIRS-HTNEKPFTCSEIDGLPTGCGRQFSRRDLLL 121
Query: 360 RHVRTIH 366
RH + IH
Sbjct: 122 RHQQKIH 128
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 256 VCVPCNRTFSSIATFKQHMKMSMKHVPE--NDFNYMCSDCGNKFVNKTRLKDH 306
VC C R F+ + K+H++ P ++ + + + CG +F + L H
Sbjct: 71 VCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 339 KETPYKCTTCSARFSWHSCLTRHVRTIHSKEK 370
K Y C TC+ F+ L RH+R+ H+ EK
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRS-HTNEK 96
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 31.5 bits (68), Expect = 0.20
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 319 CSDCKKSQARLHYHIT---ALHNKETPYKCTTCSARFSWHSCLTRHVRTIHS 367
C C K R H ++T A H+K P C C + L RH++ H+
Sbjct: 33 CDQCAKRFTR-HENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 335 ALHNKETPYKCTTCSARFSWHSCLTRHVRTIHSK 368
+L + + + C C+ RF+ H LTRH + HSK
Sbjct: 23 SLIDSKRVFPCDQCAKRFTRHENLTRH-KACHSK 55
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 30.7 bits (66), Expect = 0.35
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 323 KKSQARLHYHITALHNKETPYKCTTCSARFSWHSCLTRHVRTIHSKEKKSAT 374
+K AR H+ H + C CS+ F+ L RHV H K+ + +
Sbjct: 30 RKEHARRHFRS---HTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQNDAGS 78
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 260 CNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLK 313
C ++F T K+H + + N ++C C + F L H+N +H+K
Sbjct: 24 CTKSF----TRKEHARRHFRS-HTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK 72
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 29.9 bits (64), Expect = 0.61
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 299 NKTRLKDHINWEHLKNYIHRCSDCKK------SQARLHYHITALHNKETPYKCTT--CSA 350
N + DHI K Y DC + S+ L H+ + H E P+ C+ C
Sbjct: 58 NINSILDHIGNRRPK-YTCEWDDCPRKGMVQTSRFALVAHLRS-HTGEKPFICSVPECDR 115
Query: 351 RFSWHSCLTRHVRTIHSKE 369
F+ L +H+RT+H +
Sbjct: 116 SFTRSDALAKHMRTVHEAD 134
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 29.9 bits (64), Expect = 0.61
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 257 CVPCNRTFSSIATFKQHMKMSMK-HVPENDF 286
C+ C +FSS T K+HMK S ++PE ++
Sbjct: 210 CLFCAASFSSFDTCKKHMKASHSLYIPEREY 240
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 321 DCKKSQARLHY--HITALHNKETPYKCTTCSARFSWHSCLTRHVRTIHSKEK 370
DC KS R + H + C+ C+ F+ L RHV+ +H +++
Sbjct: 32 DCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQ 83
Score = 27.5 bits (58), Expect = 3.3
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 240 KVLSHHAREHRANGKP--VCV--PCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGN 295
K L +R HR G P C C ++F T K+H++ + EN + CS C
Sbjct: 10 KPLKKRSRAHRL-GDPRFYCTYPDCPKSF----TRKEHLRRH-ERTHENVKAFSCSFCNR 63
Query: 296 KFVNKTRLKDHINWEHLK 313
F L H+ HL+
Sbjct: 64 AFARSDVLNRHVQQMHLQ 81
Score = 26.2 bits (55), Expect = 7.5
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 211 TAAALSYHANKHRI---RYQCR--SCRTRFGTKSKVLSHHAREHRANGKPVCVPCNRTFS 265
T L + HR+ R+ C C F T+ + L H R H C CNR F+
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSF-TRKEHLRRHERTHENVKAFSCSFCNRAFA 66
Query: 266 SIATFKQHMK 275
+H++
Sbjct: 67 RSDVLNRHVQ 76
>SPBC428.18 |cdt1||replication licensing factor
Cdt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 444
Score = 28.3 bits (60), Expect = 1.9
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 80 KEIELTESDIEAERDTEASSDSFVNALFKCEKCVEAFPNQEDLNDH-NLKKHNKSRSIQA 138
+E+ + +E + T + + N L C + + +N NLK H S S+Q
Sbjct: 235 RELRIPTQTLEPKFTTNTAK--YANELVSCSMLDSSSTLSKSVNSKINLKSHQSSSSVQN 292
Query: 139 QSRLTADFEQHWRQS 153
SR + RQS
Sbjct: 293 SSRKLTSSQLTLRQS 307
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 104 NALFKCEKCVEAFPNQEDLNDHNLKKH 130
NA F+C+KC F Q L +H H
Sbjct: 136 NATFRCDKCDMMFVKQSGLTNHKRTYH 162
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 343 YKCTTCSARFSWHSCLTRHVRTIHSKE 369
++C C F S LT H RT H E
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTYHQVE 165
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 30 ETSEELDWHIAASEEKETPSDQQCSETETVVQPXXXXXXXXXXXRLMHLYKEIELTESDI 89
E+ EE + + E+KE+ SD + + + ++ K E E
Sbjct: 145 ESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVE--KTEEKKEGSS 202
Query: 90 EAERDTEASSDS 101
E+ D+E+SSDS
Sbjct: 203 ESSSDSESSSDS 214
>SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit
Ssl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 202 CLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSH 244
C C+ F + + +RY C SC+ F V +H
Sbjct: 365 CFACQLPFPKPPVSPFDESTSSMRYACPSCKNHFCLDCDVFAH 407
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 27.5 bits (58), Expect = 3.3
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 17/121 (14%)
Query: 80 KEIELTESDIEAE--RDTEASSDSFVNALFKCEKCVEAFPNQEDLNDHNLKKHNKSRSIQ 137
++I+ ++S + + RD S SF N E N ++ H ++ +++++
Sbjct: 1410 EDIQRSDSKLREDQSRDRTPQSRSFTN---------ENNDNLRSVSRHTRREPQQAQNLN 1460
Query: 138 AQSRLTADFEQHWRQSRSIQAQPRF----SADFEQHWPLQANLSTDNAHQMTRPPFSEGS 193
A+ + WRQ+ ++ PR S + + +AN T N ++ R +EG
Sbjct: 1461 ARREHESQKSDRWRQNGNVNRNPRVSNNNSTNVSRERSSEANHRTSNDNK--RDEVTEGK 1518
Query: 194 D 194
D
Sbjct: 1519 D 1519
>SPAC664.07c |rad9||checkpoint clamp complex protein
Rad9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 287 NYMCSDCGNKFVNKTRLKDHINWEHLKNYIH-RCSDCKKS 325
N D F N +R+ D +NWE KN I C + +S
Sbjct: 7 NVNLRDLARIFTNLSRIDDAVNWEINKNQIEITCLNSSRS 46
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 104 NALFKCEKCVEAFPNQEDLNDHNLKKHNKSRSIQAQSRLTADF 146
N ++CE C + + N L H H + QAQ + +F
Sbjct: 396 NKPYRCEVCSKRYKNLNGLKYHRTHSHLQVSMAQAQREVQMNF 438
>SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 27.1 bits (57), Expect = 4.3
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 226 YQCRSCRTRFGTKSKVLSHHAREHRANGKPVCV 258
Y C C+T K +LSH ++R P C+
Sbjct: 14 YVCAKCKTHLAFKGHLLSH---DYRGKNGPACL 43
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 27.1 bits (57), Expect = 4.3
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 99 SDSFVNALFKCEKCVEAFPNQEDLNDHNLKKHNKSRSIQAQSRLTADFEQHWRQSRSIQA 158
S S V F+ C+ F Q NDH+L H +R QS L F+ +S + +
Sbjct: 44 SSSKVLKYFRITGCLINFGKQP-ANDHHLWGHCGARLKHTQSDLIDRFKNANLKSVNEEN 102
Query: 159 QPRFSADFEQH 169
+F ++ E H
Sbjct: 103 LKKFFSELENH 113
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 37 WHIAASEEKETPSDQQCSETETVVQPXXXXXXXXXXXRLMHLYKEIELTESD 88
W + ++ + T D QCS + +VV P L++ ++E L ES+
Sbjct: 632 WILYTNQNRTTTLDYQCSSSNSVVSP---YASGLTLKNLIYPFEEYILQESN 680
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 118 NQEDLNDHNLKKHNKSRSIQAQSRLTADFEQHWRQSRSIQAQPRFSADFEQHWPLQAN 175
N +DLN KH+ S + ++ + ++ ++ Q +P+ S DF P Q +
Sbjct: 108 NLDDLNMSEEPKHHDSSNKESTNLDNSNMDESENQKNFKIEEPKPSGDFRNEGPKQCD 165
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 14 QSKLNTQNTLIINYDPETSEELD 36
+ + + +N LII DPET+ +LD
Sbjct: 439 KKRRDLRNELIITIDPETARDLD 461
>SPBC365.14c |||UDP-glucose 4-epimerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 292 DCGNKFVNKTRLKDHINWEHLKNYIHRCSDCKKSQARLHYHITALHNK 339
D N N TR + + W+ ++ C D + Q + Y H K
Sbjct: 305 DVVNLTANPTRANEELKWKTSRSIYEICVDTWRWQQKYPYGFDLTHTK 352
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 26 NYDPETSEELDWHIAASEEKETPSDQ 51
++ PE+SE LD H + + TPS+Q
Sbjct: 785 DWRPESSESLDSHESEYKLNNTPSEQ 810
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.127 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,719,248
Number of Sequences: 5004
Number of extensions: 70740
Number of successful extensions: 308
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 254
Number of HSP's gapped (non-prelim): 52
length of query: 374
length of database: 2,362,478
effective HSP length: 74
effective length of query: 300
effective length of database: 1,992,182
effective search space: 597654600
effective search space used: 597654600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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