Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001779-TA|BGIBMGA001779-PA|IPR007087|Zinc finger,
C2H2-type
(374 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 42 6e-04
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 42 0.001
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 38 0.017
09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419 33 0.28
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 33 0.28
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 33 0.49
03_06_0063 - 31391870-31392679 33 0.49
03_01_0343 - 2699518-2700114 31 1.5
02_05_1331 + 35736543-35736638,35737407-35737525,35737670-357377... 31 1.5
01_06_1280 - 35959452-35960105 31 1.5
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 31 2.0
11_08_0094 - 28314681-28314747,28315264-28315353,28315589-283157... 30 2.6
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 30 2.6
06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422 30 2.6
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 30 2.6
11_04_0142 + 14027726-14029081 30 3.5
07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392 30 3.5
05_03_0047 + 7793337-7793969 30 3.5
03_05_0796 + 27787401-27788831 30 3.5
09_04_0206 + 15607490-15607933 29 4.6
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 29 4.6
06_03_1159 + 28084786-28085428,28085520-28086166 29 4.6
06_03_0743 + 24069752-24070483,24071890-24072345 29 4.6
03_04_0188 - 18241815-18242477 29 4.6
03_02_0164 - 6066744-6067637 29 4.6
01_06_1614 - 38648495-38649706 29 4.6
01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010 29 4.6
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 29 6.1
01_06_0359 + 28722524-28722613,28722794-28722863,28723062-287231... 29 6.1
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 29 8.0
05_05_0022 + 21592403-21593083,21593720-21594208 29 8.0
03_04_0147 + 17690840-17691687,17692328-17692532,17693048-176931... 29 8.0
02_05_1277 - 35408097-35409080 29 8.0
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 42.3 bits (95), Expect = 6e-04
Identities = 42/145 (28%), Positives = 57/145 (39%), Gaps = 14/145 (9%)
Query: 205 CECYFGTAAALSYHANKHRIR-YQCR--SCRTRFGTKSKVLSHHAREHRANGKPVCVP-- 259
C F A AL HA+ H R Y C C +F SK L H H VC
Sbjct: 50 CGKTFVDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSK-LKRHFLIHTGEKNFVCPHEG 108
Query: 260 CNRT--FSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLKNYIH 317
C + FS K HMK H +N +C +F +++L+ HI +H K +
Sbjct: 109 CGKVLAFSLDFNLKAHMKT---HSVDNYHVCKYPECARRFTQESKLRAHIKQQHEKGGLQ 165
Query: 318 RCSDCKKSQARLHYHITALHNKETP 342
+++ L H HN TP
Sbjct: 166 NPGGSATNRSGLADH---SHNSHTP 187
Score = 36.7 bits (81), Expect = 0.030
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 260 CNRTFSSIATFKQHMKMSMKHVPENDFNYMC--SDCGNKFVNKTRLKDH-INWEHLKNYI 316
C +TF ++H HV + Y+C + C KF++ ++LK H + KN++
Sbjct: 50 CGKTFVDAGALRKHA-----HV-HGERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFV 103
Query: 317 HRCSDCKKSQA-RLHYHITA---LHNKETPYKCT--TCSARFSWHSCLTRHVRTIHSK 368
C K A L +++ A H+ + + C C+ RF+ S L H++ H K
Sbjct: 104 CPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQHEK 161
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 41.5 bits (93), Expect = 0.001
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 27/164 (16%)
Query: 219 ANKHRIRYQCRS--CRTRFGTKSKVLSHHAREHRANGKPV--CVP-CNRTFSSIATFKQH 273
A K ++ C+ C F SK+ H + + V C P C +TF+++ + H
Sbjct: 147 ATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLDYVEVVCCEPGCMKTFTNVECLRAH 206
Query: 274 MKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHI-------NWEHLKNYIHRCSDCKKSQ 326
+ ++V C CG K + K +K H+ + E +K C ++
Sbjct: 207 NQACHQYV-------QCDICGEKHLKKN-IKRHLRAHEEVPSTERIKCSFEGCECSFSNK 258
Query: 327 ARLHYHITALHNKETPYKC--TTCSARFSWHSCLTRHVRTIHSK 368
+ L HI A H++ P+ C T C F + +HVR H K
Sbjct: 259 SNLTKHIKASHDQVKPFACRFTGCEKVFPY-----KHVRDNHEK 297
Score = 41.1 bits (92), Expect = 0.001
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 35/199 (17%)
Query: 200 FSCLVCECYFGTAAALSYHANKHRIRYQCR-------SCRTRFGTKSKVLSHHAREH--- 249
F C + +C F H N+H +++Q + C +F K+ + H H
Sbjct: 88 FICPLEDCPFSYIR--KDHLNRHMLKHQGKLFTCSMDGCGRKFSIKANMQRHVKEIHEDE 145
Query: 250 ---RANGKPVCVP--CNRTFSSIATFKQHMKMSMKHVPENDFNYMCSD--CGNKFVNKTR 302
++N + VC CN+ F + K+H + HV + +C + C F N
Sbjct: 146 TATKSNRQFVCKEEGCNKVFKYASKMKKHEE---SHVKLDYVEVVCCEPGCMKTFTNVEC 202
Query: 303 LKDHINWEHLKNYIHRCSDC--KKSQARLHYHITALHNKETP----YKCTT--CSARFSW 354
L+ H H Y+ +C C K + + H+ A ++E P KC+ C FS
Sbjct: 203 LRAHNQACH--QYV-QCDICGEKHLKKNIKRHLRA--HEEVPSTERIKCSFEGCECSFSN 257
Query: 355 HSCLTRHVRTIHSKEKKSA 373
S LT+H++ H + K A
Sbjct: 258 KSNLTKHIKASHDQVKPFA 276
Score = 39.9 bits (89), Expect = 0.003
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 279 KHVPENDFNYMCSDCGNKFVNKTRLKDHI-NWEHLKNYIHRCSDCKKSQARL-HYHITAL 336
K V E D + C +CG F LK H+ + +++I DC S R H + L
Sbjct: 53 KVVHEGD--HTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHML 110
Query: 337 HNKETPYKCTT--CSARFSWHSCLTRHVRTIHSKE 369
++ + C+ C +FS + + RHV+ IH E
Sbjct: 111 KHQGKLFTCSMDGCGRKFSIKANMQRHVKEIHEDE 145
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 37.5 bits (83), Expect = 0.017
Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 27/192 (14%)
Query: 200 FSCLVCECYFGTAAALSYHANKHRIRYQ-----C--RSCRTRFGTKSKVLSHHAREHRAN 252
FSC V C F + H N+H + +Q C C +F K + H +E +
Sbjct: 287 FSCHVDGCPFSYSR--KDHLNRHLLTHQGKLFACPMEGCNRKFTIKGNI-QRHVQEMHKD 343
Query: 253 GKP-------VCVP--CNRTFSSIATFKQHMKMSMKHVPENDFNYMCSD--CGNKFVNKT 301
G P +C C +TF + ++H + HV + +C + C F N
Sbjct: 344 GSPCESKKEFICPEENCGKTFKYASKLQKHEE---SHVKLDYSEVICCEPGCMKAFTNLE 400
Query: 302 RLKDHINWEHLKNYIHRCS--DCKKSQAR-LHYHITALHNKETPYKCTTCSARFSWHSCL 358
LK H H C KK+ R H + + C FS S L
Sbjct: 401 CLKAHNKSCHRHVVCDVCGTKQLKKNFKRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNL 460
Query: 359 TRHVRTIHSKEK 370
+HV+ +H +++
Sbjct: 461 DKHVKAVHEQKR 472
Score = 29.5 bits (63), Expect = 4.6
Identities = 36/147 (24%), Positives = 52/147 (35%), Gaps = 14/147 (9%)
Query: 205 CECYFGTAAALSYHANKH-RIRYQ----CR-SCRTRFGTKSKVLSHHAREHRANGKPVCV 258
C F A+ L H H ++ Y C C F + +H+ HR VC
Sbjct: 360 CGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHNKSCHR---HVVCD 416
Query: 259 PCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLKNYIHR 318
C T FK+H +M DC F K+ L H+ H +
Sbjct: 417 VCG-TKQLKKNFKRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRPFV 475
Query: 319 C--SDCKKSQARLHYHITALHNKETPY 343
C S C KS + + H+ H K + +
Sbjct: 476 CGFSGCGKSFS--YKHVRDNHEKSSAH 500
>09_04_0154 - 15180921-15181811,15181986-15182070,15182205-15182419
Length = 396
Score = 33.5 bits (73), Expect = 0.28
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
Query: 215 LSYHANKHRIRYQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCNRTFSSIATFK--- 271
L+ + NK + C C+ + T+S+ L HH R R K + N S + T +
Sbjct: 282 LAKNPNKQPSEWVCSLCQAKCNTESQ-LEHHRRSTRHQQKVESLGWNAKESDLGTLQGMS 340
Query: 272 ------QHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINW-EHLK 313
+ +K+S + + Y C C K ++ L DH++ +H+K
Sbjct: 341 SDGSSSKSVKISAT-MDKQKATYFCEVCSLKCTSQRMLADHLSGKKHIK 388
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 33.5 bits (73), Expect = 0.28
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 277 SMKHVPENDFNYMCS--DCGNKFVNKTRLKDHINWEHLKNYIHRCSDCKK---SQARLHY 331
++K P + ++CS +CG FV+ L+ H + + + YI + C K ++L
Sbjct: 76 AVKPEPTTEILFLCSYENCGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKR 135
Query: 332 HITALHNKETPYKC--TTCSARFSWHSCLTRHVRTIHSKE 369
H +H + + C C FS L H++T H+ E
Sbjct: 136 H-HLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKT-HALE 173
Score = 31.9 bits (69), Expect = 0.86
Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 242 LSHHAREHRANGKPVCVP-CNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNK 300
L HA H P C + F + K+H + H + DF CG F
Sbjct: 104 LRKHAHVHNERQYICQEPGCGKKFVDSSKLKRH---HLIHTGQKDFICPHPGCGKAFSLD 160
Query: 301 TRLKDHINWEHLKNYIHRC--SDCKK---SQARLHYHITALHNKETP 342
L+ H+ L+NY H C C K S ++L H+ TP
Sbjct: 161 FNLRSHLKTHALENY-HVCPFPACGKRFTSDSKLKSHVKGHEKTGTP 206
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 32.7 bits (71), Expect = 0.49
Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 10/130 (7%)
Query: 195 VARLRFSCLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSHHAREHRANGK 254
VA RF C VC F L H H + ++ R + + +
Sbjct: 34 VATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRAAAVSAVTTAAPAPRKRVYVCPE 93
Query: 255 PVCVPCN--RTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINWEHL 312
P CV + R + K+H S KH + + C CG ++ + K H+
Sbjct: 94 PTCVHHDPARALGDLTGIKKH--FSRKH---GEKRWRCERCGKRYAVHSDWKAHVKNCGT 148
Query: 313 KNYIHRCSDC 322
+ Y RC DC
Sbjct: 149 REY--RC-DC 155
>03_06_0063 - 31391870-31392679
Length = 269
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 91 AERDTEASSDSFVNALFKCEKCVEAFPNQEDLNDHNLKKHN 131
A T ASSD N + +C C + FP + L H K ++
Sbjct: 150 ATSSTAASSDGMTNRVHRCSICQKEFPTGQALGGHKRKHYD 190
>03_01_0343 - 2699518-2700114
Length = 198
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 196 ARLRFSCLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSHHARE 248
AR + C+ C+ F TA AL H N HR R++ R+ +R T + S +R+
Sbjct: 24 ARPYYGCVFCKRGFTTAQALGGHMNIHR-RHRHRAMPSRRPTATGTTSMVSRD 75
>02_05_1331 +
35736543-35736638,35737407-35737525,35737670-35737715,
35738117-35738172,35738452-35738547,35738844-35738961,
35739406-35739672,35740023-35740124,35740302-35740659,
35740750-35740863,35741045-35741676,35741895-35742103,
35742597-35742819,35743419-35743538,35743888-35743914,
35744281-35745045,35745431-35748511
Length = 2142
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 256 VCVPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLKNY 315
+C+ + TF++ F QHM++ K++ + + M DC ++ V K L + +++ +N+
Sbjct: 276 LCLGDSHTFNT--HFSQHMEILYKYLKDKNHRSMALDCLHRLV-KFYLNVYADYQP-RNH 331
Query: 316 IHRCSDCKKSQ 326
+ C D SQ
Sbjct: 332 VWDCLDSVTSQ 342
>01_06_1280 - 35959452-35960105
Length = 217
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/62 (29%), Positives = 25/62 (40%)
Query: 202 CLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCN 261
C VC F AL H +HR + + T TK+ + A +G VC+ N
Sbjct: 124 CPVCGLEFPIGQALGGHMRRHRAEAEAAATTTTTTTKNGDVGKAAAVKACDGGGVCLDLN 183
Query: 262 RT 263
T
Sbjct: 184 LT 185
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 30.7 bits (66), Expect = 2.0
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 257 CVPCNRTFSSIATFKQHM-KMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLKNY 315
C C++ FS H ++ K V Y C+ C + F N+ L+ H+ +H Y
Sbjct: 465 CKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKHGAQY 524
Query: 316 IH-----RCSDCKKSQAR---LHYHITALHNKE 340
+ RC C + L HI + H+++
Sbjct: 525 LQYSTLLRCISCNSNFLNTDLLWQHIVSDHSRD 557
>11_08_0094 -
28314681-28314747,28315264-28315353,28315589-28315725,
28317020-28317589
Length = 287
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 200 FSCLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVP 259
++C C+ F +A AL H N HR R + R R R + S SH E A P
Sbjct: 53 YTCSFCQREFRSAQALGGHMNVHR-RDRAR-LRQRQTSSSSSPSHQEEEAEAPQDQQAGP 110
Query: 260 CNRTFSSIAT 269
+FS +T
Sbjct: 111 YYTSFSKPST 120
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 30.3 bits (65), Expect = 2.6
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 228 CRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCNRTFSSIATFKQHMKMSMKHVPENDFN 287
C C RF ++S + SH A EHR + V F ++ V EN
Sbjct: 57 CLFCSARFDSESSLFSHCASEHRFDFYRVVKETGMDFYGCIKLINFVR---SKVAEN--- 110
Query: 288 YMCSDCGNKFVNKTRLKDHIN 308
C CG F + + L H++
Sbjct: 111 -KCWSCGQVFSSNSELCGHLH 130
>06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422
Length = 241
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 309 WEHLKNYIHRCSDCKKSQAR-LHYHITALHNKETPYKCTT 347
+E K +I RC+ C+K ++ + A HN TPY+ T
Sbjct: 74 YEDTKEFIQRCARCQKHTSKNFLQELGAQHNIATPYRPQT 113
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 343 YKCTTCSARFSWHSCLTRHVRTIHSKEKKS 372
Y+C+ C FS H L HV H ++KKS
Sbjct: 463 YECSECHKTFSTHQALGGHV-AAHKRQKKS 491
>11_04_0142 + 14027726-14029081
Length = 451
Score = 29.9 bits (64), Expect = 3.5
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 179 DNAHQMTRPPFSEGSDVARLRFSCLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTK 238
DNA T P S G + S +V AAA + + + CR CR F T+
Sbjct: 73 DNA--ATAPAPSAGPVLTTSNGSAIVAIASAAAAAAAAASTMAREV-FACRICRKEFDTR 129
Query: 239 SKVLSHHAREHR 250
K + H R HR
Sbjct: 130 -KAVDGHMRVHR 140
>07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392
Length = 313
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 227 QCRSCRTRFGTKSKVLSHHAREHRANGK--------PVCVPCNRTFSSIATFKQHMK 275
QC C RF T ++ H + H++N + VC C++ F +H++
Sbjct: 248 QCVQCPARFSTVGALIEHCEKSHQSNSQSSRSRVTVDVCPKCSKAFRDPVLLVEHVE 304
>05_03_0047 + 7793337-7793969
Length = 210
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 174 ANLSTDNAHQMTRPPFSEG----SDVARLRFSCLVCECYFGTAAALSYHANKHR 223
++L TD+ H P S + AR + C+ C+ F TA AL H N HR
Sbjct: 18 SSLGTDD-HAAAAEPMSSSPPPATATARPYYECVFCKRGFTTAQALGGHMNIHR 70
>03_05_0796 + 27787401-27788831
Length = 476
Score = 29.9 bits (64), Expect = 3.5
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Query: 136 IQAQSRLTADFEQHWRQSRSIQAQPRFSADFEQHWPLQANLSTDNAHQMTRPPFSEGSDV 195
+QA++R F + Q QP + L+A+ A +E ++
Sbjct: 184 VQAKNRKRRRFVDGGEEQEP-QPQPPVRGKRSRGPDLEASEGLQTASAAAAAAAAEAAER 242
Query: 196 ARLRFSCLVCECYFGTAAALSYHANKHR 223
A RF C +C FG+ AL H H+
Sbjct: 243 ASKRFVCSICGRCFGSHQALGGHVLGHK 270
>09_04_0206 + 15607490-15607933
Length = 147
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 200 FSCLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSHHA 246
F C+ C+ F ++ AL H N H++ R R +++L+H A
Sbjct: 32 FFCMYCDRKFHSSQALGGHQNAHKLERSQAKLR-REAIAAEILAHRA 77
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 29.5 bits (63), Expect = 4.6
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 17/135 (12%)
Query: 190 SEGSDVARLRFSCLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSHHAREH 249
S G+ +A RF C VC F L H H + ++ R + + R
Sbjct: 49 SPGTLLATNRFVCEVCGKGFQRDQNLQLHRRGHNLPWRLRQ-------RGPGAAPPRRRV 101
Query: 250 RANGKPVCVPCN--RTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHI 307
+P CV N R + K+H KH + + C CG ++ + LK H
Sbjct: 102 YVCPEPGCVHHNPTRALGDLTGIKKH--FCRKH---GEKRWTCQRCGKRYAVQADLKAHT 156
Query: 308 NWEHLKNYIHRCSDC 322
+ Y RC DC
Sbjct: 157 KTCGTREY--RC-DC 168
>06_03_1159 + 28084786-28085428,28085520-28086166
Length = 429
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 86 ESDIEAERDTEASSDSFVNALFKCEKCVEAFPNQEDLNDHNLKKHNKSRSIQAQS 140
+ D AE + A + + +C +C + F N + L H+ +H + ++ S
Sbjct: 169 DDDDNAEAPSPAPARASCEVGIRCHRCGDRFANHDALESHHHSRHAVTELVEGDS 223
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 243 SHHAREHRANGKP-VCVPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKT 301
+H+ R+H KP +C C + F+ ++ H K K + C+ CG+ F +K
Sbjct: 301 THYKRKHGI--KPFMCRKCGKAFAVRGDWRTHEKNCGKL-------WYCA-CGSDFKHKR 350
Query: 302 RLKDHI 307
LKDHI
Sbjct: 351 SLKDHI 356
>03_04_0188 - 18241815-18242477
Length = 220
Score = 29.5 bits (63), Expect = 4.6
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 226 YQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCNRTFSSIATFKQHMKMSMKHVPEN 284
++C CR F T + L H R H +G V V + + S+ ++ ++ +++ +PE+
Sbjct: 135 HRCTICRRSFAT-GQALGGHKRCHYWDGTSVSVSVSASASAASSAVRNFDLNLMPLPES 192
>03_02_0164 - 6066744-6067637
Length = 297
Score = 29.5 bits (63), Expect = 4.6
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 7/82 (8%)
Query: 180 NAHQMTRPPFSEGSDVARLRFSCLVCECYFGTAAALSYHANKHR------IRYQCRSCRT 233
+ H + +D +R +F C C +F T+ AL H N H+ R Q ++
Sbjct: 82 STHGAAAAAIAAAADSSR-KFECHYCCRHFPTSQALGGHQNAHKRERQHAKRVQMQTAMA 140
Query: 234 RFGTKSKVLSHHAREHRANGKP 255
+ HH H+ G P
Sbjct: 141 AAAAAASGAHHHHHHHQLLGYP 162
>01_06_1614 - 38648495-38649706
Length = 403
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 173 QANLSTDNAHQMTRPPFSEGSDVARLRFSCLVCECYFGTAAALSYHANKHR 223
+ +S D+ + + + VAR+ F C VC FG+ A+ H H+
Sbjct: 78 EGTISDDHGDGIAGAAAAADAPVARVAFPCHVCSKEFGSRKAVHGHMRVHQ 128
>01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010
Length = 613
Score = 29.5 bits (63), Expect = 4.6
Identities = 43/194 (22%), Positives = 69/194 (35%), Gaps = 25/194 (12%)
Query: 196 ARLRFSCLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSHHAR---EHRAN 252
A R SC VC+ + A K + + + RS K +L H +
Sbjct: 47 AMCRLSCSVCDSNKEEEEERTGKAAKAKRKSKIRSVDQ---LKGHLLDRHGLYMCDLCLE 103
Query: 253 GKPVCVPCNRTFSSIATFKQHMKMSMKHVPENDFNY-------MCSDCGNKFVNKTRLKD 305
G+ V + C + +++ QH+K V ++ MC C + F L
Sbjct: 104 GRKVFI-CEQKLYTMSQLNQHIKSGDSEVDGSEVERRGFGGHPMCEFCKSPFYGDNELYT 162
Query: 306 HINWEHLKNYIHRCSDCKKSQARLH---YHITALHNKETPYKCTTCSARFSW---HSCLT 359
H+ EH C C++ ARL Y + HN + S ++ + + L
Sbjct: 163 HMTREHFS-----CHICQRYSARLQSLSYLVRQQHNADFVIVNRQHSGQYDYFRNYDDLE 217
Query: 360 RHVRTIHSKEKKSA 373
RH H K A
Sbjct: 218 RHNGVEHGKHMPGA 231
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 29.1 bits (62), Expect = 6.1
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 311 HLKNY--IHRCSDCKKSQARLHYHITALHNKETPYKC--TTCSARFSW 354
H KN + C +S L H ++HN + PYKC CS F W
Sbjct: 560 HKKNTCTVKSCGRHFRSHKYLRRH-QSIHNDDMPYKCPWEGCSMAFKW 606
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 336 LHNKETPYKCTT--CSARFSWHSCLTRHVR 363
+H + PYKCTT CS + + S TRH R
Sbjct: 616 VHAGKRPYKCTTPGCSKIYKFVSDFTRHKR 645
>01_06_0359 +
28722524-28722613,28722794-28722863,28723062-28723159,
28724029-28724167,28724243-28724370,28724500-28724592,
28724707-28724757,28725405-28725470,28725568-28725633,
28725900-28725977,28726248-28726427,28726502-28726577,
28726660-28726823,28727569-28727931
Length = 553
Score = 29.1 bits (62), Expect = 6.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 23 LIINYDPETSEELDWHIAASEEKETPSDQQCSETETVVQP 62
L++ Y PE SEE+ ++A EEK + + T V P
Sbjct: 299 LLLTYKPEESEEIPEPVSAEEEKPQIEEPAVAVPSTEVVP 338
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 28.7 bits (61), Expect = 8.0
Identities = 47/231 (20%), Positives = 83/231 (35%), Gaps = 21/231 (9%)
Query: 91 AERDTEASSDSFVNALFKCEKCVEAFPNQEDLNDH-NLKKHNKS-----RSIQAQSRLTA 144
+E+ A S + + C C ++ +L DH +KH ++ +A +R TA
Sbjct: 95 SEKSEPAVQKSMPPSAWSCAVCQVRTTSERNLRDHCGGQKHQSKVAALEKTTKAMARTTA 154
Query: 145 D----FEQHWRQSRSIQAQPRFSADFEQHWP---LQANLST--DNAHQMTRPPFSEGSDV 195
W S DF+ H QAN + + + P S+G+
Sbjct: 155 KPSPGAAARWGCS-ICNISCNGECDFDTHLKGKKHQANTQALLEQNKKSSVNPESQGTKA 213
Query: 196 ARLRFSCLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKVLSHHAREHRANGKP 255
A C VC+ F + L H + + R+ + + + S + K
Sbjct: 214 AAATLICRVCQAKFTCQSDLQSHLKVMKHQLNLRAPSSDGSSFTSATSESLSLELYSCKV 273
Query: 256 VCVPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDH 306
V C TF + + H+ KH+ + + C C + ++ L DH
Sbjct: 274 CSVKC--TFERMLAY--HL-TGKKHLKQENLQLSCEICKLQCNSEKVLSDH 319
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 28.7 bits (61), Expect = 8.0
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Query: 243 SHHAREHRANGKP-VCVPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKT 301
+H+ R+H A KP C C + F+ ++ H K K + C+ CG+ F +K
Sbjct: 287 THYKRKHGA--KPFACRRCAKPFAVKGDWRTHEKNCGKR-------WFCA-CGSDFKHKR 336
Query: 302 RLKDHI 307
L DH+
Sbjct: 337 SLNDHV 342
>03_04_0147 +
17690840-17691687,17692328-17692532,17693048-17693199,
17693306-17693597,17693807-17693962,17694561-17694764,
17694875-17694987,17695078-17695192,17695293-17695382,
17695463-17695666,17695764-17695859,17696094-17696216,
17696308-17696400,17696477-17696641,17697179-17697268,
17697356-17697520
Length = 1036
Score = 28.7 bits (61), Expect = 8.0
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 97 ASSDSFVNA----LFKCEKCVEAFPNQEDLNDHNLKKHNKSRSIQAQSRLTADFEQ--HW 150
ASS FVN L CE ++ +++D D N N + + + A E+ W
Sbjct: 358 ASSGMFVNLSAVMLRLCEPFLDRMESKKDKIDVNYLFCNDRIDFKNLTAINASSEEVSSW 417
Query: 151 RQSRSIQAQPRFSADFEQHWPLQANLSTDNAHQMTRPPFSEGSDVARL----RFSCLVCE 206
++R + SA E + +++ +T + + T S+G + FS +CE
Sbjct: 418 IENRGYE-HAEDSASGEARF-VESQEATSSGNNSTVSLSSKGGSLVNCSKKENFS-FICE 474
Query: 207 CYFGTAAALS 216
C+F TA L+
Sbjct: 475 CFFMTARVLN 484
>02_05_1277 - 35408097-35409080
Length = 327
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 192 GSDVARLRF-SCLVCECYFGTAAALSYHANKHR 223
GS + +LR C +C FG+ AL H +HR
Sbjct: 206 GSIINKLRVHECSICGAEFGSGQALGGHMRRHR 238
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.127 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,473,495
Number of Sequences: 37544
Number of extensions: 413668
Number of successful extensions: 1254
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1191
Number of HSP's gapped (non-prelim): 91
length of query: 374
length of database: 14,793,348
effective HSP length: 83
effective length of query: 291
effective length of database: 11,677,196
effective search space: 3398064036
effective search space used: 3398064036
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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