BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001779-TA|BGIBMGA001779-PA|IPR007087|Zinc finger,
C2H2-type
(374 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 70 4e-14
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 45 9e-07
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 39 6e-05
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 33 0.003
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 32 0.007
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 30 0.028
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 29 0.085
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 26 0.46
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 26 0.60
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 23 3.2
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 4.2
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 9.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 9.8
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 69.7 bits (163), Expect = 4e-14
Identities = 48/150 (32%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 226 YQCRSCRTRFGTKSKVLSHHAREHRANGKPV--CVPCNRTFSSIATFKQHMKMSMKHVPE 283
YQC C+ F K+ SH R H G+ C C +TF+ A +H + P
Sbjct: 62 YQCLLCQKAFDQKNLYQSH-LRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKP- 119
Query: 284 NDFNYMCSDCGNKFVNKTRLKDHINWEHLKNYIHRCSDCKKS---QARLHYHITALHNKE 340
Y C C F K L H H K ++C C+++ +LH H+ +H E
Sbjct: 120 ----YQCEYCSKSFSVKENLSVHRRI-HTKERPYKCDVCERAFEHSGKLHRHMR-IHTGE 173
Query: 341 TPYKCTTCSARFSWHSCLTRHVRTIHSKEK 370
P+KCT CS F L H+RT H+ EK
Sbjct: 174 RPHKCTVCSKTFIQSGQLVIHMRT-HTGEK 202
Score = 66.5 bits (155), Expect = 3e-13
Identities = 50/176 (28%), Positives = 66/176 (37%), Gaps = 14/176 (7%)
Query: 200 FSCLVCECYFGTAAALSYHANKHRIR--YQCRSCRTRFGTKSKVLSHHAREHRANGKPVC 257
+ C +C F A L+ H H YQC C F K LS H R H C
Sbjct: 92 YRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKEN-LSVHRRIHTKERPYKC 150
Query: 258 VPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLKNYIH 317
C R F +HM++ H E + C+ C F+ +L H+ H +
Sbjct: 151 DVCERAFEHSGKLHRHMRI---HTGERP--HKCTVCSKTFIQSGQLVIHMR-THTGEKPY 204
Query: 318 RCSDCKKS---QARLHYHITALHNKETPYKCTTCSARFSWHSCLTRHVRTIHSKEK 370
C C K +L H T H E PY C C F ++ L H + H EK
Sbjct: 205 VCKACGKGFTCSKQLKVH-TRTHTGEKPYTCDICGKSFGYNHVLKLH-QVAHYGEK 258
Score = 65.7 bits (153), Expect = 6e-13
Identities = 51/173 (29%), Positives = 62/173 (35%), Gaps = 14/173 (8%)
Query: 200 FSCLVCECYFGTAAALSYHANKHRIR--YQCRSCRTRFGTKSKVLSHHAREHRANGKPVC 257
+ C C F LS H H Y+C C F K L H R H C
Sbjct: 120 YQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGK-LHRHMRIHTGERPHKC 178
Query: 258 VPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLKNYIH 317
C++TF HM+ P Y+C CG F +LK H H +
Sbjct: 179 TVCSKTFIQSGQLVIHMRTHTGEKP-----YVCKACGKGFTCSKQLKVHTR-THTGEKPY 232
Query: 318 RCSDCKKSQARLHY---HITALHNKETPYKCTTCSARFSWHSCLTRHVRTIHS 367
C C KS H H A H E YKCT C F + H++T HS
Sbjct: 233 TCDICGKSFGYNHVLKLHQVA-HYGEKVYKCTLCHETFGSKKTMELHIKT-HS 283
Score = 38.3 bits (85), Expect = 1e-04
Identities = 38/171 (22%), Positives = 61/171 (35%), Gaps = 12/171 (7%)
Query: 107 FKCEKCVEAFPNQEDLNDHNLKKHNKSRSIQAQSRLTADFEQHWRQSRSIQAQPRFSADF 166
++CE C ++F +E+L+ H + H K R + E+ + S + R
Sbjct: 120 YQCEYCSKSFSVKENLSVHR-RIHTKERPYKCDV-----CERAFEHSGKLHRHMRIHTGE 173
Query: 167 EQHWPLQANLSTDNAHQMTRPPFSEGSDVARLRFSCLVCECYFGTAAALSYHANKH--RI 224
H + + + Q + + + C C F + L H H
Sbjct: 174 RPH---KCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEK 230
Query: 225 RYQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCNRTFSSIATFKQHMK 275
Y C C FG + VL H H C C+ TF S T + H+K
Sbjct: 231 PYTCDICGKSFG-YNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIK 280
Score = 23.8 bits (49), Expect = 2.4
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 334 TALHN-KETPYKCTTCSARFSWHSCLTRHVRTIHSKE 369
T L N +E Y+C C F + H+R+ H KE
Sbjct: 52 TPLTNIEEKTYQCLLCQKAFDQKNLYQSHLRS-HGKE 87
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 45.2 bits (102), Expect = 9e-07
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 182 HQMTRPPFSEGSDVARLRFSCLVCECYFGTAAALSYHANKHRIRYQCRSCRTRFGTKSKV 241
HQ +EG A+ FSC CE + + AL H H + +C C F ++ +
Sbjct: 1 HQQFHCAAAEGQ--AKKSFSCKYCEKVYVSLGALKMHIRTHTLPCKCHLCGKAF-SRPWL 57
Query: 242 LSHHAREHRANGKPVCVPCNRTFS 265
L H R H C CNR F+
Sbjct: 58 LQGHIRTHTGEKPFSCQHCNRAFA 81
Score = 33.9 bits (74), Expect = 0.002
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 287 NYMCSDCGNKFVNKTRLKDHINWEHLKNYIHRCSDCKKSQARLHYHITALHNKETPYKCT 346
++ C C +V+ LK HI L H C L HI H E P+ C
Sbjct: 16 SFSCKYCEKVYVSLGALKMHIRTHTLPCKCHLCGKAFSRPWLLQGHIRT-HTGEKPFSCQ 74
Query: 347 TCSARFS 353
C+ F+
Sbjct: 75 HCNRAFA 81
Score = 27.9 bits (59), Expect = 0.15
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 319 CSDCKKSQARLHYHITALHNKETPYKCTTCSARFSWHSCLTRHVRTIHSKEK 370
C C+K L + P KC C FS L H+RT H+ EK
Sbjct: 19 CKYCEKVYVSLGALKMHIRTHTLPCKCHLCGKAFSRPWLLQGHIRT-HTGEK 69
Score = 25.0 bits (52), Expect = 1.1
Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 8/82 (9%)
Query: 246 AREHRANGKPVCVPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKD 305
A E +A C C + + S+ K H++ + C CG F L+
Sbjct: 8 AAEGQAKKSFSCKYCEKVYVSLGALKMHIR-------THTLPCKCHLCGKAFSRPWLLQG 60
Query: 306 HINWEHLKNYIHRCSDCKKSQA 327
HI H C C ++ A
Sbjct: 61 HIR-THTGEKPFSCQHCNRAFA 81
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 39.1 bits (87), Expect = 6e-05
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 280 HVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLKNYIHRCSDCKKS---QARLHYHITAL 336
H E F C +C +F LK H+ H + CS C + A L H+ +
Sbjct: 4 HTGEKPFE--CPECHKRFTRDHHLKTHMRL-HTGEKPYHCSHCDRQFVQVANLRRHLR-V 59
Query: 337 HNKETPYKCTTCSAR 351
H E PY C C+A+
Sbjct: 60 HTGERPYACELCAAK 74
Score = 38.3 bits (85), Expect = 1e-04
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 319 CSDCKKSQARLHYHIT--ALHNKETPYKCTTCSARFSWHSCLTRHVRTIHSKEKKSA 373
C +C K R H+ T LH E PY C+ C +F + L RH+R +H+ E+ A
Sbjct: 12 CPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLR-VHTGERPYA 67
Score = 37.5 bits (83), Expect = 2e-04
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 226 YQCRSCRTRFGTKSKVLSHHAREHRANGKPVCVPCNRTFSSIATFKQHMKMSMKHVPEND 285
++C C RF T+ L H R H C C+R F +A ++H+++ H E
Sbjct: 10 FECPECHKRF-TRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRV---HTGERP 65
Query: 286 FNYMCSDCGNK 296
Y C C K
Sbjct: 66 --YACELCAAK 74
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 6/76 (7%)
Query: 247 REHRANGKPVCVPCNRTFSSIATFKQHMKMSMKHVPENDFNYMCSDCGNKFVNKTRLKDH 306
R H C C++ F+ K HM++ P Y CS C +FV L+ H
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKP-----YHCSHCDRQFVQVANLRRH 56
Query: 307 INWEHLKNYIHRCSDC 322
+ H + C C
Sbjct: 57 LR-VHTGERPYACELC 71
Score = 29.5 bits (63), Expect = 0.049
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 337 HNKETPYKCTTCSARFSWHSCLTRHVRTIHSKEK 370
H E P++C C RF+ L H+R +H+ EK
Sbjct: 4 HTGEKPFECPECHKRFTRDHHLKTHMR-LHTGEK 36
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 271 KQHMKMSMK-HVPENDFNYMCSDCGNKFVNKTRLKDHINWEHLKNYIHRCSDCKKSQARL 329
K H++ ++ H F C C VNK+ L H+ H Y +RC++C + A
Sbjct: 1 KHHLEYHLRNHFGSKPFK--CEKCSYSCVNKSMLNSHLK-SHSNVYQYRCANC--TYATK 55
Query: 330 HYHITALH 337
+ H LH
Sbjct: 56 YCHSLKLH 63
Score = 28.7 bits (61), Expect = 0.085
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 107 FKCEKCVEAFPNQEDLNDHNLKKHN 131
FKCEKC + N+ LN H LK H+
Sbjct: 17 FKCEKCSYSCVNKSMLNSH-LKSHS 40
Score = 24.6 bits (51), Expect = 1.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 329 LHYHITALHNKETPYKCTTCSARFSWHSCLTRHVRTIHS 367
L YH+ H P+KC CS S L H+++ HS
Sbjct: 4 LEYHLRN-HFGSKPFKCEKCSYSCVNKSMLNSHLKS-HS 40
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 32.3 bits (70), Expect = 0.007
Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 226 YQCRSCRTRFGTKSKVLSHHAREH-RANGKPVCVPCNRTFSSIATFKQHMKMSMKHVPEN 284
++C C + +++ H H R + +P+C C R +SS+ + + H + + +N
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSKN 62
Query: 285 D 285
+
Sbjct: 63 E 63
Score = 24.6 bits (51), Expect = 1.4
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 288 YMCSDCGNKFVNKTRLKDHINWEHLK-NYIHRCSDCKKSQARLHYHITALHNKETPY 343
+ C C + TRL+ HI H + + C+ CK R++ + +L N ++ Y
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICK----RVYSSLNSLRNHKSIY 55
Score = 23.8 bits (49), Expect = 2.4
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 343 YKCTTCSARFSWHSCLTRHVRTIHSKEKK 371
++C C+ + + L RH++ +H++ K
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSK 31
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 30.3 bits (65), Expect = 0.028
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 202 CLVCECYFGTAAALSYH-ANKHR---IRYQCRSCRTRFGTKSKVLSHHAREHRAN 252
C C F +L H +KH Y C C R+ TK+ + +H + +HR +
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGS 62
Score = 23.8 bits (49), Expect = 2.4
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 314 NYIHRCSDCKKSQA---RLHYHITALHNK-ETPYKCTTCSARFSWHSCLTRHVRTIH 366
N C C+++ + L H H + +T Y C C+ R+ + LT H H
Sbjct: 3 NEPQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 28.7 bits (61), Expect = 0.085
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 319 CSDCKKSQARLHYHITALH-NKETPYKCTTCSARFSWHSCLTRHVRTIH 366
C S+A L H+ H ++ Y+C C + + L H+ T H
Sbjct: 11 CGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
Score = 27.1 bits (57), Expect = 0.26
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 288 YMCSDCGNKFVNKTRLKDHINWEHL-KNYIHRCSDCKK---SQARLHYHITALH 337
+ C CG +K LK H+ +H + +RC C++ S+ L HI H
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 26.2 bits (55), Expect = 0.46
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Query: 133 SRSIQAQSRLTADFEQHWRQSRSIQAQPRFSADFEQHWPLQANLSTDNAHQMTRPPFSEG 192
+R+ + S L +D EQH+RQ R + + H AN ++ + + +R +
Sbjct: 711 TRNSEMFSSLLSDTEQHFRQHRDSLSPRVENRSAIVHSEASANANSSTSSEESREEKATT 770
Query: 193 SDVARLRFSCLVCECYFGTAAALSYH---ANKHRIRYQCRSCRTRFGTKSKVLSH 244
S A R CE AA S+H N + +Q + C TKS H
Sbjct: 771 SLEAEKREKSEHCEKGKEYYAA-SFHTDIGNSQSLAHQDQCCPGFTMTKSGKTRH 824
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 25.8 bits (54), Expect = 0.60
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 115 AFPNQEDLNDHNLKKHNKSRSIQAQSRLTADF-EQHWRQSRSIQAQPRFSADFEQHWPLQ 173
AF E ++ ++ + Q Q + A +Q +Q + Q Q + +QHWP++
Sbjct: 408 AFKMTEQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQHWPME 467
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 23.4 bits (48), Expect = 3.2
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 288 YMCSDCGNKFVNKTRLKDHINWEHLK 313
Y C CG K LK H +H +
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQ 397
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 4.2
Identities = 11/47 (23%), Positives = 18/47 (38%)
Query: 112 CVEAFPNQEDLNDHNLKKHNKSRSIQAQSRLTADFEQHWRQSRSIQA 158
C+ D + +K K + S+ D E R S+S+ A
Sbjct: 342 CILRMSRPSDKEEREAQKSQKPSPVTGASKSHGDLELRQRSSKSLLA 388
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 9.8
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 77 HLYKEIELTESDIEAERDTEASSDSF 102
+LYK++EL D AE E + F
Sbjct: 330 YLYKQLELHTEDRAAESILEPAKKGF 355
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 9.8
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 28 DPETSEELDWHIAASEEKETPSDQQCSE 55
+ E++E +W + P D++C+E
Sbjct: 181 EEESNENYNWEHKETHIDWQPEDEECTE 208
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.127 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,897
Number of Sequences: 429
Number of extensions: 4586
Number of successful extensions: 54
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 33
length of query: 374
length of database: 140,377
effective HSP length: 59
effective length of query: 315
effective length of database: 115,066
effective search space: 36245790
effective search space used: 36245790
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)
- SilkBase 1999-2023 -