Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001778-TA|BGIBMGA001778-PA|IPR007087|Zinc finger,
C2H2-type
(218 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 45 4e-05
03_06_0607 + 35037467-35038624 42 5e-04
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 40 0.002
09_04_0564 + 18565583-18566449,18569662-18570123 40 0.002
08_02_1172 + 24898290-24899141,24900864-24901328 40 0.002
12_01_0454 + 3580332-3581714 39 0.003
06_03_0743 + 24069752-24070483,24071890-24072345 39 0.004
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 38 0.006
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 38 0.006
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 38 0.008
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 38 0.008
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 37 0.015
01_06_1495 + 37769982-37771496 36 0.019
08_02_1602 - 28148255-28149413,28151927-28152087 36 0.026
02_04_0316 - 21978330-21979397 35 0.045
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 35 0.045
09_02_0366 + 7941550-7942161,7942230-7942775 34 0.10
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 34 0.10
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 33 0.14
10_01_0358 - 3941313-3941328,3942374-3942693,3942774-3942912,394... 33 0.24
03_04_0187 - 18236041-18236643 33 0.24
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 32 0.31
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 32 0.42
05_05_0117 + 22503271-22503891 32 0.42
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 32 0.42
09_02_0226 - 6007656-6008063,6012166-6012678 31 0.55
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 31 0.55
07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392 31 0.55
01_01_0990 + 7847066-7847478,7847713-7848679 31 0.55
07_03_1094 + 23919878-23920520,23921297-23921363,23921364-239214... 31 0.73
05_05_0022 + 21592403-21593083,21593720-21594208 31 0.73
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 31 0.73
01_06_1412 - 37140654-37141088,37141549-37142214 31 0.73
12_02_0916 - 24271151-24271894 31 0.96
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 31 0.96
07_03_1548 + 27630988-27631049,27631632-27631767,27631904-276320... 31 0.96
07_03_1165 - 24459156-24460139 30 1.3
07_03_1104 + 24001594-24002139 30 1.3
03_06_0063 - 31391870-31392679 30 1.7
02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486 30 1.7
11_08_0066 - 28131521-28132012 29 2.2
08_02_0100 + 12350498-12350538,12351216-12351717 29 3.9
04_03_1029 - 21835441-21835856,21836666-21836852 29 3.9
11_01_0063 + 484011-484349,484546-484614,484701-484805,485503-48... 28 5.1
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 28 5.1
03_06_0477 + 34210844-34211356 28 5.1
03_05_0291 - 22837412-22838128 28 5.1
02_01_0007 - 48497-48880 28 5.1
08_02_1057 + 23995782-23996446,23998026-23998167,23998242-239994... 28 6.8
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 28 6.8
04_04_0157 + 23165638-23166633 28 6.8
03_04_0188 - 18241815-18242477 28 6.8
01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667 28 6.8
12_02_0882 - 23978169-23979251 27 8.9
12_01_0066 + 562118-562459,562656-562724,562819-562923,563624-56... 27 8.9
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 27 8.9
07_03_0906 + 22481456-22481802,22482105-22482186,22482299-224824... 27 8.9
05_05_0115 - 22493350-22493874 27 8.9
04_04_0030 + 22279716-22280052,22280644-22281144,22281369-222816... 27 8.9
04_01_0317 + 4268418-4269446 27 8.9
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 27 8.9
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 144 RAHQNIKENLRDKMCQK--CGKAFRYKKSLREHELIHTGEKPLVCGE--CGRRFRQGAAL 199
R H ++ N R +CQ+ CGK F L+ H LIHTG+K +C CG+ F L
Sbjct: 105 RKHAHV-HNERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPGCGKAFSLDFNL 163
Query: 200 YTHCR 204
+H +
Sbjct: 164 RSHLK 168
Score = 40.7 bits (91), Expect = 9e-04
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 126 YIIPQPLATRRCITRHIRRAHQNIKENLRDKMCQK--CGKAFRYKKSLREHELIHTGEKP 183
YI +P ++ + + H I +D +C CGKAF +LR H H E
Sbjct: 116 YICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTHALENY 175
Query: 184 LVC--GECGRRFRQGAALYTHCRRVHQNT 210
VC CG+RF + L +H + H+ T
Sbjct: 176 HVCPFPACGKRFTSDSKLKSHVKG-HEKT 203
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 159 QKCGKAFRYKKSLREHELIHTGEKPLVCGE--CGRRFRQGAALYTHCRRVHQNTHD 212
+ CGK F +LR+H +H E+ +C E CG++F + L H +H D
Sbjct: 92 ENCGKTFVDVAALRKHAHVH-NERQYICQEPGCGKKFVDSSKLKRH-HLIHTGQKD 145
Score = 33.5 bits (73), Expect = 0.14
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 20/164 (12%)
Query: 26 CGKRYPSKYSLLQHERLHRGP----LPREECGVCHKMIRVDL-VKAHARIHEDRQSYEC- 79
CGK++ L +H +H G P CG K +D +++H + H + C
Sbjct: 123 CGKKFVDSSKLKRHHLIHTGQKDFICPHPGCG---KAFSLDFNLRSHLKTHALENYHVCP 179
Query: 80 -LKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSD--GLGMRPDTDIYIIP-QPLATR 135
C K++ S + ++H+K + P SD +P T P P AT+
Sbjct: 180 FPACGKRFTSDSKLKSHVKGHEKTGTPITAQYVPSSDKPQSSSKPATPATTKPTTPAATK 239
Query: 136 R---CITRHIRRAHQNIKENLRDKMC--QKCGKAFRYKKSLREH 174
T+ A + E R +C CGKA+ + L H
Sbjct: 240 TTTPASTKPTTPAPTSFAE--RPYVCPYDGCGKAYIHSYKLNLH 281
>03_06_0607 + 35037467-35038624
Length = 385
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCG-KAFRYKKSLREHELIHTGEKPLVCGE 188
QPL T C+ H RR+H + + C++C K F LR HE H G VC
Sbjct: 236 QPLKTPTCVKNHYRRSHCD-----KSFTCRRCNVKRFSVVADLRTHEK-HCGRDRWVC-S 288
Query: 189 CGRRFRQGAALYTH 202
CG F + L+ H
Sbjct: 289 CGTSFSRKDKLFAH 302
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 146 HQNIKENLRDKMC--QKCGKAFRYKKSLREHELIHTGEKPLVCGE--CGRRFRQGAALYT 201
H+ + + R C + C KAF++ + EH +HTG +P C E CG+ FR +
Sbjct: 1273 HRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVSDFSR 1332
Query: 202 HCRRVHQNTHDRAR 215
H R+ ++ R +
Sbjct: 1333 HKRKTGHSSDKRRK 1346
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 161 CGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAALYTHCRRVHQNTHDRARP 216
C K F K L +H +H E+PL C G + A + R H H RP
Sbjct: 1260 CKKKFFCHKYLLQHRKVHIDERPLKCTWKGCK---KAFKWPWARTEHMRVHTGVRP 1312
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H L+ +C+KCGKAF K R HE + G K C C
Sbjct: 336 KPLKDFRTLQTHYKRKH-----GLKPFLCRKCGKAFAVKGDWRTHEK-NCG-KLWYC-LC 387
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H R
Sbjct: 388 GSEFKHKRSLKDHAR 402
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H L+ +C+KCGKAF K R HE + G K C C
Sbjct: 331 RPLKDFRTLQTHYKRKH-----GLKPFLCRKCGKAFAVKGDWRTHEK-NCG-KLWYC-LC 382
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H R
Sbjct: 383 GSEFKHKRSLKDHAR 397
>12_01_0454 + 3580332-3581714
Length = 460
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCG-KAFRYKKSLREHELIHTGEKPLVCGE 188
QPL T C+ H +R+H + +C +CG K F L+ HE H G +C
Sbjct: 293 QPLKTILCVKNHYKRSHCE-----KRHVCGRCGAKRFSVMADLKTHEK-HCGRDRWLC-S 345
Query: 189 CGRRFRQGAALYTH 202
CG F + L+ H
Sbjct: 346 CGTSFSRKDKLFAH 359
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H ++ MC+KCGKAF + R HE + G K C C
Sbjct: 291 RPLKDFRTLQTHYKRKH-----GIKPFMCRKCGKAFAVRGDWRTHEK-NCG-KLWYCA-C 342
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H R
Sbjct: 343 GSDFKHKRSLKDHIR 357
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
Query: 1 MSFETKRLRVGHSRRAHAEGLACSVCGKRYPSKYSLLQHERLHRG----PLPREECGVCH 56
M+FETK H R + CGKR+ S L +H+ +HR P + C +
Sbjct: 803 MTFETKAELRAHQRNICTD----ESCGKRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTF 858
Query: 57 KMIRVDLVKAHARIHEDRQSYECL--KCDKKYVSKASYENHLK 97
K + H R+H + Y+C C + + + Y H K
Sbjct: 859 KWLWAQ--TEHIRVHTGERPYKCSAPDCGQSFRYVSDYSRHRK 899
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 140 RHIRRAHQNIKENLRDKMC--QKCGKAFRYKKSLREHELIHTGEKPLVCG--ECGRRFR 194
++++R HQ + + R C C F++ + EH +HTGE+P C +CG+ FR
Sbjct: 832 KYLKR-HQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKCSAPDCGQSFR 889
Score = 32.7 bits (71), Expect = 0.24
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 159 QKCGKAFRYKKSLREHELIHTGEKPLVC 186
+ CGK F K L+ H+ +H E+P C
Sbjct: 822 ESCGKRFSSHKYLKRHQCVHRDERPFKC 849
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 146 HQNIKENLRDKMC--QKCGKAFRYKKSLREHELIHTGEKPLVCGE--CGRRFRQGAALYT 201
H+ + + R C + C AF++ + EH +HTG++P VC E C + FR +
Sbjct: 1129 HRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSR 1188
Query: 202 HCRR 205
H R+
Sbjct: 1189 HKRK 1192
Score = 34.3 bits (75), Expect = 0.078
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 161 CGKAFRYKKSLREHELIHTGEKPLVC--GECGRRFRQGAALYTHCRRVHQNTHDR 213
CGK F K L +H +HT ++PL C C F+ A H RVH T DR
Sbjct: 1116 CGKKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHL-RVH--TGDR 1167
Score = 31.9 bits (69), Expect = 0.42
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 1 MSFETKR-LRVGHSRRAHAEGLACSVCGKRYPSKYSLLQHERLHRG--PL--PREECGVC 55
MSF TKR L + S +G CGK++ S LLQH ++H PL P + C +
Sbjct: 1095 MSFRTKRDLSLHKSDICPVKG-----CGKKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMA 1149
Query: 56 HKMIRVDLVKAHARIHEDRQSYECLK--CDKKYVSKASYENHLKFSRAHAV 104
K H R+H + Y C + C + + + + H K H+V
Sbjct: 1150 FKWPWAR--TEHLRVHTGDRPYVCHEPGCAQTFRFVSDFSRH-KRKTGHSV 1197
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 155 DKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGE 188
+ CQ C K F SLREH ++H GEK +V E
Sbjct: 177 ETQCQMCSKVFSTSGSLREHMMMHGGEKVVVKAE 210
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 186 CGECGRRFRQGAALYTHCRRVHQNTHDRARPTA 218
C CG+ F G AL H RR + +R R A
Sbjct: 385 CNTCGKSFGSGQALGGHMRRHYVRKCNRQRGVA 417
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 37.5 bits (83), Expect = 0.008
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 31/178 (17%)
Query: 42 LHRGPLPREECGVCHKMIRVDLVKAHARIHEDRQSYECL--KCDKKYVSKASYENHLKFS 99
+H G +ECG + + +K H + H D +S+ C C Y+ K H+
Sbjct: 55 VHEGDHTCQECGASFQ--KPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKH 112
Query: 100 RAHAVVDVLKDNPPSDGLGMRPDTDIYIIPQPLATRRCITRHIRRAHQN---IKENLRDK 156
+ + DG G + + + + RH++ H++ K N R
Sbjct: 113 QGKLFTCSM------DGCGRK-----------FSIKANMQRHVKEIHEDETATKSN-RQF 154
Query: 157 MCQK--CGKAFRYKKSLREHELIHT--GEKPLVCGE--CGRRFRQGAALYTHCRRVHQ 208
+C++ C K F+Y +++HE H +VC E C + F L H + HQ
Sbjct: 155 VCKEEGCNKVFKYASKMKKHEESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQ 212
Score = 31.1 bits (67), Expect = 0.73
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 141 HIRRAHQNIKENLRDKMC--QKCGKAFRYKKSLREHELIHTGEKPLVCGE--CGRRFRQG 196
H+++ H + R +C + C ++ K L H L H G K C CGR+F
Sbjct: 74 HLKQ-HMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQG-KLFTCSMDGCGRKFSIK 131
Query: 197 AALYTHCRRVHQN 209
A + H + +H++
Sbjct: 132 ANMQRHVKEIHED 144
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 6 KRLRVGHSRRAHAEGLACSV-CGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIRVDLV 64
K+ H + + E + C C K + + L H + + +C +C + +
Sbjct: 172 KKHEESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQYV---QCDICGEKHLKKNI 228
Query: 65 KAHARIHEDRQSYECLK-----CDKKYVSKASYENHLKFS 99
K H R HE+ S E +K C+ + +K++ H+K S
Sbjct: 229 KRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKAS 268
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 138 ITRHIRRAHQNIK--ENLRDKMC--QKCGKAFRYKKSLREHELIHT--GEKPLVCGE--C 189
I RH++ H++ E+ ++ +C + CGK F+Y L++HE H ++C E C
Sbjct: 333 IQRHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKHEESHVKLDYSEVICCEPGC 392
Query: 190 GRRFRQGAALYTHCRRVHQN 209
+ F L H + H++
Sbjct: 393 MKAFTNLECLKAHNKSCHRH 412
>01_06_1495 + 37769982-37771496
Length = 504
Score = 36.3 bits (80), Expect = 0.019
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCG-KAFRYKKSLREHELIHTGEKPLVCGE 188
QPL T C+ H +R+H + + C +C K F L+ HE H G +C
Sbjct: 330 QPLKTILCVKNHYKRSHCD-----KSYTCSRCNTKKFSVIADLKTHEK-HCGRDKWLC-S 382
Query: 189 CGRRFRQGAALYTH 202
CG F + L+ H
Sbjct: 383 CGTTFSRKDKLFGH 396
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 35.9 bits (79), Expect = 0.026
Identities = 41/154 (26%), Positives = 61/154 (39%), Gaps = 21/154 (13%)
Query: 52 CGVCHKMIRVDL-VKAHARIHEDR-QSYECLKCDKKYVSKASYENHLKFSRAHAVVDVLK 109
C VC K + D ++ H R H D +S L K ++K E +R ++
Sbjct: 260 CQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTKLLAKGGDETMAAAARKYSC----- 314
Query: 110 DNPPSDGLGMRPDTDIYIIPQPLATRRCITRHIRRAHQNIKENLRDKMCQKCG-KAFRYK 168
P +G + QPL + C H +R+H + +C +CG K F
Sbjct: 315 ---PQEGCRWNRRHAKF---QPLKSVICAKNHYKRSHCP-----KMYVCNRCGRKHFSVL 363
Query: 169 KSLREHELIHTGEKPLVCGECGRRFRQGAALYTH 202
LR HE H G+ +C CG F + L H
Sbjct: 364 SDLRTHEK-HCGDHRWLC-SCGTSFSRKDKLIGH 395
>02_04_0316 - 21978330-21979397
Length = 355
Score = 35.1 bits (77), Expect = 0.045
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCG--KAFRYKKSLREHELIHTGEKPLVCG 187
+PL + C H RR+H + C++CG K F LR H L H GE+
Sbjct: 209 RPLKSAVCARNHFRRSHCP-----KLYACERCGGKKRFAVLADLRSH-LRHCGEEAQWRC 262
Query: 188 ECGRRFRQGAALYTHCRRVHQNTHDRARP 216
CG F + L+ H +T A P
Sbjct: 263 SCGTTFSRKDKLFGHLALFEGHTPAIAEP 291
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 35.1 bits (77), Expect = 0.045
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H RR H RD C++C K F + R HE + G L C
Sbjct: 227 RPLKDFRTLQTHYRRRH-----GARDFACRRCAKRFAVRGDWRTHEK-NCGR--LWRCAC 278
Query: 190 GRRFRQGAALYTHCR 204
G FR +L H R
Sbjct: 279 GAHFRHKRSLNDHAR 293
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 12 HSRRAH-AEGLACSVCGKRYPSKYSLLQHERLHRGPLPREECGV--CHKMIRVDLVKAHA 68
H RR H A AC C KR+ + HE+ + G L R CG HK D +A
Sbjct: 238 HYRRRHGARDFACRRCAKRFAVRGDWRTHEK-NCGRLWRCACGAHFRHKRSLNDHARAFG 296
Query: 69 RIH 71
H
Sbjct: 297 AAH 299
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H RR H R C++CGK F + R HE + G K C C
Sbjct: 258 RPLKDFRTLQTHYRRKH-----GARPYACRRCGKRFAVRGDWRTHEK-NCG-KLWFC-VC 309
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H R
Sbjct: 310 GSDFKHKRSLKDHVR 324
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 161 CGKAFRYKKSLREHELIHTGEKPLVCGE--CGR 191
C K F L+ H LIHTGEK VC CG+
Sbjct: 79 CDKKFLDSSKLKRHFLIHTGEKNFVCPHEGCGK 111
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 161 CGK--AFRYKKSLREHELIHTGEKPLVCG--ECGRRFRQGAALYTHCRRVHQ 208
CGK AF +L+ H H+ + VC EC RRF Q + L H ++ H+
Sbjct: 109 CGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQHE 160
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 161 CGKAFRYKKSLREHELIHTGEKPLVC--GECGRRFRQGAALYTH 202
CGK F +LR+H +H GE+ VC C ++F + L H
Sbjct: 50 CGKTFVDAGALRKHAHVH-GERQYVCHYAGCDKKFLDSSKLKRH 92
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 33.5 bits (73), Expect = 0.14
Identities = 45/153 (29%), Positives = 59/153 (38%), Gaps = 16/153 (10%)
Query: 61 VDLVKAHARIHEDRQSYECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDGLGMR 120
VD+V+ A R ++ C C K + A+ H+ RAH S G GMR
Sbjct: 306 VDVVELEASYLLARYTHYCQVCGKGFKRDANLRMHM---RAHGDEYKTAAALTSTGAGMR 362
Query: 121 PDTDIYIIPQPLATRRCITRHIR-RAHQNI---KENLRDKMCQK---C----GKAFRYKK 169
P R RH R +A +++ K + R C K C GK F
Sbjct: 363 AAARRCSYSCPAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQFAVLS 422
Query: 170 SLREHELIHTGEKPLVCGECGRRFRQGAALYTH 202
LR HE H GE +C CG F + L H
Sbjct: 423 DLRTHEK-HCGELRWLC-SCGTFFSRKDKLMGH 453
>10_01_0358 -
3941313-3941328,3942374-3942693,3942774-3942912,
3943441-3943543,3944745-3944890,3944941-3945314,
3946416-3946512,3947118-3947566
Length = 547
Score = 32.7 bits (71), Expect = 0.24
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 15 RAHAEGLACSVCGKRYPSKYSLLQHE 40
+ + AC VCGKR+PS+ ++ HE
Sbjct: 38 KGRSSSFACRVCGKRFPSQQAMAGHE 63
>03_04_0187 - 18236041-18236643
Length = 200
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGP 46
CSVCGK +PS +L H+ HR P
Sbjct: 50 CSVCGKAFPSHQALGGHKASHRKP 73
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 32.3 bits (70), Expect = 0.31
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 13/131 (9%)
Query: 77 YECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDGLGMRPDTDIYIIPQPLATRR 136
+ C C K + + + H R H + L+ P P +Y+ P+P
Sbjct: 59 FVCEVCGKGFQRDQNLQLH---RRGHNLPWRLRQRGPG---AAPPRRRVYVCPEPGCVHH 112
Query: 137 CITRHIR-----RAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGECGR 191
TR + + H K + CQ+CGK + + L+ H G + C +CG
Sbjct: 113 NPTRALGDLTGIKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTKT-CGTREYRC-DCGT 170
Query: 192 RFRQGAALYTH 202
F + + TH
Sbjct: 171 LFTRRDSFVTH 181
Score = 30.7 bits (66), Expect = 0.96
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 24/98 (24%)
Query: 23 CSVCGKRYPSKYSLLQHERLH--------RGP---LPREECGVC-------HKMIRV--D 62
C VCGK + +L H R H RGP PR VC H R D
Sbjct: 61 CEVCGKGFQRDQNLQLHRRGHNLPWRLRQRGPGAAPPRRRVYVCPEPGCVHHNPTRALGD 120
Query: 63 L--VKAH-ARIHEDRQSYECLKCDKKYVSKASYENHLK 97
L +K H R H +++ + C +C K+Y +A + H K
Sbjct: 121 LTGIKKHFCRKHGEKR-WTCQRCGKRYAVQADLKAHTK 157
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 31.9 bits (69), Expect = 0.42
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 22/97 (22%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGP---LPREECGVCHKMIRV----------------DL 63
C +C + + +L H R H+ P L RE K + V DL
Sbjct: 68 CEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPTCLHHDPSHALGDL 127
Query: 64 V--KAH-ARIHEDRQSYECLKCDKKYVSKASYENHLK 97
V K H R H + + C +C K Y + Y+ HLK
Sbjct: 128 VGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLK 164
>05_05_0117 + 22503271-22503891
Length = 206
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 10 VGHSRRAHAEGLACSVCGKRYPSKYSLLQHERLHRGP 46
VGH+R A C CG+R+P+ +L H H+ P
Sbjct: 32 VGHARAARV--FECRTCGRRFPTFQALGGHRASHKRP 66
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 159 QKCGKAFRYKKSLREHELIHTGEKPLVC 186
+ CG+ FR K LR H+ IH + P C
Sbjct: 568 KSCGRHFRSHKYLRRHQSIHNDDMPYKC 595
Score = 31.5 bits (68), Expect = 0.55
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 140 RHIRRAHQNIKENLRDKMC--QKCGKAFRYKKSLREHELIHTGEKPLVCGE--CGRRFRQ 195
+++RR HQ+I + C + C AF++ EH +H G++P C C + ++
Sbjct: 578 KYLRR-HQSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYKCTTPGCSKIYKF 636
Query: 196 GAALYTHCRR 205
+ H RR
Sbjct: 637 VSDFTRHKRR 646
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 23 CSV--CGKRYPSKYSLLQHERLHRGPLPR----EECGVCHKMIRVDLVKAHARIHEDRQS 76
C+V CG+ + S L +H+ +H +P E C + K D + H ++H ++
Sbjct: 565 CTVKSCGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKW-SWDRGE-HFQVHAGKRP 622
Query: 77 YECLK--CDKKYVSKASYENH 95
Y+C C K Y + + H
Sbjct: 623 YKCTTPGCSKIYKFVSDFTRH 643
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 31.5 bits (68), Expect = 0.55
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H + C+KCGK + R HE + G + C C
Sbjct: 218 RPLKDFRTLQTHYKRKHC-----AKPFACRKCGKPLAVRGDWRTHEK-NCGRR-WHCA-C 269
Query: 190 GRRFRQGAALYTHCRRVHQNTHDRARP 216
G F+ +L H R ++ +R P
Sbjct: 270 GSDFKHKRSLKDHIRAFGRDHRERPPP 296
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 31.5 bits (68), Expect = 0.55
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 22/97 (22%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGP---LPREECGVCHKMIRV----------------DL 63
C +C + + +L H R H+ P L RE K + V DL
Sbjct: 67 CEICNQGFQRDQNLQMHRRRHKVPWKLLKREAGEAARKRVFVCPEPTCLHHDPSHALGDL 126
Query: 64 V--KAH-ARIHEDRQSYECLKCDKKYVSKASYENHLK 97
V K H R H + + C +C K Y + Y+ HLK
Sbjct: 127 VGIKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLK 163
>07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392
Length = 313
Score = 31.5 bits (68), Expect = 0.55
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 129 PQPLATRRCITRHIRRAHQNIKENLRDKM----CQKCGKAFRYKKSLREH-ELIHTG 180
P +T + H ++HQ+ ++ R ++ C KC KAFR L EH E H G
Sbjct: 253 PARFSTVGALIEHCEKSHQSNSQSSRSRVTVDVCPKCSKAFRDPVLLVEHVERDHGG 309
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 178 HTGEKPLVCGECGRRFRQGAALYTHCRRVHQNTHDRAR 215
++G+ C +C RF AL HC + HQ+ +R
Sbjct: 241 NSGDLVEQCVQCPARFSTVGALIEHCEKSHQSNSQSSR 278
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 31.5 bits (68), Expect = 0.55
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 20/95 (21%)
Query: 23 CSVCGKRYPSKYSLLQHERLHR---------GPLPREECGVC-------HKMIRV--DL- 63
C +CGK + +L H R H G PR+ VC H R DL
Sbjct: 27 CEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEKSCVHHNPSRALGDLT 86
Query: 64 -VKAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
+K H + ++C KC K+Y ++ ++ H K
Sbjct: 87 GIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK 121
>07_03_1094 +
23919878-23920520,23921297-23921363,23921364-23921453,
23922220-23922284,23922372-23922470,23922851-23922992,
23923100-23923139
Length = 381
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 20 GLACSVCGKRYPSKYSLLQHERLHRGP 46
G CSVCGK Y S +L H+ HR P
Sbjct: 86 GYECSVCGKVYGSYQALGGHKTSHRKP 112
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 23 CSVCGKRYPSKYSLLQHERLH 43
CS+C + +PS +L H+RLH
Sbjct: 139 CSICLRTFPSGQALGGHKRLH 159
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 31.1 bits (67), Expect = 0.73
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H + C++C K F K R HE + G K C C
Sbjct: 277 RPLKDFRTLQTHYKRKH-----GAKPFACRRCAKPFAVKGDWRTHEK-NCG-KRWFCA-C 328
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H R
Sbjct: 329 GSDFKHKRSLNDHVR 343
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 31.1 bits (67), Expect = 0.73
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 61 VDLVKAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
V + K R H R+ + C +C K Y ++ Y+ HLK
Sbjct: 115 VGIKKHFRRKHGGRRQWVCARCAKGYAVQSDYKAHLK 151
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 31.1 bits (67), Expect = 0.73
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 130 QPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGEC 189
+PL R + H +R H + C++C K F K R HE + G K C C
Sbjct: 269 RPLKDFRTLQTHYKRKH-----GAKPFRCRRCAKPFAVKGDWRTHEK-NCG-KRWFCA-C 320
Query: 190 GRRFRQGAALYTHCR 204
G F+ +L H R
Sbjct: 321 GSDFKHKRSLNDHVR 335
>12_02_0916 - 24271151-24271894
Length = 247
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLP 48
CSVCGK + S +L H+ HR P P
Sbjct: 93 CSVCGKAFASYQALGGHKASHRKPPP 118
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 11 GHSRRAHAEGLACSVCGKRYPSKYSLLQHERLH 43
G RAH C+VCGK +P+ +L H+R H
Sbjct: 149 GGGGRAHE----CNVCGKAFPTGQALGGHKRCH 177
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 30.7 bits (66), Expect = 0.96
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 121 PDTDIYIIPQPLATRRCITRHIR-----RAHQNIKENLRDKMCQKCGKAFRYKKSLREHE 175
P +Y+ P+P R + + H + K + C++CGK + + H
Sbjct: 84 PRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAH- 142
Query: 176 LIHTGEKPLVCGECGRRFRQGAALYTH 202
+ + G + C +CG F + +L TH
Sbjct: 143 VKNCGTREYRC-DCGILFSRKDSLLTH 168
>07_03_1548 +
27630988-27631049,27631632-27631767,27631904-27632041,
27632168-27632267,27632443-27632552
Length = 181
Score = 30.7 bits (66), Expect = 0.96
Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 14/121 (11%)
Query: 12 HSRRAHAEGLACSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIRVDLVKAHARIH 71
HS C CG P K + +H + P+ C +C K ++ +L H +
Sbjct: 33 HSAHCARNLQKCEHCGYMVPKKL-MDEHYDENHAPMI---CSLCQKTVQRELWDLHKGLQ 88
Query: 72 EDRQSYECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDGLGMRPDTDIYIIPQP 131
++ C CD + + YE+ S A ++ D G R DT IP P
Sbjct: 89 CPQRMLACQYCDFELPAADIYEHQNIVSLAGSMSD----------CGNRLDTTSSSIPNP 138
Query: 132 L 132
L
Sbjct: 139 L 139
>07_03_1165 - 24459156-24460139
Length = 327
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 23 CSVCGKRYPSKYSLLQHERLH 43
C+VCGK YP+ +L H+R H
Sbjct: 220 CNVCGKEYPTGVALGGHKRKH 240
>07_03_1104 + 24001594-24002139
Length = 181
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIRVDLVKAHA-RIHED-------- 73
CS+CGK + S +L H+ HR P H+ + V A + R+ D
Sbjct: 29 CSLCGKAFASYQALGGHKASHRKPSAAAAAPPAHRDVVVAAAPASSGRVAADADAASEAD 88
Query: 74 --RQSYECLKCDKKYVSKASYENHLKFSRAH 102
R+ + C C + + + + H +F H
Sbjct: 89 GRRRRHVCSLCRRGFATGQALGGHKRFHYLH 119
>03_06_0063 - 31391870-31392679
Length = 269
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLP 48
CSVCGK + S +L H+ HR LP
Sbjct: 99 CSVCGKSFSSYQALGGHKTSHRVKLP 124
>02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486
Length = 296
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 179 TGEKPLVCGECGRRFRQGAALYTHCRRVHQNTHDR 213
TG+ P C ECGR+F AL+ H R H H R
Sbjct: 62 TGDAP-PCTECGRQFLSWKALFGH-MRCHPERHWR 94
>11_08_0066 - 28131521-28132012
Length = 163
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 12/60 (20%)
Query: 158 CQKCGKAFRYKKSLREHELIHTG----------EKPLV--CGECGRRFRQGAALYTHCRR 205
C+ CG+ F ++L H H KPL+ C CG F+ G AL H RR
Sbjct: 73 CRTCGRRFPSHQALGGHRTSHLRPTTNKRRPGPSKPLIHACEVCGLGFQMGQALGGHMRR 132
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 4 ETKRLRVGHSRRAHAEGLACSVCGKRYPSKYSLLQHERLHRGP 46
E +R R A A C CG+R+PS +L H H P
Sbjct: 56 EPRRRR--RDEEAAAAAFECRTCGRRFPSHQALGGHRTSHLRP 96
>08_02_0100 + 12350498-12350538,12351216-12351717
Length = 180
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLP 48
CSVCG+ + S +L H+ HR LP
Sbjct: 124 CSVCGRSFSSYQALGGHKTSHRFKLP 149
>04_03_1029 - 21835441-21835856,21836666-21836852
Length = 200
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/11 (90%), Positives = 10/11 (90%)
Query: 43 HRGPLPREECG 53
HR PLPREECG
Sbjct: 92 HRSPLPREECG 102
>11_01_0063 +
484011-484349,484546-484614,484701-484805,485503-485622,
485975-486064,486115-486267
Length = 291
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
Query: 121 PDTDIYIIPQPLATR-----RCITRHIRRAH--QNIKENLRDKM 157
PDTDIY IP+ LA RC+ ++ R H + E+LRD +
Sbjct: 119 PDTDIYSIPRVLAPMPQKYVRCMKKNFGRYHVSEPPVEHLRDPL 162
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/73 (21%), Positives = 29/73 (39%)
Query: 31 PSKYSLLQHERLHRGPLPREECGVCHKMIRVDLVKAHARIHEDRQSYECLKCDKKYVSKA 90
PS+ + + L PL + GV K+ + ++ + Q + C C S+
Sbjct: 207 PSETKHSEAKPLETKPLQTKVSGVKRKVDAIPATTRPGKLQKPAQDWSCALCQVSATSEG 266
Query: 91 SYENHLKFSRAHA 103
+ HL+ R A
Sbjct: 267 ALNEHLEGKRHKA 279
>03_06_0477 + 34210844-34211356
Length = 170
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 155 DKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAALYTH 202
D G A R K++ R + +GE VC C R F AL H
Sbjct: 26 DSSAAAAGGAARRKRARRRSVVATSGEGEFVCKTCSRAFPTFQALGGH 73
>03_05_0291 - 22837412-22838128
Length = 238
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 23 CSVCGKRYPSKYSLLQHERLH-RGPL 47
CSVC K +P+ +L H+R H GP+
Sbjct: 157 CSVCKKTFPTGQALGGHKRCHYEGPI 182
>02_01_0007 - 48497-48880
Length = 127
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 166 RYKKSLREHELIHTGEKP--LVCGECGRRFRQGAALYTHCRRVHQNTHDRARPT 217
R +++ R+ +LI +K CG C R FR AL H VH+ R R T
Sbjct: 9 RREEAWRQQQLILQAKKARSYPCGFCRREFRSAQALGGH-MNVHRRDRARLRLT 61
>08_02_1057 +
23995782-23996446,23998026-23998167,23998242-23999486,
23999521-23999529
Length = 686
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 70 IHEDRQSYECLKCDKKYVSKASYENHL 96
+ +D SYEC +C+ + +++Y +HL
Sbjct: 305 VADDINSYECQQCNLTFHGQSAYAHHL 331
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 163 KAFRYKKSLR-EHELIHTGEKPLVCGECGRRFRQGAALYTHCR 204
KA R KK L E + L C ECG+ F A+Y H R
Sbjct: 166 KAVRSKKKLAVEAQGGAAVRDDLTCPECGKVFMSDKAMYGHLR 208
>04_04_0157 + 23165638-23166633
Length = 331
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 185 VCGECGRRFRQGAALYTHCRRVHQNTH 211
+C CGRRFR L H +H H
Sbjct: 105 LCRVCGRRFRARDTLLRHFDAIHAREH 131
>03_04_0188 - 18241815-18242477
Length = 220
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGP 46
C+VCGK + S +L H+ HR P
Sbjct: 75 CTVCGKAFASYQALGGHKSSHRKP 98
>01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667
Length = 569
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 150 KENLRDKM-CQKCGKAFRYKKSLREHELIHTGEKPLVCGECG 190
KE D + C KCG+AF+ ++ + ++ H +PL C CG
Sbjct: 449 KEEATDHVHCNKCGQAFQQREMEKHMKVFH---EPLQC-PCG 486
>12_02_0882 - 23978169-23979251
Length = 360
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 155 DKMCQKCGKAFRYKKSLREHEL 176
D CQ CGK F+ + L HEL
Sbjct: 6 DSPCQFCGKNFKRRGDLLNHEL 27
>12_01_0066 +
562118-562459,562656-562724,562819-562923,563624-563743,
564085-564174,564223-564375
Length = 292
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Query: 121 PDTDIYIIPQPLATR-----RCITRHIRRAH--QNIKENLRDKM 157
PDTDIY IP+ LA RC ++ R H + E+LRD +
Sbjct: 120 PDTDIYSIPRVLAPMPQKYLRCTKKNFGRYHVSEPPVEHLRDPL 163
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 72 EDRQSYECLKCDKKYVSKASYENHL 96
+D SYEC +C+ + +++Y +HL
Sbjct: 313 DDINSYECQQCNLTFHGQSAYAHHL 337
>07_03_0906 +
22481456-22481802,22482105-22482186,22482299-22482400,
22483005-22483315,22483948-22484044,22484522-22484696,
22485074-22485150,22485632-22486027,22486254-22486303,
22487315-22487382,22488142-22488701
Length = 754
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 52 CGVCHKMIRVD-LVKAHARIHEDRQSYECLKCDKK 85
C C K + +V HA +H D EC+ C +K
Sbjct: 138 CESCGKRLHCGCIVSVHAFVHLDAGGVECVMCARK 172
>05_05_0115 - 22493350-22493874
Length = 174
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 185 VCGECGRRFRQGAALYTHCRRVHQNTHDRARP 216
+C CG FR G AL H RR H+ A P
Sbjct: 91 LCAVCGVEFRMGQALGGHMRR-HRGEAAAATP 121
>04_04_0030 +
22279716-22280052,22280644-22281144,22281369-22281692,
22281860-22281945,22282105-22282517,22282612-22282878,
22282977-22283730
Length = 893
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 104 VVDVLKDNPPSDG-LGMRPDTDIYIIPQPLATRRCITRHIRRAHQNI-KENLRDKMCQKC 161
V+D L + + LG RPD P LA R +RRA + I + N +C
Sbjct: 805 VIDTLSTHSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRC 864
Query: 162 G 162
G
Sbjct: 865 G 865
>04_01_0317 + 4268418-4269446
Length = 342
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLP 48
CS+CG + S +L H R HR +P
Sbjct: 242 CSICGAEFASGQALGGHMRRHRPLIP 267
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 64 VKAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
+K H + ++C KC KKY ++ ++ H K
Sbjct: 111 IKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTK 144
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.324 0.137 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,050,384
Number of Sequences: 37544
Number of extensions: 299467
Number of successful extensions: 1109
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 937
Number of HSP's gapped (non-prelim): 187
length of query: 218
length of database: 14,793,348
effective HSP length: 79
effective length of query: 139
effective length of database: 11,827,372
effective search space: 1644004708
effective search space used: 1644004708
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)
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