Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001778-TA|BGIBMGA001778-PA|IPR007087|Zinc finger,
C2H2-type
(218 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 80 2e-17
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 49 4e-08
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 42 4e-06
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 42 6e-06
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 30 0.019
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 28 0.059
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 27 0.10
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 25 0.55
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 6.8
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 6.8
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 79.8 bits (188), Expect = 2e-17
Identities = 61/214 (28%), Positives = 86/214 (40%), Gaps = 33/214 (15%)
Query: 2 SFETKRLRVGHSRRAHAEG---LACSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKM 58
+F+ K L H R EG C++CGK + L +H R H G P + C C K
Sbjct: 70 AFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQ-CEYCSKS 128
Query: 59 IRV-DLVKAHARIHEDRQSYECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDGL 117
V + + H RIH + Y+C C++ + H+ R H
Sbjct: 129 FSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHM---RIHT-------------- 171
Query: 118 GMRPDTDIYIIPQPLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELI 177
G RP + + + H+R H K + C+ CGK F K L+ H
Sbjct: 172 GERPHK-CTVCSKTFIQSGQLVIHMR-THTGEKPYV----CKACGKGFTCSKQLKVHTRT 225
Query: 178 HTGEKPLVCGECGRRFRQGAALYTHCRRVHQNTH 211
HTGEKP C CG+ F Y H ++HQ H
Sbjct: 226 HTGEKPYTCDICGKSFG-----YNHVLKLHQVAH 254
Score = 55.2 bits (127), Expect = 5e-10
Identities = 55/197 (27%), Positives = 72/197 (36%), Gaps = 32/197 (16%)
Query: 23 CSVCGKRYPSKYSLLQHERLH--RGPLPREECGVCHKMIRVDL-VKAHARIHEDRQSYEC 79
C +C K + K H R H G P C +C K V + H R H + Y+C
Sbjct: 64 CLLCQKAFDQKNLYQSHLRSHGKEGEDPYR-CNICGKTFAVPARLTRHYRTHTGEKPYQC 122
Query: 80 LKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDGLGMRPDTDIYIIPQPLATRRCIT 139
C K + K + H R H K+ P + D + + +
Sbjct: 123 EYCSKSFSVKENLSVH---RRIHT-----KERP------YKCD----VCERAFEHSGKLH 164
Query: 140 RHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAAL 199
RH+R I R C C K F L H HTGEKP VC CG+ F L
Sbjct: 165 RHMR-----IHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQL 219
Query: 200 YTHCRRVHQNTHDRARP 216
+VH TH +P
Sbjct: 220 -----KVHTRTHTGEKP 231
Score = 54.4 bits (125), Expect = 8e-10
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 21/132 (15%)
Query: 73 DRQSYECLKCDKKYVSKASYENHLKFSRAHAVVDVLKDNPPSDGLGMRPDTDIYIIPQPL 132
+ ++Y+CL C K + K Y++HL+ S D + N I +
Sbjct: 58 EEKTYQCLLCQKAFDQKNLYQSHLR-SHGKEGEDPYRCN---------------ICGKTF 101
Query: 133 ATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRR 192
A +TRH R H K C+ C K+F K++L H IHT E+P C C R
Sbjct: 102 AVPARLTRHY-RTHTGEK----PYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERA 156
Query: 193 FRQGAALYTHCR 204
F L+ H R
Sbjct: 157 FEHSGKLHRHMR 168
Score = 52.8 bits (121), Expect = 2e-09
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIRVD-LVKAHARIHEDRQSYECLK 81
C CGK + L H R H G P C +C K + ++K H H + Y+C
Sbjct: 206 CKACGKGFTCSKQLKVHTRTHTGEKPYT-CDICGKSFGYNHVLKLHQVAHYGEKVYKCTL 264
Query: 82 CDKKYVSKASYENHLKFSRAHAVVDVLKDNP 112
C + + SK + E H+K +VV +D+P
Sbjct: 265 CHETFGSKKTMELHIKTHSDSSVVGSPRDSP 295
Score = 43.2 bits (97), Expect = 2e-06
Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 7/163 (4%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMIRVD-LVKAHARIHEDRQSYECLK 81
C C K + K +L H R+H P + C VC + + H RIH + ++C
Sbjct: 122 CEYCSKSFSVKENLSVHRRIHTKERPYK-CDVCERAFEHSGKLHRHMRIHTGERPHKCTV 180
Query: 82 CDKKYVSKASYENHLKF---SRAHAVVDVLKDNPPSDGLGMRPDTDIYIIPQP--LATRR 136
C K ++ H++ + + K S L + T P + +
Sbjct: 181 CSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKS 240
Query: 137 CITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHT 179
H+ + HQ + C C + F KK++ H H+
Sbjct: 241 FGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHS 283
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 48.8 bits (111), Expect = 4e-08
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 40 ERLHRGPLPREECGVCHKMIRVDL-VKAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
ER H G P E C CHK D +K H R+H + Y C CD+++V A+ HL+
Sbjct: 1 ERTHTGEKPFE-CPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLR 58
Score = 47.2 bits (107), Expect = 1e-07
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 158 CQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAALYTHCRRVH 207
C +C K F L+ H +HTGEKP C C R+F Q A L H RVH
Sbjct: 12 CPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHL-RVH 60
Score = 42.7 bits (96), Expect = 3e-06
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 23 CSVCGKRYPSKYSLLQHERLHRGPLPREECGVC-HKMIRVDLVKAHARIHEDRQSYECLK 81
C C KR+ + L H RLH G P C C + ++V ++ H R+H + Y C
Sbjct: 12 CPECHKRFTRDHHLKTHMRLHTGEKP-YHCSHCDRQFVQVANLRRHLRVHTGERPYACEL 70
Query: 82 CDKK 85
C K
Sbjct: 71 CAAK 74
Score = 39.5 bits (88), Expect = 2e-05
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 131 PLATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKPLVCGECG 190
P +R H + H + + C C + F +LR H +HTGE+P C C
Sbjct: 13 PECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELCA 72
Query: 191 RR 192
+
Sbjct: 73 AK 74
Score = 37.1 bits (82), Expect = 1e-04
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 175 ELIHTGEKPLVCGECGRRFRQGAALYTHCR 204
E HTGEKP C EC +RF + L TH R
Sbjct: 1 ERTHTGEKPFECPECHKRFTRDHHLKTHMR 30
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 41.9 bits (94), Expect = 4e-06
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 23 CSVCGKRYPSKYSLLQH-ERLHRGPLPREECGVCHKMIR-VDLVKAHARIHEDRQ 75
C VCGK +K +L +H E+ H PL C +CHK+ R ++ + H I+ RQ
Sbjct: 374 CDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIYHRRQ 428
Score = 28.3 bits (60), Expect = 0.059
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 132 LATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIH 178
L+T+ + RH + H + L +C C K FR SL H+ I+
Sbjct: 381 LSTKLTLKRHKEQQHF---QPLNSAVCALCHKVFRTLNSLNNHKSIY 424
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 41.5 bits (93), Expect = 6e-06
Identities = 18/36 (50%), Positives = 19/36 (52%)
Query: 158 CQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRF 193
C CGKAF L+ H HTGEKP C C R F
Sbjct: 45 CHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAF 80
Score = 37.5 bits (83), Expect = 1e-04
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 19 EGLACSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHKMI-RVDLVKAHARIHEDRQSY 77
+ +C C K Y S +L H R H P +C +C K R L++ H R H + +
Sbjct: 15 KSFSCKYCEKVYVSLGALKMHIRTHTLPC---KCHLCGKAFSRPWLLQGHIRTHTGEKPF 71
Query: 78 ECLKCDKKY 86
C C++ +
Sbjct: 72 SCQHCNRAF 80
Score = 29.1 bits (62), Expect = 0.034
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 15 RAHAEGLACSVCGKRYPSKYSLLQHERLHRGPLPREECGVCHK 57
R H C +CGK + + L H R H G P C C++
Sbjct: 37 RTHTLPCKCHLCGKAFSRPWLLQGHIRTHTGEKP-FSCQHCNR 78
Score = 26.6 bits (56), Expect = 0.18
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 158 CQKCGKAFRYKKSLREHELIHTGEKPLVCGECGRRFRQGAALYTHCR 204
C+ C K + +L+ H HT P C CG+ F + L H R
Sbjct: 19 CKYCEKVYVSLGALKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIR 63
Score = 25.4 bits (53), Expect = 0.42
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 74 RQSYECLKCDKKYVSKASYENHLK 97
++S+ C C+K YVS + + H++
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIR 37
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 29.9 bits (64), Expect = 0.019
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 52 CGVCHKMI--RVDLVKAHARIHEDRQS-YECLKCDKKYVSKASYENHL 96
C +C K++ + L + A H +RQ Y C+ C++ Y S+ S H+
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHI 55
Score = 27.9 bits (59), Expect = 0.078
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 158 CQKCGKAFRYKKSLREHELIHTGEK--PLVCGECGRRFRQGAALYTHCRRVHQN 209
CQ CGK K SL+ H E+ C C R + +L TH H++
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKS 61
Score = 22.6 bits (46), Expect = 2.9
Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 132 LATRRCITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHELIHTGEKP 183
L ++ + RH+ H +E R C C + + + SL H + +P
Sbjct: 15 LCSKASLKRHVADKHAERQEEYR---CVICERVYCSRNSLMTHIYTYHKSRP 63
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 74 RQSYECLKCDKKYVSKASYENHL 96
++ + C C K SKAS + H+
Sbjct: 3 KKLFTCQLCGKVLCSKASLKRHV 25
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 28.3 bits (60), Expect = 0.059
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 33 KYSLLQHERLHRGPLPREECGVC-HKMIRVDLVKAHARIHEDRQSYECLKC 82
K+ L H R H G P +C C + + ++ +H + H + Y C C
Sbjct: 1 KHHLEYHLRNHFGSKP-FKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC 50
Score = 27.9 bits (59), Expect = 0.078
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 67 HARIHEDRQSYECLKCDKKYVSKASYENHLK 97
H R H + ++C KC V+K+ +HLK
Sbjct: 7 HLRNHFGSKPFKCEKCSYSCVNKSMLNSHLK 37
Score = 24.2 bits (50), Expect = 0.97
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 168 KKSLREHELIHTGEKPLVCGECGRRFRQGAALYTHCRRVHQNTH 211
K L H H G KP C +C + L +H + H N +
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKS-HSNVY 43
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 27.5 bits (58), Expect = 0.10
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 158 CQKCGKAFRYKKSLREH--ELIHTGEKPLVCGECGRRFRQGAALYTHCRRVHQNT 210
C C + F SL+ H + + VC C RR+R +L TH H+ +
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGS 62
Score = 24.6 bits (51), Expect = 0.73
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 138 ITRHIRRAHQNIKENLRDKMCQKCGKAFRYKKSLREHE-LIHTGEKPLV 185
+ RH + H+ + L +C+ C + +R K SL H+ L H G ++
Sbjct: 21 LKRHFQDKHEQ-SDTLY--VCEFCNRRYRTKNSLTTHKSLQHRGSSGML 66
Score = 22.2 bits (45), Expect = 3.9
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 50 EECGVCHKMIRVDL-VKAHARI-HEDRQS-YECLKCDKKYVSKASYENH 95
+EC C + +K H + HE + Y C C+++Y +K S H
Sbjct: 6 QECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 25.0 bits (52), Expect = 0.55
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 62 DLVKAHARIHEDRQSYECLKCDKKYVSKASYENHLK 97
DL+KA I DR S +K +VS ENHLK
Sbjct: 72 DLIKAI--IDSDRHSTTREIAEKLHVSHTCIENHLK 105
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 67 HARIHEDRQSYECLKCDKKYVSKASY 92
H+ IH +Y L C+ ++V Y
Sbjct: 197 HSTIHLSTGNYSRLACEIQFVRSMGY 222
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.4 bits (43), Expect = 6.8
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 104 VVDVLKDNPPSDGLGMRPDTDIYIIPQPLATRRCITRHIRRAH 146
+VD L D G R D ++ P L T R++ R H
Sbjct: 189 LVDFLNDLVAIGVAGFRVDAAKHMWPSDLRTIYSRVRNLNRTH 231
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.324 0.137 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,919
Number of Sequences: 429
Number of extensions: 2945
Number of successful extensions: 49
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 34
length of query: 218
length of database: 140,377
effective HSP length: 55
effective length of query: 163
effective length of database: 116,782
effective search space: 19035466
effective search space used: 19035466
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 42 (21.0 bits)
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