BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001777-TA|BGIBMGA001777-PA|IPR007087|Zinc finger,
C2H2-type
(543 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 94 1e-20
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 36 0.004
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 35 0.006
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 35 0.006
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 34 0.008
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 31 0.059
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 26 2.2
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 26 2.2
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 26 2.2
DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist mic... 26 3.0
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 3.9
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 25 6.8
AJ496389-1|CAD43035.1| 103|Anopheles gambiae mannosyl glycoprot... 24 9.0
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 93.9 bits (223), Expect = 1e-20
Identities = 76/301 (25%), Positives = 121/301 (40%), Gaps = 26/301 (8%)
Query: 239 STGP-YKCSECKTKCQTIDVLAQHWITHT--KALQCVICGDLHRSLGEIRKHVNRAHTGV 295
STG Y C+ C + +L++H TH+ + +CV+C ++L ++ HVN HTG
Sbjct: 122 STGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVN-THTGT 180
Query: 296 --FTCKECGDHSRTLREFSQH--YKSKHEKL-VCDHCGKGFYKKRVLESHMRRN--HLPA 348
CK C + T E +H Y+ HE+ C C + L+ H+R + P
Sbjct: 181 KPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPF 240
Query: 349 KCEVCGRQYSLYHTLEVHLRTVHPHLMNGAYNRDASYCVECDRQYPSVYKYRKHLKQSVR 408
+C C L H+R H Y+ C C ++ + H +
Sbjct: 241 QCPHCTYASPDKFKLTRHMRI---HTGEKPYS-----CDVCFARFTQSNSLKAH---KMI 289
Query: 409 HTPKKKVRIPCPECGKVFTRTNYMNNHYRLFHSKDTKHYCQLCNKLFVTGYAARKHKEFV 468
H K C C R + H + H+ D C+ C+ F Y+ + H +
Sbjct: 290 HQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAK-T 348
Query: 469 HDKQTLPKNKICDICGRGFSTNRILTNHRRTHTGERPYKCPHCTAAFAQSTAMHTHMKSQ 528
H+ + + C+ C + R L +H HT ++PYKC C F Q + HM
Sbjct: 349 HEGEKCYR---CEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYY 405
Query: 529 H 529
H
Sbjct: 406 H 406
Score = 64.1 bits (149), Expect = 9e-12
Identities = 71/314 (22%), Positives = 118/314 (37%), Gaps = 36/314 (11%)
Query: 213 YKCEDCVLGYKDKRDWNRHNALHHNTSTGPYKCSECKTKCQTIDVLAQHWITHT--KALQ 270
++C+ C + + RH H T P+KC+EC + L +H THT K Q
Sbjct: 183 HRCKHCDNCFTTSGELIRHIRYRH-THERPHKCTECDYASVELSKLKRHIRTHTGEKPFQ 241
Query: 271 CVICGDLHRSLGEIRKHVNRAHTG--VFTCKEC---GDHSRTLREFSQ-HYKSKHEKLVC 324
C C ++ +H+ R HTG ++C C S +L+ H C
Sbjct: 242 CPHCTYASPDKFKLTRHM-RIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQC 300
Query: 325 DHCGKGFYKKRVLESHMRRNHL---PAKCEVCGRQYSLYHTLEVHLRTVHPHLMNGAYNR 381
C +K L H++ H P KC+ C + ++ ++H +T H Y
Sbjct: 301 KLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKT---HEGEKCYR- 356
Query: 382 DASYCVECDRQYPSVYKYRKHLKQSVRHTPKKKVRIPCPECGKVFTRTNYMNNHYRLFHS 441
C C S+ HL + HT +K + C +C + F + + H +H+
Sbjct: 357 ----CEYCPYASISMRHLESHL---LLHTDQKPYK--CDQCAQTFRQKQLLKRHMNYYHN 407
Query: 442 KD--------TKHYCQLCNKLFVTGYAARKHKEFVHDKQTLPKNKICDICGRGFSTNRIL 493
D H C C + F +H +HD ++ +K + G +
Sbjct: 408 PDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMA-MHDPES-TVSKEMEALREGRQKKVQI 465
Query: 494 TNHRRTHTGERPYK 507
T + GE Y+
Sbjct: 466 TFEEEIYKGEEDYE 479
Score = 61.3 bits (142), Expect = 6e-11
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 446 HYCQLC-NKLFVTGYAARKHKEFVHDKQTLPKNKICDICGRGFSTNRILTNHRRTHTGER 504
+YC NKLF+ + H E K C +C RGF T L NH THTG +
Sbjct: 130 NYCNYTSNKLFLLSRHLKTHSEDRPHK--------CVVCERGFKTLASLQNHVNTHTGTK 181
Query: 505 PYKCPHCTAAFAQSTAMHTHMKSQHKHVMP 534
P++C HC F S + H++ +H H P
Sbjct: 182 PHRCKHCDNCFTTSGELIRHIRYRHTHERP 211
Score = 37.5 bits (83), Expect = 0.001
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 471 KQTLPKNKICDICGRGFSTNRILTNHRRTHTGERPYKCPHCTAAFAQSTAMHTHMKS 527
+Q+ +C+ C + +L+ H +TH+ +RP+KC C F ++ H+ +
Sbjct: 120 QQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNT 176
Score = 27.5 bits (58), Expect = 0.97
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 82 DLECVHE--EKAAQITEEGNSIKIEAETEVALPAKEELDEYDTITYEEDYADD 132
++E + E +K QIT E K E + E ++E DEY+ EED D+
Sbjct: 451 EMEALREGRQKKVQITFEEEIYKGEEDYEGEEDEEDEEDEYEGDDTEEDEEDE 503
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 35.5 bits (78), Expect = 0.004
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 480 CDICGRGFSTNRILTNHRRTHTGERPYKCPHCTAAFAQSTAMHTHMKSQHKHVMP 534
C +CG+ + R NH H R ++CP C A + +S + TH K +H P
Sbjct: 502 CKLCGKVVTHIR---NHYHVHFPGR-FECPLCRATYTRSDNLRTHCKFKHPMFNP 552
Score = 25.0 bits (52), Expect = 5.2
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 416 RIPCPECGKVFTRTNYMNNHYRLFH---SKDTKHYCQLCNKLFVTGYAA 461
R CP C +TR++ + H + H + DT+ + + + + AA
Sbjct: 523 RFECPLCRATYTRSDNLRTHCKFKHPMFNPDTRKFENMLSPTMASQAAA 571
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 34.7 bits (76), Expect = 0.006
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 480 CDICGRGFSTNRILTNHRRTHTGERPYKCPHCTAAFAQSTAMHTHMKSQH 529
C CG+ TNR +H +HT +R CP+C A++++ + +H++ +H
Sbjct: 529 CRSCGKEV-TNR--WHHFHSHTPQRSL-CPYCPASYSRIDTLRSHLRIKH 574
Score = 29.1 bits (62), Expect = 0.32
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 324 CDHCGKGFYKKRVLESHMRRNHLPAK--CEVCGRQYSLYHTLEVHLRTVHPHLMN 376
C CGK + H +H P + C C YS TL HLR H +N
Sbjct: 529 CRSCGKEVTNRW----HHFHSHTPQRSLCPYCPASYSRIDTLRSHLRIKHADRLN 579
Score = 27.1 bits (57), Expect = 1.3
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 409 HTPKKKVRIPCPECGKVFTRTNYMNNHYRLFHS 441
HTP++ + CP C ++R + + +H R+ H+
Sbjct: 546 HTPQRSL---CPYCPASYSRIDTLRSHLRIKHA 575
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 34.7 bits (76), Expect = 0.006
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 480 CDICGRGFSTNRILTNHRRTHTGERPYKCPHCTAAFAQSTAMHTHMKSQH 529
C CG+ TNR +H +HT +R CP+C A++++ + +H++ +H
Sbjct: 505 CRSCGKEV-TNR--WHHFHSHTPQRSL-CPYCPASYSRIDTLRSHLRIKH 550
Score = 29.1 bits (62), Expect = 0.32
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 324 CDHCGKGFYKKRVLESHMRRNHLPAK--CEVCGRQYSLYHTLEVHLRTVHPHLMN 376
C CGK + H +H P + C C YS TL HLR H +N
Sbjct: 505 CRSCGKEVTNRW----HHFHSHTPQRSLCPYCPASYSRIDTLRSHLRIKHADRLN 555
Score = 27.1 bits (57), Expect = 1.3
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 409 HTPKKKVRIPCPECGKVFTRTNYMNNHYRLFHS 441
HTP++ + CP C ++R + + +H R+ H+
Sbjct: 522 HTPQRSL---CPYCPASYSRIDTLRSHLRIKHA 551
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 34.3 bits (75), Expect = 0.008
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 14/135 (10%)
Query: 249 KTKCQTIDVLAQHWITHTKALQCVICGDLHRSLGEIRKHVNR---AHTGVFTCKECGDHS 305
+ K Q +D A T+ +C CG+L L H A GV + S
Sbjct: 274 RPKVQQLDTAAAP--TNHHLYRCPACGNLFVELTNFYNHSCTKAPAQDGVAVASS-NNQS 330
Query: 306 RTLREFSQHYK--SKHEKLVCDHCGKGF-----YKKRVLESHMRRN-HLPAKCEVCGRQY 357
+ R S+ ++ C+ C + Y+K E H N + KC +C + +
Sbjct: 331 QPARTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLF 390
Query: 358 SLYHTLEVHLRTVHP 372
S ++H+R +HP
Sbjct: 391 SQRQDYQLHMRAIHP 405
Score = 34.3 bits (75), Expect = 0.008
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 386 CVECDRQYPSVYKYRKHLKQSVRHTPKKKVRIPCPECGKVFTRTNYMNNHYRLFHSK 442
C CD Y + +Y+KH + V + I C C K+F++ H R H K
Sbjct: 351 CNLCDMSYRTKLQYQKH-EYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPK 406
Score = 26.6 bits (56), Expect = 1.7
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 441 SKDTKHYCQLCNKLFVTGYAARKHKEFVHDKQTLPKNKICDICGRGFSTNRILTNHRR 498
S+ + C LC+ + T +KH+ VH C IC + FS + H R
Sbjct: 344 SEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMR 401
Score = 25.8 bits (54), Expect = 3.0
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 416 RIPCPECGKVF-TRTNYMNNHYRLFHSKDTKHY---CQLCNKLFVTGYAARKHKEFVHDK 471
R C C + T+ Y + Y + H +++ C +C+KLF + H +H K
Sbjct: 348 RFQCNLCDMSYRTKLQYQKHEYEV-HRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPK 406
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.059
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 340 HMRRNHLPA--KCEVCGRQYSLYHTLEVHLRTVHPHLMNGAYN 380
H H P +C VCG++++ ++ H + HP L + YN
Sbjct: 913 HHANIHRPQSHECPVCGQKFTRRDNMKAHCKVKHPELRDRFYN 955
Score = 27.9 bits (59), Expect = 0.73
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 419 CPECGKVFTRTNYMNNHYRLFH 440
CP CG+ FTR + M H ++ H
Sbjct: 925 CPVCGQKFTRRDNMKAHCKVKH 946
Score = 25.8 bits (54), Expect = 3.0
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 467 FVHDKQTLPKNKICDICGRGFSTNRILTNHRRTHTGERPYKCPHCTAAFAQSTAMHTHMK 526
F+ T P C C + S NR +H H + ++CP C F + M H K
Sbjct: 888 FIQLTGTFPTLYSCVSCHKTVS-NR--WHHANIHRPQS-HECPVCGQKFTRRDNMKAHCK 943
Query: 527 SQH 529
+H
Sbjct: 944 VKH 946
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 26.2 bits (55), Expect = 2.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 94 ITEEGNSIKIEAETEVALPAKEELDEYDTITYEEDYADDACMKSI 138
+TE G S AE E+ KE+L Y + +E++ A A S+
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLC-YVALDFEQEMATAASSSSL 237
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 26.2 bits (55), Expect = 2.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 94 ITEEGNSIKIEAETEVALPAKEELDEYDTITYEEDYADDACMKSI 138
+TE G S AE E+ KE+L Y + +E++ A A S+
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLC-YVALDFEQEMATAASSSSL 237
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 26.2 bits (55), Expect = 2.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 94 ITEEGNSIKIEAETEVALPAKEELDEYDTITYEEDYADDACMKSI 138
+TE G S AE E+ KE+L Y + +E++ A A S+
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLC-YVALDFEQEMATAASSSSL 237
>DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist
michelob_x protein.
Length = 201
Score = 25.8 bits (54), Expect = 3.0
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 401 KHLKQSVRHTPKKKVRIPCPECGKVFTRTNYMNNHYRLFHSKDTKHYCQLC 451
+HL + PKKK R P P Y NN+Y ++ ++ H+ C
Sbjct: 136 RHLLDTSASAPKKKKRKPKPP-------RIYNNNYYYNYYCRNISHHFLRC 179
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 25.4 bits (53), Expect = 3.9
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 12 QIQRYRNFYYHYDMVQEN-KDVALCWECTAIFRKIQRFQKQIKNAQISLLLYQLNTRTPL 70
++++ R HY Q+ +D+ +R +Q K ++ ++ ++ Q
Sbjct: 206 KLEKLRKEREHYIEFQKVCRDIEYLTRLYVSYRYLQ-LCKGVEESERTIANLQSVIGESE 264
Query: 71 SKLDTVIKSVYDLECVHEEKAAQITEEGNSIKIEAETEVALPAKEELDEYDTITYEEDYA 130
K+++ + LE +E +I EG + E E ++A+ +K+E T+ E +
Sbjct: 265 QKIESNCATAQTLEQEAKELQERIDTEGGGVLGELEQQLAVESKKEA----TVAAERN-- 318
Query: 131 DDACMKSIIENEQRASKMPSKS 152
MK I EQR K KS
Sbjct: 319 ---TMKDSIGQEQRKLKNLQKS 337
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 24.6 bits (51), Expect = 6.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 325 DHCGKGFYKKRVLESHMRRNHLPAKCEVCGRQ-YSLYHTLEVHLRTVHPHLMN 376
D CG G K V+ S+ +NHL K C ++ ++TL V + L++
Sbjct: 132 DICGPGTKKVHVIFSYKGKNHLINKDIRCKDDVFTHFYTLVVRADNTYEVLID 184
>AJ496389-1|CAD43035.1| 103|Anopheles gambiae mannosyl glycoprotein
transferase protein.
Length = 103
Score = 24.2 bits (50), Expect = 9.0
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 357 YSLYHTLEVHLRTVHPHLMNGAYNRDASY-CVECDRQY 393
YS+Y +EV H M A+NR Y V C R +
Sbjct: 50 YSIYQKVEVTPWISSKHNMGMAFNRTMWYEIVRCARHF 87
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.322 0.134 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,297
Number of Sequences: 2123
Number of extensions: 26668
Number of successful extensions: 109
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 55
Number of HSP's gapped (non-prelim): 37
length of query: 543
length of database: 516,269
effective HSP length: 67
effective length of query: 476
effective length of database: 374,028
effective search space: 178037328
effective search space used: 178037328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 50 (24.2 bits)
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