Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001776-TA|BGIBMGA001776-PA|IPR007087|Zinc finger,
C2H2-type
(1293 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit... 33 0.20
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 31 0.79
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 31 0.79
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 31 1.0
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 30 2.4
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 4.2
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 29 4.2
SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1 |S... 29 5.6
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 5.6
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 29 5.6
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 5.6
SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha... 28 7.4
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 28 7.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 9.8
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 28 9.8
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 28 9.8
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 28 9.8
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 28 9.8
>SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 214 KCDVCYCTYDTELKLETHARRHYLRTAYNHTIADRSDEPMDYTDPPLPSKSNILKEAQDA 273
K Y + L TH R+Y +T Y+ D EP+ + D PLP KEA A
Sbjct: 167 KFGATYVLTKSYLAKYTHIYRYY-QTIYHQAKLDAITEPLKFIDQPLPIIKAENKEAAPA 225
Query: 274 VAFTSFDEPSTIAAPKSKAQ 293
+ APK +A+
Sbjct: 226 KKAEKKKDEKKKNAPKPQAE 245
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 31.5 bits (68), Expect = 0.79
Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 9 QSVLEASGTELLHAQGREIKIEPFTPQFEDDIEIEVKLEEAPN-ISKSTVRSLPEPLQTP 67
++V + EL+ ++ +K+E + +IE+ K EA N + ++ + L + L +
Sbjct: 734 EAVSDEQERELIESEKHRMKLESENLHLQANIELLKKDLEAINVVYEAKIFDLEKRLSSE 793
Query: 68 HNNVNVSTILN-NYNFKVISSSNDVKEIKIEPITPRYEDDEDE-NEIEVKFEEEHNISKA 125
N + +N NY+ + +S +++KE E +T RY + E + E + + EE N K
Sbjct: 794 ANAPELHNPVNLNYDAQ-LSKISEIKENYDELLT-RYRELEGKFLESQAEVEELKNFQKP 851
Query: 126 MV 127
+V
Sbjct: 852 LV 853
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 41 EIEVKLEEAPNISKSTVRSLPEPLQTPHNNVNVSTILNNYNFKVIS 86
++ V ++AP S ++V S P+PLQT + NV+ ++ + KV++
Sbjct: 345 QVNVVSKQAPTTSSTSVIS-PDPLQTAAPSANVNEVIASLESKVVT 389
>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1077
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 415 GHACSICDRLWFKNDLKPITEPQLEVISEWFVKENRRPRREEYEMVCNTCKRSL-NKKSM 473
GH C I D W L P E + +++ W + N R EY+ VC+ + L K+
Sbjct: 287 GH-CHI-DTAW----LWPFAETRRKIVRSWATQMNIMDRYPEYQFVCSQALQYLWLKEDH 340
Query: 474 PPLAKSMDSHIQTNR 488
P + + + ++ N+
Sbjct: 341 PDVFEKLKEYVNQNK 355
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 91 VKEIKIEPITPRYEDDEDENEIEVKFEEEHNISKAMVRRLQ 131
+K +K + TP + D DEN+ +F + ISK +++
Sbjct: 518 IKSVKSDEATPVFSDTSDENDKFHRFRTKSKISKKKYEKME 558
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 1213 RNEMSEIVDQNKFLQLF-DENEDTIMERHRLFETNINIENVVKELEVMTILENDNNGNQ 1270
R + EI ++ L+L +N D L ETNI ++ V KELE + ++N N+ N+
Sbjct: 469 RTQNREIDEEKNHLRLLASKNSDKA-----LAETNIRLQEVTKELETLR-MKNSNDLNE 521
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 516 RCLLWNRRASDQLTSRRTADGEMLPRQLNEDHVINVNIERNLAHKSAYISGYMSKSTISS 575
+CLL R+ + + R + L ++LN D V N+++ + ++KS Y+ + +S
Sbjct: 296 QCLLVARQTDVENSIRLDFISKKLRKRLNGDVVHNLDVPHDKSYKSNYLFSVVLSPHQAS 355
Query: 576 W 576
W
Sbjct: 356 W 356
>SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 445
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 529 TSRRTADGEM-LPRQLNEDHVINVNIERNLAHKSAYISGYMSKSTISSWLTAL----QES 583
T R D EM + R+L+ ++I VN+E N + ++ + S+LT L + +
Sbjct: 198 TKRFFEDHEMTILRKLDHPNIIKVNMEYNSETQFFIFEEMVTGGDLFSYLTKLGTVPEVT 257
Query: 584 TLYRLYEINVDLSRLH 599
TL+ +++I L LH
Sbjct: 258 TLFIMFQILQGLKYLH 273
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.7 bits (61), Expect = 5.6
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 5 HEKDQSVLEASGTELLHAQGREIKIEPFTPQFEDDIEIEVKLE-EAPNISKSTVRSLPEP 63
+E+++ V+ +EL+ + ++ + D + ++K E E+ SK ++
Sbjct: 668 NEENKQVIALKESELVKSNDNKLLLNEQIESLNDQLS-QLKTEMESVTTSKESLADYLSN 726
Query: 64 LQTPHNNVNVSTILNNYNFKVISSSNDVKEIKIEP-----ITPRYEDDEDENEIEVKFEE 118
L+ HN+ S F+ I SSN + +IE +T R D +N I F++
Sbjct: 727 LKERHNDELDSLNKKLREFEGILSSNSSLKSEIEERNNQYVTLRENFDSLQNAIMETFDK 786
Query: 119 E--H---NISKAMVRRLQEPLQADHPEELKTCDGIEDCFGARLKTTDLSRTELEAEREL 172
+ H N +R+L++ + D K I C + + T+ T + ++EL
Sbjct: 787 QVTHCSVNHLVQQIRKLKDENKKDQSGTDKLMKKIYHCEQSLKEKTNSLETLVSEKKEL 845
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 249 SDEPMDYTDPPLPSKSNILKEAQDAVAFTSFDEPSTIAAPKSKAQKQREY 298
SD M +T+ +PS + + DAVAF +F + ST+ P++ + E+
Sbjct: 286 SDSSMQFTNEGMPSPVKGIMSSDDAVAF-NFSQYSTV-YPQNAPENGNEF 333
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 685 PVTPYMVATSEIRRRDRRGATPQKILYVAMKILRQRMMDGIHSTFRNVSVTENIT 739
PV Y+ RD +++ MK++R ++ + I S +S+ EN++
Sbjct: 393 PVLVYISKMVAFSERDLPNHRRKQLSAEEMKLIRSKLSESIESGINTISIEENVS 447
>SPAC823.13c |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 94 IKIEPITPRYEDDEDENEIEVKFEEEHNISKAMVRRLQEPL 134
I +E T Y DD E E+K +E+ ++++ V Q L
Sbjct: 102 IDLERFTKLYRDDYSNKEEEIKAQEDVDVAERRVEEAQNGL 142
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 104 EDDEDENEIEVKFEEEH 120
EDD+DEN+ K EEEH
Sbjct: 739 EDDQDENDQVTKVEEEH 755
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/83 (19%), Positives = 33/83 (39%)
Query: 57 VRSLPEPLQTPHNNVNVSTILNNYNFKVISSSNDVKEIKIEPITPRYEDDEDENEIEVKF 116
V+ LP P +N ++ K I S+ E+K +P + ++ +K
Sbjct: 1176 VKELPVPAPAAPQTLNPPSVSTVQQSKPIESNTHTPEVKATSESPSASSNLEDRAARIKA 1235
Query: 117 EEEHNISKAMVRRLQEPLQADHP 139
E + +++ + +P Q P
Sbjct: 1236 EAQRRMNERLAALGIKPRQKGTP 1258
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 4 FHEKDQSVLEASGTELLHAQG-----REIKIEPFTPQFEDDIEIEVKLEEAPNISKSTVR 58
FH K+ L + T + H R ++ + P +D E K P++ S+V
Sbjct: 68 FHNKEGVPLASKNTNVRHTTASVSTRRALEEKSIIPATDD--EPASKKRRQPSVFNSSVP 125
Query: 59 SLPEPLQTPHNNVN 72
SLP+ L T ++V+
Sbjct: 126 SLPQHLSTKSHSVS 139
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 2 PQFHEKDQSVLEASGTELLHAQG-REIKIEPFTPQFEDDIEI--EVKLEEAPNISKSTVR 58
P+ H+K+ + EA+GT +L ++ + + + FT + I K P+IS + +
Sbjct: 170 PKVHDKENAFAEATGTSILSSKAVQTLLVSDFTENEPKHLSIRPNCKDNNTPSISNTFIE 229
Query: 59 SLPE 62
E
Sbjct: 230 PYKE 233
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 27.9 bits (59), Expect = 9.8
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 43 EVKLEEAPNISKSTVRSLPEPLQTPHNNVNVSTILNNYNFKVISSSNDVKEIKIEPITPR 102
EV P + T++++ ++ P N ++ + N +++ ++ E + ITP
Sbjct: 335 EVSTAANPEVCLETLKAVLGEIKVPTNEEVIAKYVANIAAQLVEEKDNENESWVLNITPY 394
Query: 103 YEDDEDENEIEVKFEEEHNISKAMVRRLQEPLQADHPEELKTCDGIEDC-----FGARLK 157
DE I E+ S A + P A H EE + + + +C +GA++
Sbjct: 395 LTAFIDEAHIHKIVEQLRTRSIAKI-----PGGASHAEEEEEGEDLCNCEFSLAYGAKIL 449
Query: 158 TTDLSRTELEAER 170
L+RT L +R
Sbjct: 450 ---LNRTRLRLKR 459
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 609 KDDPSNRIENISGENAPESEIFASRQHTVIW-NEEDCPKIAPGHQATPLNVIYDRHIEEL 667
+ DP + + N +++ S + ++W NE PK +TP N +Y+R +
Sbjct: 517 RGDPQHESFILKLRNEESHKLWMSVLNRLLWKNEHGSPKDIRSAASTPANPVYNRSSSQT 576
Query: 668 S 668
S
Sbjct: 577 S 577
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,574,117
Number of Sequences: 5004
Number of extensions: 232551
Number of successful extensions: 809
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 796
Number of HSP's gapped (non-prelim): 25
length of query: 1293
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1212
effective length of database: 1,957,154
effective search space: 2372070648
effective search space used: 2372070648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 59 (27.9 bits)
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