GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001776-TA|BGIBMGA001776-PA|IPR007087|Zinc finger,
C2H2-type
         (1293 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     27   2.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   2.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   3.2  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           27   4.2  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           26   5.6  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    26   5.6  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          26   7.4  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          26   7.4  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          26   7.4  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   9.7  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   9.7  

>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 968  GRGQNLEEKAKELRASLDTFNPYLAGEVNSKIDIQFILDE 1007
            G  + + E A+E   +   F P L G+ + KID++ ++ E
Sbjct: 26   GWDEQMNEAAREFLKNYSDFIPMLIGQSHYKIDLRSLIKE 65


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 15/68 (22%), Positives = 30/68 (44%)

Query: 732 VSVTENITRGMLEDTEFMKEYVMQNLAFMKTVPNSVQYWASRKRDLLAMIRQLGKPTALL 791
           V  TE   + +L DTE +   + + L   KT+   ++ W  ++++    + + GK     
Sbjct: 866 VVATEKRIKKVLTDTEEVDRKLSEALKQQKTLQKELESWIQKEKEAQEKLEEDGKRMEKW 925

Query: 792 TISANEIR 799
               N +R
Sbjct: 926 ATKENMLR 933


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 11/32 (34%), Positives = 21/32 (65%)

Query: 971  QNLEEKAKELRASLDTFNPYLAGEVNSKIDIQ 1002
            Q LE++AKEL+  +DT    + GE+  ++ ++
Sbjct: 275  QTLEQEAKELQERIDTEGGGVLGELEQQLAVE 306


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 6/92 (6%)

Query: 968  GRGQNLEEKAKELRASLDTFNPYLAGEVNSKIDIQFILDE---HSCADYVVEYINRSARG 1024
            G  + + E A+E   +   F P L G+   KID++ ++ E   +   +  ++ I      
Sbjct: 26   GWNEQMNEAAREFLKNYPDFIPMLIGQSPYKIDLRSLIMEARANKWHNTTLDEIREDFEA 85

Query: 1025 MG---DLRRELTTMMQEHPEQDYTGQLKALSV 1053
             G   +L  E+    +  PE D +  ++A+ V
Sbjct: 86   NGTTCELEEEVYLQPKHAPEMDGSELMEAVDV 117


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 239 TAYNHTIADRSDEPMDYTDPPLPSKSNILKEAQDAVAFTSFDEPSTIAA 287
           T YN       + P+  T+ PL  KSN  +E    + F +F  P+   A
Sbjct: 90  TFYNELRVAPEEHPVLLTEAPLNPKSN--REKMTQIMFETFAAPAVYVA 136


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 138 HPEELKTCDGIEDCFGARLKTTDLSRTELEAERELAKTHSKYTAKLYKCEKCLVSYDXXX 197
           H + L T D    C     K  D +  +  + +  AKTH     K Y+CE C  +     
Sbjct: 316 HVQNLHTADKPIKC-----KRCDSTFPDRYSYKMHAKTHEG--EKCYRCEYCPYA-SISM 367

Query: 198 XXXXXXXXXXXXXNLYKCDVCYCTYDTELKLETHARRHY 236
                          YKCD C  T+  +  L+ H   ++
Sbjct: 368 RHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYH 406


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 239 TAYNHTIADRSDEPMDYTDPPLPSKSNILKEAQDAVAFTSFDEPSTIAA 287
           T YN       + P+  T+ PL  K+N  +E    + F +F+ P+   A
Sbjct: 90  TFYNELRVAPEEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVA 136


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 239 TAYNHTIADRSDEPMDYTDPPLPSKSNILKEAQDAVAFTSFDEPSTIAA 287
           T YN       + P+  T+ PL  K+N  +E    + F +F+ P+   A
Sbjct: 90  TFYNELRVAPEEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVA 136


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 239 TAYNHTIADRSDEPMDYTDPPLPSKSNILKEAQDAVAFTSFDEPSTIAA 287
           T YN       + P+  T+ PL  K+N  +E    + F +F+ P+   A
Sbjct: 90  TFYNELRVAPEEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVA 136


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
            protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 1213 RNEMSEIVDQNKFLQLFDENEDTIMERHRLFETNINIENVVKELE 1257
            R E  E ++     Q+  EN   I + +RL +    + N+++EL+
Sbjct: 679  RRERMERLEAMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRELK 723


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
            protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 1213 RNEMSEIVDQNKFLQLFDENEDTIMERHRLFETNINIENVVKELE 1257
            R E  E ++     Q+  EN   I + +RL +    + N+++EL+
Sbjct: 679  RRERMERLEAMTTAQIEQENTQMINDLYRLLKKYTGLRNLIRELK 723


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,224,686
Number of Sequences: 2123
Number of extensions: 49688
Number of successful extensions: 100
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 92
Number of HSP's gapped (non-prelim): 14
length of query: 1293
length of database: 516,269
effective HSP length: 72
effective length of query: 1221
effective length of database: 363,413
effective search space: 443727273
effective search space used: 443727273
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)