Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001776-TA|BGIBMGA001776-PA|IPR007087|Zinc finger,
C2H2-type
(1293 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 31 0.046
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 27 1.3
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 26 1.7
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 26 2.3
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 24 7.0
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 24 7.0
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 24 9.2
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.046
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 182 KLYKCEKCLVSYDXXXXXXXXXXXXXXXXNLYKCDVCYCTYDTELKLETHARRHYLRTAY 241
K Y+CE C S+ YKCDVC ++ KL H R H +
Sbjct: 118 KPYQCEYCSKSFSVKENLSVHRRIHTKERP-YKCDVCERAFEHSGKLHRHMRIHTGERPH 176
Query: 242 NHTIADRS 249
T+ ++
Sbjct: 177 KCTVCSKT 184
Score = 27.5 bits (58), Expect = 0.75
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
Query: 174 KTHSKYTAKLYKCEKCLVSYDXXXXXXXXXXXXXXXXNLYKCDVCYCTYDTELKLETHAR 233
++H K Y+C C ++ Y+C+ C ++ + L H R
Sbjct: 82 RSHGKEGEDPYRCNICGKTF-AVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRR 140
Query: 234 RHYLRTAYNHTIADRSDE 251
H Y + +R+ E
Sbjct: 141 IHTKERPYKCDVCERAFE 158
Score = 27.5 bits (58), Expect = 0.75
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 174 KTHSK-YTA-KLYKCEKCLVSYDXXXXXXXXXXXXXXXXNLYKCDVCYCTYDTELKLETH 231
K H++ +T K Y C+ C S+ +YKC +C+ T+ ++ +E H
Sbjct: 220 KVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGE-KVYKCTLCHETFGSKKTMELH 278
Query: 232 ARRH 235
+ H
Sbjct: 279 IKTH 282
Score = 25.8 bits (54), Expect = 2.3
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Query: 157 KTTDLSRTELEAERELAKTHSKYTAKLYKCEKCLVSYDXXXXXXXXXXXXXXXXNLYKCD 216
K T S+T +++ + + + K Y C+ C + Y CD
Sbjct: 177 KCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGF-TCSKQLKVHTRTHTGEKPYTCD 235
Query: 217 VCYCTYDTELKLETHARRHYLRTAYNHTI 245
+C ++ L+ H HY Y T+
Sbjct: 236 ICGKSFGYNHVLKLHQVAHYGEKVYKCTL 264
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 26.6 bits (56), Expect = 1.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 213 YKCDVCYCTYDTELKLETHARRHYLR 238
Y CDVC T T+L L+ H + + +
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQ 397
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.2 bits (55), Expect = 1.7
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Query: 3 QFHEKDQSVLEASGTELLHAQGREIKIEPFTPQFEDDIEIEVKLEEAPNISKSTVRSLPE 62
+ H + + +LE + +++ RE + + + E E E + + ++ P+
Sbjct: 21 KLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDRTERERSREPK 80
Query: 63 PLQTPHNNVNVSTI------LNNYNFKVISSSNDVKEIKIEPITPRY 103
+ + NN N S NNYN K+ + N +++I + P Y
Sbjct: 81 IISSLSNNYNYSNYNNYNNNYNNYNKKLYYNINYIEQIPVPVPVPVY 127
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 25.8 bits (54), Expect = 2.3
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 179 YTAKLYKCEKCLVSYDXXXXXXXXXXXXXXXXNLYKCDVCYCTYDTEL--KLETHARRH 235
+ +K +KCEKC SY N+Y+ CTY T+ L+ H R++
Sbjct: 12 FGSKPFKCEKC--SY-SCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLRKY 67
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 24.2 bits (50), Expect = 7.0
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 1072 RQRMSEASRQIVYIPTVWPAERPCCRKRRQQMDRE-GIDGDSTDVWTKN 1119
R R + ++ Q+ + + R +RRQQ+ R+ G+ +W +N
Sbjct: 22 RPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQN 70
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 24.2 bits (50), Expect = 7.0
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 213 YKCDVCYCTYDTELKLETHARRHYLRTAYNHTIADR 248
++C C+ + + L+TH R H Y+ + DR
Sbjct: 10 FECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDR 45
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.8 bits (49), Expect = 9.2
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 1226 LQLFDENEDTIMERHRLFETNINIENVVKELEV 1258
L +FD D ++ ++RL +IN+ + + V
Sbjct: 163 LNIFDLTSDKLLRQYRLRAEDINMNTFIANIAV 195
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.131 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,314
Number of Sequences: 429
Number of extensions: 15047
Number of successful extensions: 53
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 41
Number of HSP's gapped (non-prelim): 14
length of query: 1293
length of database: 140,377
effective HSP length: 66
effective length of query: 1227
effective length of database: 112,063
effective search space: 137501301
effective search space used: 137501301
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)
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