Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001775-TA|BGIBMGA001775-PA|IPR007087|Zinc finger,
C2H2-type
(387 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 46 7e-06
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 37 0.004
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 37 0.006
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 32 0.12
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 32 0.16
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 32 0.16
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 31 0.21
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 29 1.1
SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyc... 29 1.5
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 29 1.5
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 29 1.5
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 28 1.9
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 28 1.9
SPBC16A3.06 |||tRNA specific adenosine deaminase |Schizosaccharo... 28 2.6
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 28 2.6
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 28 2.6
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 27 3.4
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.4
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 27 3.4
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 27 3.4
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 27 4.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 4.5
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 27 4.5
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 27 4.5
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 27 5.9
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 27 5.9
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 26 7.8
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.8
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 26 7.8
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 46.4 bits (105), Expect = 7e-06
Identities = 41/152 (26%), Positives = 60/152 (39%), Gaps = 11/152 (7%)
Query: 243 KRKHYNFKKIPYKCDSCVLGFMRKENYDLHIVKKHDQTVGEYVCPV--CQVRFACEASMN 300
KR H N K D C F +++ + HI + H + Y C C F+ +
Sbjct: 74 KRCHTNVKPFSCHYDGCDAQFYTQQHLERHI-EVHRKPK-PYACTWEGCDECFSKHQQLR 131
Query: 301 KHKSKHFVSYRCRLCSFETSELWSAVKHDKRKHKFDSNDKIHCAECEVVVKTGDE----- 355
H S C+++ EL A K + H +++KI C G E
Sbjct: 132 SHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKW 191
Query: 356 --LSEHMRLKHVLFCNECGEKFKGKHTLRTHM 385
L H+R HV C+ CG +FK LR H+
Sbjct: 192 SQLQNHIREAHVPSCSICGRQFKTAAHLRHHV 223
Score = 42.7 bits (96), Expect = 8e-05
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 23/151 (15%)
Query: 252 IPYKC--DSCVLGFMRKENYDLHIVKKHDQTVGEYVCP----VCQVRFACEASMNKH-KS 304
+PY C C L F K+ H+ + H++ + Y CP V F + + H +
Sbjct: 142 LPYPCTYQDCELRFATKQKLQNHVNRAHEKIIS-YSCPHESCVGHEGFEKWSQLQNHIRE 200
Query: 305 KHFVSYRCRLCS--FETSELWSAVKHDKRKHK--FDSNDKIHCAE--CEVVVKTGDELSE 358
H S C +C F+T+ + ++H H+ + HC C+ L +
Sbjct: 201 AHVPS--CSICGRQFKTA---AHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKK 255
Query: 359 HMRLKH----VLFCNECGEKFKGKHTLRTHM 385
H+ + H C+ CG KF KH L+ H+
Sbjct: 256 HISVIHEGNMAFHCDSCGTKFGYKHMLQRHL 286
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 253 PYKCDSCVLGFMRKENYDLHIVKKHDQTVGEYVCPVCQVRFACEASMNKHKSKH 306
PY+CD C GF+R + H+ + H+ YVC C RF ++N+HK ++
Sbjct: 472 PYRCDLCKAGFVRHHDLKRHL-RIHENG-RPYVCE-CLKRFNRLDALNRHKQRN 522
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 36.7 bits (81), Expect = 0.006
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 243 KRKHYNFKKIPYKCD--SCVLGFMRKENYDLHIVKKHDQTVGEYVCPVCQVRFACEASMN 300
K + Y I YKCD C F RKE+ H + H + ++CP C F +N
Sbjct: 6 KSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHF-RSHTNSKA-FICPHCSSSFTRSDVLN 63
Query: 301 KH-KSKH 306
+H KH
Sbjct: 64 RHVNQKH 70
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 239 IREDKRKHYNFKKIPYKCDSCVLGFMRKENYDLHIVKKHDQT---VGEYVCPVCQVRFAC 295
++ H N++ P++C C F R+ H ++H+Q + + C C RFA
Sbjct: 587 LKSHMNTHTNYR--PFQCSICKKSFARQ-----HDKRRHEQLHTGIKAFACVTCNQRFAR 639
Query: 296 EASMNKH 302
++N+H
Sbjct: 640 MDALNRH 646
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 31.9 bits (69), Expect = 0.16
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 254 YKCDSCVLGFMRKENYDLHIVKKHDQTVGEYVCPVCQVRFACEASMNKHKSKHFVSYRCR 313
+ C C F R E+ HI H +VC +C RF+ ++ +H+ H +
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEK-PFVC-ICGKRFSRRDNLRQHERLHVNASPRL 480
Query: 314 LCSFETSELWSA 325
C F+ S +S+
Sbjct: 481 ACFFQPSGYYSS 492
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 343 CAECEVVVKTGDELSEHMRLKHVL---FCNECGEKFKGKHTLRTHMR 386
C EC K + L H+R H F CG++F + LR H R
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHER 471
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 31.9 bits (69), Expect = 0.16
Identities = 16/54 (29%), Positives = 21/54 (38%)
Query: 253 PYKCDSCVLGFMRKENYDLHIVKKHDQTVGEYVCPVCQVRFACEASMNKHKSKH 306
PYKC C F R E+ HI + P C RF+ + +H H
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 31.5 bits (68), Expect = 0.21
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 343 CAECEVVVKTGDELSEHMRLKHVLFCNECGE 373
C +C+ V G EL E +R + V +CNECG+
Sbjct: 274 CIKCKHKVD-GSELYEDIRNQRVSYCNECGK 303
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 199 DNDSYSDDTEKEDNQVTNGCVQDFKDKFEEVKYSENELEKIREDKRKHYNFKKI 252
+ND + DT+ + VT +D +K E + +SE+EL + E++ ++++ KI
Sbjct: 22 ENDQ-TIDTKVDVADVTTHVDEDLDNKEEALDFSEDELSDLDENQFENFDESKI 74
>SPAC4A8.03c |ptc4||protein phosphatase 2C Ptc4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 28.7 bits (61), Expect = 1.5
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 39 LSKLDVTTTTNFN--YELEFDYDPLTNADTDKKSHVKTESVYEITDSIETPYNVANTVNA 96
L KL V + L D+ LT V + V +I E+P + AN +
Sbjct: 279 LKKLGVVAEPQLTSIHSLRDDWSFLTLLSDGITDVVSDDEVVDIIKLSESPQDAANNIIR 338
Query: 97 YAEKV------EC-TAKIKGKKPKTVNKETSNNKFKTTS 128
YA+ V C ++ G K +T+N T N + + ++
Sbjct: 339 YAQNVGAVDDITCLVVRLPGWKKRTINDFTKNLRLEKSA 377
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 252 IPYKCDSCVLGFMRKENYDLHIVKKHDQTVGEYVCPV--CQVRFACEASMNKHKSKH 306
+ Y+C C+ GF R + +H + +VC C F ++M +H+ H
Sbjct: 466 VRYRCTECLQGFSRPSSLKIHTYSHTGER--PFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 296 EASMNKHKSKHFVSYRCRLCSFETSELWSAVKHDKRKHKFDSNDKIHCAECEVVVKTGDE 355
EA + + S+ C C+ S + KH K H ++ + + + D
Sbjct: 194 EAELARRSSQRLSPRDCLFCAASFSSFDTCKKHMKASHSLYIPEREYLVDEPSLF---DY 250
Query: 356 LSEHMRLKHVLFCNECGEKFKGKHTLRTHMR 386
L+E + + C C +FK +R HM+
Sbjct: 251 LAEKISIGFT--CLTCNREFKSLEAVRAHMQ 279
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 254 YKCDSCVLGFMRKENYDLHIVKKHDQTVGEYVCPVCQVRFACEASMNKH 302
+ CD C F R EN H K CP C+++ + + +H
Sbjct: 31 FPCDQCAKRFTRHENLTRH--KACHSKAEPIPCPYCEIKCKRKDLLKRH 77
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/40 (27%), Positives = 25/40 (62%)
Query: 2 GYICWECSGIVNKFYKFKLQTVEAQHLLLTRKNMRNSLSK 41
GYI C + KF+ F++ + E+ +L L+ +N+ ++++
Sbjct: 120 GYITSLCLSAILKFFSFRIISEESPNLALSMRNLSFAITQ 159
>SPBC16A3.06 |||tRNA specific adenosine deaminase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 7 ECSGIVNKFYKF--KLQTVEAQHLLLTRKNMRNSLSKLDVTTTTNFNY 52
+C+ +++ K K + VE L+ RK+M N L +L + T NY
Sbjct: 306 QCTQVIHNGIKAGTKAKDVEKSQTLICRKSMMNLLHQLSQSLTNEKNY 353
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 61 LTNADTDKKSHVKTESVYEITDSIETPYNVANTVNAYAEKVECTAKIKGKKPKTVNKETS 120
++N D +++ V+ Y IT ++ NV N A K ++ +G K ++ +S
Sbjct: 2 VSNQDNVQRNDVQK---YPITRFVKRKSNVVLKKNKGAMKSNSNSRSRGNKKLKESQFSS 58
Query: 121 NNKFKTTST 129
+ F+TT T
Sbjct: 59 RDNFRTTQT 67
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 82 DSIETPYNVANTVNAYAEKVECTAKIKGKKPKTVNKETS---NNKFKTTSTLFNKLGKIK 138
+S+ Y N+ +YA ++E TA+ +P+ + ET+ + + TTS +F + +
Sbjct: 359 ESLSNTYRELNSFKSYAVEIENTAQGHTYEPEDLYLETTVFMDGPYGTTSNVFKEYSYVL 418
Query: 139 TI 140
I
Sbjct: 419 LI 420
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 254 YKCDSCVLGFMRKENYDLHIVKKHDQTVGEYVCPVCQVRFACEASMNKHKSKH 306
Y+C C F R+E+ HI + E P C+ RF + +H H
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 3.4
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 62 TNADTDKKSHVKTESVY--EITDSIETPYNVANTVNAY---AEKVECTAKIKGKKPKTVN 116
TN TD + K+ + + T+++ + + T AY A K T K P T+
Sbjct: 506 TNEPTDVSTKSKSAAYHYPATTETVSSKAARSATTPAYVGGATKTPSTTKAVESTPSTLP 565
Query: 117 KETSNNKFKTTSTLFNKLGKIKTIKE 142
S N TT+T K K +++
Sbjct: 566 TSASTNAAATTTTKKPKAAKSTAVRD 591
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 222 FKDKFEEVKYSENELEKIREDKRKHYNFKKIPYKCDSCVLGFMRKENYDLHIVKKHD 278
F ++ E + + +L K D+ K K+IP DS V+ F +K Y H +K H+
Sbjct: 61 FVNENAEERKNSRDLRKQLPDRPKFK--KRIPNN-DSWVVVFTKKNRYFFHNLKSHE 114
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 37 NSLSKLDVTTTTNFNYELEFDYDPLTNADTDKKSHVKTESVYEITDSIETPYNVANTV 94
N LSK + + T+ + ++ PL N + S K E Y +T+ I+T +++V
Sbjct: 102 NFLSKYEYSNGTSTSEFIDSISPPLVNETSTISSSKKLEQNYSVTEVIDTNIITSSSV 159
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 4.5
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 191 IVKGILRKDNDSYSDDTEKEDNQVTNGCVQDFKDKFEEVKYSENELE-KIREDKRKHYNF 249
I K IL+++ND T + T+ + D +E + N+L+ ++ + N
Sbjct: 301 IPKSILKEENDPTKPLTSSKSKNRTSKELDDLFGSDDEQSQNVNDLDGNSANEENEFINH 360
Query: 250 KKIPYKCDSCVLGFMRKENYDLHIVKKHDQ 279
+ D +M EN DL++ KK Q
Sbjct: 361 DGLDSSLDLDGDSYMVDEN-DLNLAKKRKQ 389
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.1 bits (57), Expect = 4.5
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 151 IDS-HVYXXXXXXXXXXXXXXXXXXXISINCSISKKITKSDIVKGILRKDNDSYSDDTEK 209
+DS H Y I N ++ K + S+++ L KD+D+Y+++ +K
Sbjct: 514 VDSYHKYSGVRTKLQVFEENKTNKSAILANQLMTLKSSFSEVMSYEL-KDDDNYNEELDK 572
Query: 210 EDNQVTNGCVQDFKDKFEEVKYSENELEKIRE 241
V+D + K +E + +E+ L +RE
Sbjct: 573 --------LVEDVRKKLQEKEEAESSLRSVRE 596
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.1 bits (57), Expect = 4.5
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 37 NSLSKLDVTTTTNFNYELEFDYDPLTNADTDKKSHVKTESVYEITDSIETPYNVANTVNA 96
N L ++D+ + +E D N+ +D + +SV E+T N +V
Sbjct: 62 NELDEIDINGDSKKLDSVEVDESHDVNSPSDSRLKSSFKSVLELT------ANSMVSVLT 115
Query: 97 YAEKVECTAKIKGKKPK 113
+ K E T+K KGKK K
Sbjct: 116 PSTKTEQTSKGKGKKKK 132
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 219 VQDFKDKFEEVKYSENE-LEKIREDKRKHYNFKKIPY 254
++ K +F+ + + ++ LEKI+E++ K N K +PY
Sbjct: 50 IKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPY 86
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 26.6 bits (56), Expect = 5.9
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 18/166 (10%)
Query: 202 SYSDDTEKEDNQVTNGCVQDFKDKFEEVKYSENELEKIREDKRKHYNFKKI-PYKCDSCV 260
S+ D+ DN+V + + K +++K + E E E++ Y +K+ ++
Sbjct: 38 SHKADSGSSDNEVESD--HESKSSSKKLKENAKEEEGGEEEEEDEYVVEKVLKHRMARKG 95
Query: 261 LGF---MRKENYDLHIVKKHDQT-VGEYVCPVCQVRFACEASMNKHKSKHFVSYRCRLCS 316
G+ ++ E YD D T E C C+ EA N+H + S R R
Sbjct: 96 GGYEYLLKWEGYD----DPSDNTWSSEADCSGCKQLI--EAYWNEHGGRPEPSKRKRTAR 149
Query: 317 FETSELWS----AVKHDKRKHKFDSNDKIHCAECEVVVKTGDELSE 358
+ E + K D+ KH DSN+KI E +K D+ E
Sbjct: 150 PKKPEAKEPSPKSRKTDEDKHDKDSNEKIEDVN-EKTIKFADKSQE 194
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 205 DDTEKEDNQVTNGCVQDFKDKFEEVKYSENELEKIREDKRKHYNFKKIPY 254
D KED V + + FK ++ +Y E++ ++I++ K N KK Y
Sbjct: 21 DHAPKEDESVDDNFPKQFKRLLQQKEYHESKKKEIKKGNLK--NKKKKDY 68
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 26.2 bits (55), Expect = 7.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 57 DYDPLTNADTDKKSHVKTESVYEITDSIETPYNVANTVNAYAEKV 101
DY P +TD S +E+V TD TP +T NA +
Sbjct: 891 DYRPCLRLNTDNSSKQSSENVQSATDP-TTPAKDNSTSNAETSSI 934
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 26.2 bits (55), Expect = 7.8
Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 9/121 (7%)
Query: 43 DVTTTTNFNYELEFDYDPLT---NADTDK---KSHVKTES-VYEITDSIETPYNVANTVN 95
DV T +L + DP + N D K S V+ E + E D +E N N
Sbjct: 10 DVETLMASLDQLGMEADPTSKEFNNDDSKIGAPSEVQDEKELLEFLDQLENDEE-KNEKN 68
Query: 96 AYAEKVECTAKIKGKKPKTVNKETSNNKFKTTSTLFNKLGKIKTIKELNSRNK-QKIDSH 154
E E + + + SN + T NK + T K +N NK Q+ H
Sbjct: 69 PIEEANEENESVAATSNERQQHDASNQPSQAAQTTINKNTESATPKTVNEINKSQEFQEH 128
Query: 155 V 155
V
Sbjct: 129 V 129
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 26.2 bits (55), Expect = 7.8
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 63 NADTDKKSHVKTESVY---EITDSIETPYNVANTVNAYAEKVECT 104
N + KKS+++ SVY +++ S+ PYN T +A + +CT
Sbjct: 162 NMEYGKKSNLQF-SVYPAPQVSTSVVEPYNSVLTTHATLDNSDCT 205
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,838,511
Number of Sequences: 5004
Number of extensions: 81988
Number of successful extensions: 376
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 350
Number of HSP's gapped (non-prelim): 41
length of query: 387
length of database: 2,362,478
effective HSP length: 74
effective length of query: 313
effective length of database: 1,992,182
effective search space: 623552966
effective search space used: 623552966
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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