Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001775-TA|BGIBMGA001775-PA|IPR007087|Zinc finger,
C2H2-type
(387 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 39 0.005
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 39 0.005
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 34 0.14
At3g28770.1 68416.m03591 expressed protein 33 0.32
At5g28646.1 68418.m03507 wave-dampened2 (WVD2) nearly identical ... 33 0.43
At2g17070.1 68415.m01971 expressed protein contains Pfam profile... 32 0.57
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 32 0.57
At1g14740.1 68414.m01762 expressed protein 31 0.99
At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3 d... 31 1.3
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 31 1.7
At4g01660.1 68417.m00216 ABC1 family protein contains Pfam domai... 30 2.3
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 30 2.3
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 30 2.3
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 30 2.3
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 30 2.3
At1g75660.1 68414.m08789 5'-3' exoribonuclease (XRN3) identical ... 30 3.0
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 30 3.0
At1g06150.1 68414.m00646 pentatricopeptide (PPR) repeat-containi... 29 4.0
At5g32605.1 68418.m03879 hypothetical protein 29 5.3
At5g26740.2 68418.m03164 expressed protein contains Pfam profile... 29 5.3
At5g26740.1 68418.m03163 expressed protein contains Pfam profile... 29 5.3
At2g40430.1 68415.m04986 expressed protein identical to Protein ... 29 5.3
At5g47070.1 68418.m05800 protein kinase, putative similar to pro... 29 7.0
At4g35130.1 68417.m04994 pentatricopeptide (PPR) repeat-containi... 29 7.0
At4g29520.1 68417.m04211 expressed protein 29 7.0
At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related... 29 7.0
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 28 9.2
At5g15430.1 68418.m01806 calmodulin-binding protein-related has ... 28 9.2
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 28 9.2
At3g28750.1 68416.m03589 expressed protein 28 9.2
At2g39970.1 68415.m04911 peroxisomal membrane protein (PMP36) id... 28 9.2
At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR... 28 9.2
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 28 9.2
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 39.1 bits (87), Expect = 0.005
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 203 YSDDTEK-EDNQVTNGCVQDFKDKFEEVKYSENELEKIREDKRKHYNFKKIPYKCDSCVL 261
Y +K +D+ V V+ F + +KY NE E + H C+ C
Sbjct: 228 YPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNE-----ECLKSHIRSCHQHINCEICGS 282
Query: 262 GFMRKENYDLHIVKKHDQ--TVGEYVCPV--CQVRFACEASMNKHKSKHFVSYRCRLCSF 317
++K N H+ + HD+ + GE C V C F+ +++ KH R +C F
Sbjct: 283 KHLKK-NIKRHL-RTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGF 340
Query: 318 ETSELWSAVKHDKRKHKFDSNDKIHCAECEVVVKTGDELSEHMR 361
+ A KH + KH+ N H C V+T ++ + R
Sbjct: 341 PGCGMRFAYKHVRNKHE---NSGYHVYTCGDFVETDEDFTSRPR 381
Score = 35.9 bits (79), Expect = 0.046
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 305 KHFVSYRCRLCSFETSELWSAVKHDKRKHKFDSNDKIHCAECEVVVKTGDELSEHMRLKH 364
K +Y C+ C S+ + KH + H+ + ++ CEV DE S H
Sbjct: 15 KDIRNYLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEV-----DEESSS---NH 66
Query: 365 VLFCNECGEKFKGKHTLRTHMR 386
C ECG +FK L+ HM+
Sbjct: 67 T--CQECGAEFKKPAHLKQHMQ 86
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 39.1 bits (87), Expect = 0.005
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 203 YSDDTEK-EDNQVTNGCVQDFKDKFEEVKYSENELEKIREDKRKHYNFKKIPYKCDSCVL 261
Y +K +D+ V V+ F + +KY NE E + H C+ C
Sbjct: 140 YPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNE-----ECLKSHIRSCHQHINCEICGS 194
Query: 262 GFMRKENYDLHIVKKHDQ--TVGEYVCPV--CQVRFACEASMNKHKSKHFVSYRCRLCSF 317
++K N H+ + HD+ + GE C V C F+ +++ KH R +C F
Sbjct: 195 KHLKK-NIKRHL-RTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGF 252
Query: 318 ETSELWSAVKHDKRKHKFDSNDKIHCAECEVVVKTGDELSEHMR 361
+ A KH + KH+ N H C V+T ++ + R
Sbjct: 253 PGCGMRFAYKHVRNKHE---NSGYHVYTCGDFVETDEDFTSRPR 293
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 34.3 bits (75), Expect = 0.14
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 284 YVCPVCQVRFACEASMNKHKSKHFV---SYRCRLCSFETSELWSAVKHDKRKHKFDSNDK 340
Y C VC+ F ++ HK+ H + + T+ S V + KH ++ K
Sbjct: 106 YKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGE--KHPIAASGK 163
Query: 341 IH-CAECEVVVKTGDELSEHMR 361
IH C+ C V TG L H R
Sbjct: 164 IHECSICHKVFPTGQALGGHKR 185
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 33.1 bits (72), Expect = 0.32
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 13/165 (7%)
Query: 99 EKVECTAKIKGKKPKTVNKETSNNKFKTTST-----LFNKL-----GKIKTIKELNSRNK 148
+ + ++K KGK K KE+ N+ K + N+L K +T K NS+ K
Sbjct: 931 DTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLK 990
Query: 149 QKI-DSHVYXXXXXXXXXXXXXXXXXXXISINCSISKKITKSDIVKGILRKDNDSYSDDT 207
++ D+ S +KK K K KD++
Sbjct: 991 EENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKK 1050
Query: 208 EKEDNQVTNGCVQDFKDKFEEVKYSENELEKIREDKRKHYNFKKI 252
EKE+++ ++ + K E K SEN K +EDK++H + K +
Sbjct: 1051 EKEESRDLKAKKKEEETK--EKKESENHKSKKKEDKKEHEDNKSM 1093
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 185 KITKSDIVKGILRKDNDSYSDDTEKED-NQVTNGCVQDFKDKFEEVKYSENEL 236
K +KS + G+ KD DS DD++ D N++ NG KD E++ ++N L
Sbjct: 1747 KDSKSVEINGV--KD-DSLKDDSKNGDINEINNGKEDSVKDNVTEIQGNDNSL 1796
>At5g28646.1 68418.m03507 wave-dampened2 (WVD2) nearly identical to
WAVE-DAMPENED2 [Arabidopsis thaliana] GI:28453880
Length = 293
Score = 32.7 bits (71), Expect = 0.43
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 176 ISINCSISKKITKSDIVKGILRKDND-SYSDDTEKEDNQVTNGCVQDFKDKFEEVKYSEN 234
+S N S IT++D K L +++D S + + ++VT+G F+ K E
Sbjct: 42 LSQNHKSSNVITENDSKKKNLDEEDDCSVASSMKNAKSKVTHGTAPRFRSAQRAEKRKEE 101
Query: 235 ELEKIREDKRKHYNFKKIP 253
E E + RK+ FK P
Sbjct: 102 EQEAAIKQLRKNLKFKANP 120
>At2g17070.1 68415.m01971 expressed protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function;
expression supported by MPSS
Length = 263
Score = 32.3 bits (70), Expect = 0.57
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 184 KKITKSDIVKGILRKDNDSYSDDTEK-EDNQVTNGCVQDFKDKFEEVKYS 232
KKIT + D++ S+ T K ED Q+ C+QDF+D E + S
Sbjct: 200 KKITCEAQENEFTKVDSEFQSEKTLKMEDVQILESCIQDFEDGLESLSKS 249
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.3 bits (70), Expect = 0.57
Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 16/140 (11%)
Query: 254 YKCDSCVLGFMRKENYDLHI------VKKHDQTVGEYVCPVCQVRFACEASMNKHKSKHF 307
+ C C F R N +H+ +K ++ + P +R C K+
Sbjct: 180 FACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNIN 239
Query: 308 VSYRCRLCSFETSELWSAVKHDKRKHKFDSNDKIHCAEC-EVVVKTGDELSEHMRLKHVL 366
L F T + H KRKH + C +C + + GD + +
Sbjct: 240 HPRSKPLKDFRTLQT-----HYKRKH---GSKPFSCGKCGKALAVKGDWRTHEKNCGKLW 291
Query: 367 FCNECGEKFKGKHTLRTHMR 386
+C CG FK K +L+ H+R
Sbjct: 292 YCT-CGSDFKHKRSLKDHIR 310
>At1g14740.1 68414.m01762 expressed protein
Length = 733
Score = 31.5 bits (68), Expect = 0.99
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 11 IVNKFYKFKLQTVEAQHLLLTRKNMRNSLSKL-----DVTTTTNFNYEL-EFDYDPLTNA 64
+V K ++ ++A + ++ N S+ ++ ++T +Y E P T+
Sbjct: 552 MVKKLESKQISPLDASNFIIQFFNYAESIPEIPDPPRELTVAAETSYRKDEASVTPSTSK 611
Query: 65 DTDKKSHVKTESVYEITDSIETPYNVANTVNAYAEKVECTAKIKGKKPKTVNKETSNNKF 124
D KKS T+++ DS+E+ + +K A+I+ + K + E K
Sbjct: 612 DQKKKSFALTDAMMNSFDSLESMVRIKEAETRMFQKKADEARIEAESFKRM-IEMKTEKM 670
Query: 125 KTTSTLFNKLGKIKTIKELNSRNKQKID 152
+ T KL ++ ++E R + K++
Sbjct: 671 EEEYT--EKLARL-CLQETEERRRNKLE 695
>At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3
domain-containing protein similar to SP|Q9P6R9 Cell
cycle control protein cwf22 {Schizosaccharomyces pombe};
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 900
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 199 DNDSYSDDTEKEDNQVTNGCVQDFKDKFEEVKYSENELEKIREDKRKHYNFKKI 252
+N S ++E++D + V+D K++ KY +++ +K+R++ + KKI
Sbjct: 253 ENGSRRRESERKDRSRRDDGVRDEKERRHNDKYDDSQRDKLRKEDSRKREEKKI 306
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 326 VKHDKRKHKFDSNDKIHCAECEVVVKTGDELSEHMRLKH 364
V ++ KH+ ND C C+ + TG L HMR KH
Sbjct: 78 VDQEQVKHRNKENDMHKCTICDQMFGTGQALGGHMR-KH 115
>At4g01660.1 68417.m00216 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 623
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 42 LDVTTTTNFNYEL-EFDYDPLTNADTDKKSHVKTESVYEITDSIETPYNVANTVNAYAEK 100
LD +N+ +L FDY+PL A + T+ E+ I+ P VAN++ + E
Sbjct: 281 LDAELGSNWQSKLTSFDYEPLAAASIGQVHRAVTKDGLEVAMKIQYP-GVANSIESDIEN 339
Query: 101 V 101
V
Sbjct: 340 V 340
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Query: 284 YVCPVCQVRFACEASMNKHKSKHFVSYRCRLCSFETSELWSAVKHDKRKHKFDSNDKIH- 342
+ C +C+ F ++ HK+ H + + E + + K R + KIH
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSI----KAAQLENAGADAGEK--TRSKMLSPSGKIHK 246
Query: 343 CAECEVVVKTGDELSEHMR 361
C C V+ TG L H R
Sbjct: 247 CDICHVLFPTGQALGGHKR 265
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 358 EHMRLKHVLFCNECGEKFKGKHTLRTHMR 386
E + H FC CG+ FK LR HMR
Sbjct: 236 EEILAPHTHFCTICGKGFKRDANLRMHMR 264
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 358 EHMRLKHVLFCNECGEKFKGKHTLRTHMR 386
E + H FC CG+ FK LR HMR
Sbjct: 236 EEILAPHTHFCTICGKGFKRDANLRMHMR 264
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 30.3 bits (65), Expect = 2.3
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 254 YKCDSCVLGFMRKENYDLH---------IVK--KHDQTVGE--YVC--PVCQVRFACEA- 297
Y C+ C GF R +N +H ++K K D+ V + YVC P C C A
Sbjct: 39 YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKRVYVCPEPTCLHHDPCHAL 98
Query: 298 ----SMNKH-KSKHFVSYRCRLCSFETSELWSAVKHDKRKHKFDSNDKIHCAECEVVVKT 352
+ KH + KH V ++ +C E AV+ D + H + H +C V
Sbjct: 99 GDLVGIKKHFRRKHSV-HKQWVC--ERCSKGYAVQSDYKAHLKTCGSRGHSCDCGRVFSR 155
Query: 353 GDELSEH 359
+ EH
Sbjct: 156 VESFIEH 162
>At1g75660.1 68414.m08789 5'-3' exoribonuclease (XRN3) identical to
XRN3 [Arabidopsis thaliana] gi|11875628|gb|AAG40732
Length = 1020
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/54 (29%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Query: 192 VKGILRKDNDSYSDDTEKEDNQVTNGCVQDFKDKFEEVKYS---ENELEKIRED 242
+K ++R+ +D+++ DT +ED +V G +++++ E K+S E+E++R+D
Sbjct: 510 LKELIREKSDAFNSDTTEED-KVKLG-QPGWRERYYEEKFSVVTPEEMERVRKD 561
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 16/109 (14%)
Query: 284 YVCPVCQVRFACEASMNKHKSKHFVSYRCRLCSFETSELWSAVKHDKRKHKFDSNDKIHC 343
YVC +C F + ++ H+ +H V + +L ET+E + KR + +H
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRHKVPW--KLLKRETNE-----EVRKRVYVCPEPTCLHH 122
Query: 344 AECEVVVKTGD--ELSEHMRLKH----VLFCNECGEKFKGKHTLRTHMR 386
C + GD + +H R KH C C + + + + H++
Sbjct: 123 NPCHAL---GDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLK 168
Score = 28.7 bits (61), Expect = 7.0
Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 21/125 (16%)
Query: 254 YKCDSCVLGFMRKENYDLH----------IVKKHDQTVGE--YVC--PVCQVRFACEA-- 297
Y C+ C GF R +N +H + ++ ++ V + YVC P C C A
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALG 129
Query: 298 ---SMNKHKSKHFVSYRCRLCSFETSELWSAVKHDKRKHKFDSNDKIHCAECEVVVKTGD 354
+ KH + +++ +C E AV+ D + H + H +C V +
Sbjct: 130 DLVGIKKHFRRKHSNHKQWIC--ERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVE 187
Query: 355 ELSEH 359
EH
Sbjct: 188 SFIEH 192
>At1g06150.1 68414.m00646 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1322
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 324 SAVKHDKRKHKFDSNDKIHCAECEVVVKTGDELSEHMRL 362
S+++ DKR H F + DK H A EV + DE+ + M L
Sbjct: 1274 SSIRIDKRDHLFAAADKSHSASDEVCLLL-DEIYDQMGL 1311
>At5g32605.1 68418.m03879 hypothetical protein
Length = 365
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 209 KEDNQVTNGCVQDFKDKFEEVKYSENELEKIREDKRKH 246
KE NQV G + ++ +EV+ ++ L+KI E+K +H
Sbjct: 130 KESNQVVFGLLIK-EEPVQEVEANKERLKKIEEEKERH 166
>At5g26740.2 68418.m03164 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 422
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 14 KFYKFKLQTVEAQHLLLTRKNMRNSLSKLD-VTTTTNFNYELEFDYDPLTNADTDKKSHV 72
K Y+ + Q + RKN +K+D V+ +++ + E +D + V
Sbjct: 322 KKYRSRTFVPTGQEMDAMRKNKPVYANKIDGVSVSSSLSSEASSPKSSSVTSDPARSDAV 381
Query: 73 KTESVYEITDSIETPYNVA 91
K+ + + +DS+ET Y+++
Sbjct: 382 KSSLLVDASDSLETMYDMS 400
>At5g26740.1 68418.m03163 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 422
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 14 KFYKFKLQTVEAQHLLLTRKNMRNSLSKLD-VTTTTNFNYELEFDYDPLTNADTDKKSHV 72
K Y+ + Q + RKN +K+D V+ +++ + E +D + V
Sbjct: 322 KKYRSRTFVPTGQEMDAMRKNKPVYANKIDGVSVSSSLSSEASSPKSSSVTSDPARSDAV 381
Query: 73 KTESVYEITDSIETPYNVA 91
K+ + + +DS+ET Y+++
Sbjct: 382 KSSLLVDASDSLETMYDMS 400
>At2g40430.1 68415.m04986 expressed protein identical to Protein
At2g40430 (Swiss-Prot:O22892) [Arabidopsis thaliana];
similar to Glioma tumor suppressor candidate region gene
2 protein (p60) (Swiss-Prot:Q9NZM5) [Homo sapiens]
Length = 442
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 187 TKSDIVKGILRKDNDSYSDDTEKEDNQVTNGCVQDFKDKFEEVKYSENELEKIREDK 243
T S+ + L DN S +D E +N+V+ ++ ++ F ++K S N K EDK
Sbjct: 199 TLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQLKPSSNTNLKKIEDK 255
>At5g47070.1 68418.m05800 protein kinase, putative similar to
protein kinase [Lophopyrum elongatum]
gi|13022177|gb|AAK11674
Length = 410
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 101 VECTAKIKGKKPKTVNKETSNNKFKTTSTLFNKLGKIKTIKELNSRNKQ 149
+ C K KKP+ K+ + NK K L N ++ E +S N Q
Sbjct: 1 MNCLFLFKSKKPRKQQKDNNKNKRKGKELLQNSAPELTNRSETSSFNLQ 49
>At4g35130.1 68417.m04994 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 804
Score = 28.7 bits (61), Expect = 7.0
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 62 TNADTDKKSHVKTESVYEITDSIETPYNVANTVNAYAEKVECTAKIKGKKPKTVNKETSN 121
TN D +SHV T +YE+ D + + + Y V C +++ +P+T+ K SN
Sbjct: 684 TNGD---RSHVATNKIYEVLDVVS---RMVGEEDIY---VHCVSRL---RPETLVKSRSN 731
Query: 122 NKFKTTSTLFNKLGKI--KTIKELNSRNKQKI 151
+ + + L G I +T + + RN +I
Sbjct: 732 SPRRHSVRLATCFGLISTETGRRVTVRNNTRI 763
>At4g29520.1 68417.m04211 expressed protein
Length = 306
Score = 28.7 bits (61), Expect = 7.0
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 184 KKITKSDIVKG-ILRKDNDSYSDDTEKEDNQVTNGCVQDFKDKFEEVKYSENELEKIRED 242
K ++ DI KG I +D+D D+ E+ED++ + K+K E K E + +E
Sbjct: 209 KVYSREDIEKGNIGNEDDDGDDDEDEEEDDKFPKNLGKVLKEK--ESKTEELKKTITKEF 266
Query: 243 KRKHYNFKKIPYKCDSCV 260
K+K K+ K + V
Sbjct: 267 KKKGEALKRHAQKVSNRV 284
>At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related
similar to storekeeper protein GI:14268476 [Solanum
tuberosum]
Length = 328
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 203 YSDDTEKEDNQVTNGCVQDFKDKFE-EVKYSENELEKIREDKRKHYNFKK 251
++ DT K ++ NG + KD EVK ++ + KIR KRK+ KK
Sbjct: 168 FAKDTGKNVSEDMNGFFEKLKDSISFEVK-TDQFVNKIRSMKRKYIENKK 216
>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
shock protein 83 (HSP83) nearly identical to SP|P27323
Heat shock protein 81-1 (HSP81-1) (Heat shock protein
83) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 705
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 192 VKGILRKDNDSYSDDTEKEDNQVTNGCVQDFKDKFEEVKYSENELEKIREDKRKHYNFKK 251
+K +++K ++ S + T + D +D+ E K +E E+E++ E+K K KK
Sbjct: 196 LKDLVKKHSEFISYPIYLWTEKTTEKEISDDEDEDEPKKENEGEVEEVDEEKEKDGKKKK 255
>At5g15430.1 68418.m01806 calmodulin-binding protein-related has
weak similarity to calmodulin-binding proteins
Length = 478
Score = 28.3 bits (60), Expect = 9.2
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
Query: 182 ISKKITKSDIVKGILRKD--NDSYSDDTEKEDNQVTNGCVQ----DFKDKFEEVKYSENE 235
+ K T +IV+ L + DS DD + E +Q C++ D + EE + E+E
Sbjct: 266 VIKMETVDEIVESELNQRCVMDSPIDDPKSEKSQDKGECIETEHEDESSQEEEDEEEEDE 325
Query: 236 LEKIREDKRKHYNFKKIPYKCDSCVLG 262
+ EDK K + +S + G
Sbjct: 326 NVSVSEDKNTTREGKSKAFSAESAITG 352
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 198 KDNDSYSDDTEKEDNQVTNGCVQDFKDKFEEVKYSENELEKI 239
K D ++DD + +D+ + D D +EV +NE EKI
Sbjct: 119 KKKDGHNDDDDSDDDTDDDDDDDDDDDDDDEVDGDDNEKEKI 160
>At3g28750.1 68416.m03589 expressed protein
Length = 333
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 332 KHKFDSNDKIHCAECEVVVKTGDELSEHMRLKHVLFCNECGEKF 375
K+KFD+N KI +E + K +L +R +V ++C KF
Sbjct: 147 KYKFDANAKISASESAEIEKCVMKLKSAIR-SYVKVISQCSTKF 189
>At2g39970.1 68415.m04911 peroxisomal membrane protein (PMP36)
identical to 36kDa-peroxisomal membrane protein (PMP36)
GI:15146342 from [Arabidopsis thaliana]
Length = 331
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 87 PYNVANTVNAYAEKVECTAKIKGKKPKTVNKETSNNKFKTTSTLFNKLGKIKTIKELNS 145
PY NT+ ++ T KG P + + +F T+ KL K + +K N+
Sbjct: 170 PYGTFNTIREVYDEAGITGFWKGVIPTLIMVSNPSMQFMLYETMLTKLKKKRALKGSNN 228
>At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 28.3 bits (60), Expect = 9.2
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 10/92 (10%)
Query: 222 FKDKFEEVKYSENELEKIREDKRKHYNFKKIPYKCDSCVLGFMRKENYDLHIVKKHDQTV 281
F + EV ++EL+K+ E + N KKI SC+ N D V
Sbjct: 599 FAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSN----ATNLEDLYV 654
Query: 282 GEYVCPVCQVRFACEASM-NKHKSKHFVSYRC 312
G C +S+ N HK H + Y C
Sbjct: 655 GS-----CTALVELPSSIGNLHKLAHIMMYSC 681
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 328 HDKRKHKFDSNDKIHCAEC-EVVVKTGDELSEHMRLKHVLFCNECGEKFKGKHTLRTHMR 386
H KRKH + C C + GD + + +C+ CG FK K +L+ H++
Sbjct: 252 HYKRKH---GSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCS-CGSDFKHKRSLKDHVK 307
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.131 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,131,566
Number of Sequences: 28952
Number of extensions: 393949
Number of successful extensions: 1817
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1783
Number of HSP's gapped (non-prelim): 54
length of query: 387
length of database: 12,070,560
effective HSP length: 82
effective length of query: 305
effective length of database: 9,696,496
effective search space: 2957431280
effective search space used: 2957431280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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