Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001774-TA|BGIBMGA001774-PA|undefined
(57 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39468| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.13
SB_40155| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.23
SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.23
SB_8451| Best HMM Match : GRP (HMM E-Value=9.6) 30 0.30
SB_14709| Best HMM Match : Cornifin (HMM E-Value=0.0088) 29 0.39
SB_42832| Best HMM Match : ShTK (HMM E-Value=4.6e-07) 29 0.52
SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1) 29 0.69
SB_35733| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.058) 28 1.2
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.6
SB_27008| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.1
SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15) 27 2.8
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 27 2.8
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 26 4.9
SB_15550| Best HMM Match : NLPC_P60 (HMM E-Value=0.87) 26 4.9
SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0) 25 6.4
SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.4
SB_38532| Best HMM Match : CRAM_rpt (HMM E-Value=2.1e-29) 25 8.5
>SB_39468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1778
Score = 31.1 bits (67), Expect = 0.13
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 22 GHHVSLHRHTARGCHTAMGCHTATGCHTATGCHT 55
G HV L R R C T + CHT C T +GC+T
Sbjct: 1515 GRHVQLKRCNMRKCPTDLLCHT-DPCQT-SGCYT 1546
>SB_40155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 7 ITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+ Q+ A P + H++ + AR H A C+ AT H A+ C+ AT
Sbjct: 66 VATQQHLASPCYVATQQHLASLCYVARQEHLASPCYVATQEHLASPCYVAT 116
Score = 28.3 bits (60), Expect = 0.91
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 7 ITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+ Q+ A P + H++ + A H A C+ AT H A+ C+ AT
Sbjct: 102 VATQEHLASPCYVATQEHLASLCYVATQQHLASPCYVATQEHLASPCYVAT 152
Score = 28.3 bits (60), Expect = 0.91
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 7 ITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHTA 56
+ Q+ A P + H++ + AR H A C+ AT H A+ C+ A
Sbjct: 210 VATQEHLASPCYVATQEHLASPCYVARQQHLASLCYVATQEHLASPCYVA 259
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ AT H A+
Sbjct: 53 YVATQEHLASLCYVATQQHLASPCYVATQQHLAS 86
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 7 ITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+ Q+ A P + H++ + A H A C+ AT H A+ C+ AT
Sbjct: 90 VARQEHLASPCYVATQEHLASPCYVATQEHLASLCYVATQQHLASPCYVAT 140
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ AT H A+
Sbjct: 245 YVATQEHLASPCYVAAQEHLASPCYVATQEHLAS 278
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ AT H A+
Sbjct: 89 YVARQEHLASPCYVATQEHLASPCYVATQEHLAS 122
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 7 ITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+ Q+ A P + H++ + A H A C+ AT H A+ C+ AT
Sbjct: 162 VATQEHLASPCYVATQEHLASLCYVATQEHLASPCYVATQEHLASLCYVAT 212
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ AT H A+
Sbjct: 221 YVATQEHLASPCYVARQQHLASLCYVATQEHLAS 254
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ AT H A+
Sbjct: 161 YVATQEHLASPCYVATQEHLASLCYVATQEHLAS 194
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ AT H A+
Sbjct: 185 YVATQEHLASPCYVATQEHLASLCYVATQEHLAS 218
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ AT H A+
Sbjct: 197 YVATQEHLASLCYVATQEHLASPCYVATQEHLAS 230
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ AT H A+
Sbjct: 41 YVATQEHLASLCYVATQEHLASLCYVATQQHLAS 74
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 7 ITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHTA 56
+ Q+ A P + H++ + A H A C+ AT H A+ C+ A
Sbjct: 186 VATQEHLASPCYVATQEHLASLCYVATQEHLASPCYVATQEHLASPCYVA 235
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ AT H A+
Sbjct: 5 YVAAQEHLASLCYLATQEHLASLCYLATQQHLAS 38
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ H A C+ A H A+ C+ A H A+
Sbjct: 209 YVATQEHLASPCYVATQEHLASPCYVARQQHLAS 242
Score = 25.4 bits (53), Expect = 6.4
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 7 ITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+ Q+ A P + H++ + A H A C+ A H A+ C+ AT
Sbjct: 222 VATQEHLASPCYVARQQHLASLCYVATQEHLASPCYVAAQEHLASPCYVAT 272
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+++ +H A C+ A H A+ C+ AT H A+
Sbjct: 29 YLATQQHLASLCYVATQEHLASLCYVATQEHLAS 62
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
H++ + A H A C+ AT H A+ C+ AT
Sbjct: 47 HLASLCYVATQEHLASLCYVATQQHLASPCYVAT 80
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+V+ +H A C+ A H A+ C+ A H A+
Sbjct: 65 YVATQQHLASPCYVATQQHLASLCYVARQEHLAS 98
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
H++ + A H A C+ AT H A+ C+ AT
Sbjct: 191 HLASPCYVATQEHLASLCYVATQEHLASPCYVAT 224
>SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 30.3 bits (65), Expect = 0.23
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 30 HTARGCHTAMGCHTATGCHTATGCHT 55
HT CH CH T CH CHT
Sbjct: 337 HTT-DCHVTNSCHN-TDCHVTNSCHT 360
Score = 29.1 bits (62), Expect = 0.52
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHT 55
HV+ HT CH CH T CH CHT
Sbjct: 300 HVTNSCHTT-DCHVT-NCHN-TDCHVTNSCHT 328
Score = 28.3 bits (60), Expect = 0.91
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
Query: 35 CHTAMGCHTATGCHTATGCHT 55
CH CHT T CH CHT
Sbjct: 289 CHVT-NCHT-TDCHVTNSCHT 307
>SB_8451| Best HMM Match : GRP (HMM E-Value=9.6)
Length = 158
Score = 29.9 bits (64), Expect = 0.30
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 23 HHVSLHRHTARGCHTAMGCHT--ATGCHTAT 51
HH H H RGCH A+ H G HT T
Sbjct: 114 HHHHHHHHQHRGCHKAVAGHVRLGGGHHTET 144
>SB_14709| Best HMM Match : Cornifin (HMM E-Value=0.0088)
Length = 301
Score = 29.5 bits (63), Expect = 0.39
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
Query: 28 HRHTARGCH--TAMGCHTA--TGC--HTATGCHT 55
H T CH T CHT T C HT T CHT
Sbjct: 205 HTDTRTACHTDTRTACHTNTWTACHTHTRTACHT 238
Score = 29.5 bits (63), Expect = 0.39
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 10/50 (20%)
Query: 14 ACPGHDEFGHHVSLHRHTARGCHTAM--GCHT--ATGCH--TATGCHTAT 57
AC H H + TA CHT + CHT T CH T T CHT T
Sbjct: 227 ACHTHTRTACHTDIR--TA--CHTDIRTACHTDIRTACHTDTRTACHTDT 272
Score = 29.1 bits (62), Expect = 0.52
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Query: 28 HRHTARGCHTAM--GCHT--ATGCH--TATGCHTAT 57
H CHT + CHT T CH T T CHT T
Sbjct: 149 HTDIRTACHTDIRTACHTDTRTACHTDTRTACHTDT 184
Score = 28.7 bits (61), Expect = 0.69
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 6/36 (16%)
Query: 28 HRHTARGCHT--AMGCHT--ATGCH--TATGCHTAT 57
H CHT CHT T CH T T CHT T
Sbjct: 189 HTDIRTACHTDTRTACHTDTRTACHTDTRTACHTNT 224
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
Query: 28 HRHTARGCHTAM--GCHT--ATGCH--TATGCHT 55
H CHT + CHT T CH T T CHT
Sbjct: 101 HTDIRTACHTDIRTACHTDTRTACHTDTRTACHT 134
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 6/34 (17%)
Query: 28 HRHTARGCHT--AMGCHT--ATGCHTA--TGCHT 55
H CHT CHT T CHT T CHT
Sbjct: 37 HTDIRTACHTDTRTACHTDTRTACHTDTWTACHT 70
>SB_42832| Best HMM Match : ShTK (HMM E-Value=4.6e-07)
Length = 500
Score = 29.1 bits (62), Expect = 0.52
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 29 RHTARGCHTAMGCHTATGCHTATGC-HTAT 57
R T G HT G TG HT++G HT+T
Sbjct: 441 RVTGTGSHTRTGSDKRTGSHTSSGSRHTST 470
>SB_12896| Best HMM Match : Plasmodium_HRP (HMM E-Value=1.1)
Length = 284
Score = 28.7 bits (61), Expect = 0.69
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 15 CPGHDEFGHHV--SLH-RHTARGCHTAMGCHTATGCHTATGCH 54
C + +H+ +LH RHT R HT HT HTA H
Sbjct: 129 CTYRIPYRYHIRYTLHVRHTLRTTHTTYATHTVHTRHTACPTH 171
>SB_35733| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.058)
Length = 448
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 23 HHVSLHRHTARGCHTAMGCHTATGCHTATGCHT 55
+H + + H H + HT CHT CHT
Sbjct: 331 YHTTQYYHYTNMSHNTVSYHTIP-CHTTRTCHT 362
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 18 HDEFGHH--VSLHRHTARGC---HTAMGCHTATGCHT 49
H+ +H +SLH H + H + CHT CHT
Sbjct: 292 HNTVSYHTILSLHEHVTQYRIIPHHTIPCHTTRTCHT 328
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 3 TVGVITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTATGCHT 49
T+ T + P H +H + H HT + CHT CHT
Sbjct: 317 TIPCHTTRTCHTIPYHTTQYYHYTNMSHNTVSYHT-IPCHTTRTCHT 362
>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/46 (30%), Positives = 16/46 (34%)
Query: 10 QKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHT 55
Q K H G V+ H R CHT C + CHT
Sbjct: 2 QSSKQGQQHTLQGTIVTQHNPARRSCHTTQPCKGQLSHPARSSCHT 47
>SB_27008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 25 VSLHRHTARGCHTAMGCHTATGCHTATGCHTA 56
VS+ H A G H A+ H A G A + A
Sbjct: 71 VSVGSHVAEGSHVAVWSHVAEGTRVAVRAYAA 102
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 26 SLHRHTARGCHTAMGCHTATGCHTATGCHTA 56
S R + G H A G H A H A G A
Sbjct: 66 SCERKVSVGSHVAEGSHVAVWSHVAEGTRVA 96
>SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15)
Length = 1224
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 30 HTARGCHTAMGCHTATGCHTATGCHT 55
+T RG HT G +T G +T G HT
Sbjct: 1007 NTPRGSHTHDGSNTPEGGNTHDGSHT 1032
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 28 HRHTARGCHTAMGCHTATGCHTATGCHT 55
H H A CH+ C G T CHT
Sbjct: 1338 HSHYAHNCHSDANCTNTKGSFYCT-CHT 1364
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 28 HRHTARGCHTAMGCHTATGCHTATGCH 54
H+H A CH+ C G T CH
Sbjct: 927 HKHLAHNCHSDANCTNTQGSFYCT-CH 952
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/29 (37%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 26 SLHRHTARGCHTAMGCHTATGCHTATGCH 54
S H H A CH+ C G T CH
Sbjct: 294 STHSHYAHNCHSDANCTNTKGSFYCT-CH 321
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 28 HRHTARGCHTAMGCHTATGCHTATGCHT 55
H H A CH C G T CHT
Sbjct: 1629 HSHYAHNCHYDANCTNTKGSFYCT-CHT 1655
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 28 HRHTARGCHTAMGCHTATGCHTATGCHT 55
++H A CH+ C G T CHT
Sbjct: 1188 YKHLAHKCHSDANCTNTKGSFHCT-CHT 1214
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 18 HDEFGHH--VSLHRHTARGCHTAMGCHTATGCHTATGC 53
H GH VS +H R T+ GCH TG C
Sbjct: 582 HLSIGHGDVVSGDQHKTRIRETSTGCHRGTGGSRVASC 619
>SB_15550| Best HMM Match : NLPC_P60 (HMM E-Value=0.87)
Length = 379
Score = 25.8 bits (54), Expect = 4.9
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 6/40 (15%)
Query: 22 GHHVSLHRHTARGCHTAMGCH--TATGCH--TATGCHTAT 57
G H LH T HT G H T T H T TG H T
Sbjct: 334 GEH--LHTQTGEHLHTQTGAHFRTRTDAHLRTQTGAHFRT 371
>SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 18 HDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCH 54
H + HHVS H CH H + H ++ CH
Sbjct: 59 HVSWVHHVSWLCHERWLCHVIWQFHVSLLFHVSSLCH 95
>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1202
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 28 HRHTARGCHTAMGCHTATGCHTATGCHT 55
H H A CH C G T CHT
Sbjct: 105 HSHYAHNCHYDANCTNTKGSFYCT-CHT 131
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 28 HRHTARGCHTAMGCHTATGCHTATGCH 54
H H A+ CH+ C G T CH
Sbjct: 544 HSHYAQNCHSDANCTNTKGSFYCT-CH 569
>SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/38 (31%), Positives = 14/38 (36%)
Query: 18 HDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHT 55
H + HV + HT R H HT H HT
Sbjct: 302 HTKRALHVLHYTHTKRALHELHYTHTKRALHVLHNTHT 339
>SB_38532| Best HMM Match : CRAM_rpt (HMM E-Value=2.1e-29)
Length = 263
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 23 HHVSLHRHTARGCHTAMGCHTATGC---HTATGCHTAT 57
+H ++ H A H A+ C++AT C H T H AT
Sbjct: 183 YHATVQHH-ATVQHHAISCNSATSCNSQHRTTMQHHAT 219
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.324 0.132 0.467
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,292,096
Number of Sequences: 59808
Number of extensions: 75371
Number of successful extensions: 537
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 403
Number of HSP's gapped (non-prelim): 121
length of query: 57
length of database: 16,821,457
effective HSP length: 37
effective length of query: 20
effective length of database: 14,608,561
effective search space: 292171220
effective search space used: 292171220
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 52 (25.0 bits)
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