GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001774-TA|BGIBMGA001774-PA|undefined
         (57 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   0.35 
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    23   1.4  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          22   1.9  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    22   1.9  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    22   2.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 0.35
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 14  ACPGHDEFGHHVSLHRHTARGCHTAMGCHTA 44
           A  GH    HH + H H+ +  H +   ++A
Sbjct: 718 AATGHHHHQHHAAPHHHSLQQQHASSAFNSA 748


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2
          protein.
          Length = 155

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 41 CHTATGCHTATGC 53
          C  +TGC T+T C
Sbjct: 34 CDASTGCSTSTTC 46



 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query: 35 CHTAMGCHTATGC 47
          C  + GC T+T C
Sbjct: 34 CDASTGCSTSTTC 46


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)

Query: 35  CHTAMGCHTATGCHTATGCH 54
           C+   G H AT C    GC+
Sbjct: 401 CNQRYGWHPATVCKIPPGCN 420


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 18  HDEFGHHVSLHRH 30
           H   GHH +LH H
Sbjct: 350 HHHPGHHAALHAH 362


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)

Query: 32  ARGCHTAMGCHTATGCHTATGC 53
           +R C+   G H +T C    GC
Sbjct: 366 SRNCNHHHGFHPSTVCKIPPGC 387


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.132    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,589
Number of Sequences: 2123
Number of extensions: 2317
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 57
length of database: 516,269
effective HSP length: 36
effective length of query: 21
effective length of database: 439,841
effective search space:  9236661
effective search space used:  9236661
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 40 (20.2 bits)