Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001774-TA|BGIBMGA001774-PA|undefined
(57 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens ... 31 0.43
AK127759-1|BAC87117.1| 294|Homo sapiens r (EC 1.6.5.3). protein. 30 1.3
X76785-2|CAA54180.1| 342|Homo sapiens hypothetical protein prot... 29 1.8
AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens ... 29 1.8
AY587847-1|AAS99556.1| 462|Homo sapiens unknown protein. 29 2.3
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 29 3.1
AK092743-1|BAC03963.1| 175|Homo sapiens protein ( Homo sapiens ... 28 4.0
BC032753-1|AAH32753.1| 671|Homo sapiens zinc finger protein 443... 27 7.1
BC011052-1|AAH11052.1| 744|Homo sapiens TRIM2 protein protein. 27 7.1
AY358617-1|AAQ88980.1| 530|Homo sapiens CDH23 protein. 27 7.1
AF220018-1|AAG53472.1| 744|Homo sapiens tripartite motif protei... 27 7.1
AB011414-1|BAA75543.1| 671|Homo sapiens Kruppel-type zinc finge... 27 7.1
AB011089-1|BAA25443.1| 792|Homo sapiens KIAA0517 protein protein. 27 7.1
U95299-1|AAC32288.1| 2003|Homo sapiens Notch4 protein. 27 9.3
U89335-1|AAC63097.1| 1999|Homo sapiens notch4 protein. 27 9.3
D63395-1|BAA09708.1| 1095|Homo sapiens notch related protein pro... 27 9.3
BX284927-1|CAM25850.1| 2003|Homo sapiens Notch homolog 4 (Drosop... 27 9.3
BX284686-1|CAM26209.1| 2003|Homo sapiens Notch homolog 4 (Drosop... 27 9.3
AL845509-1|CAI18564.1| 2003|Homo sapiens Notch homolog 4 (Drosop... 27 9.3
AL845464-12|CAI41803.1| 2003|Homo sapiens Notch homolog 4 (Droso... 27 9.3
AL662884-27|CAI18362.1| 2003|Homo sapiens Notch homolog 4 (Droso... 27 9.3
AL662830-9|CAI17543.1| 2005|Homo sapiens Notch homolog 4 (Drosop... 27 9.3
>AK128083-1|BAC87264.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ46204 fis, clone TESTI4009501. ).
Length = 225
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 28 HRHTARGCHTAMGCHTATGCHTATGCHTAT 57
H+H HT M HT TG HT TG H T
Sbjct: 73 HKHMHTRTHTHM--HTHTGMHTLTGTHVHT 100
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTAT 51
H +H T HT G HT TG H T
Sbjct: 73 HKHMHTRTHTHMHTHTGMHTLTGTHVHT 100
>AK127759-1|BAC87117.1| 294|Homo sapiens r (EC 1.6.5.3). protein.
Length = 294
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 23 HHVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
H + H HT H HT+T HT HT T
Sbjct: 139 HAHNAHMHTRTHAHLHTHAHTSTCAHTLAHIHTCT 173
>X76785-2|CAA54180.1| 342|Homo sapiens hypothetical protein
protein.
Length = 342
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 28 HRHTARGCHTAMGCHTATGCHTATGCHTAT 57
H HT HT HT + CH T HT T
Sbjct: 125 HSHTNTQKHTHAHSHTLSHCHIHTHTHTQT 154
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTAT 51
H + +HT HT CH T HT T
Sbjct: 127 HTNTQKHTHAHSHTLSHCHIHTHTHTQT 154
>AK127601-1|BAC87052.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ45698 fis, clone FEBRA2017811. ).
Length = 415
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHT 55
H+ +H HT HT M + T HT T H+
Sbjct: 254 HIHMHIHTYTHMHTHMDTYPHTHIHTCTHMHS 285
>AY587847-1|AAS99556.1| 462|Homo sapiens unknown protein.
Length = 462
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 10 QKPKACPGHDEFGHHVSLHRHTARGCHTA--MGCHTATGCH 48
+KP+A PGH E HRH G A +G TA G H
Sbjct: 225 KKPQAKPGHQE-NTATGSHRHRYEGGPAAPRLGSRTAPGTH 264
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
H +H HT H M HT T +T H+ T
Sbjct: 28 HTHMHTHTLTYTHIHMHTHTQTHIYTQAHIHSCT 61
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Query: 18 HDEFGHHVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
H H+ HT HT M HT T H HT T
Sbjct: 10 HTHTHAHIRTCIHTCTDTHTHMHTHTLTYTHIHMHTHTQT 49
>AK092743-1|BAC03963.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ35424 fis, clone SMINT2001461. ).
Length = 175
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 23 HHVSLHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
HH +HRHT ++ HT T HT + H T
Sbjct: 97 HHTHMHRHTHTHTDKSI-THTCTDTHTQSQRHRLT 130
>BC032753-1|AAH32753.1| 671|Homo sapiens zinc finger protein 443
protein.
Length = 671
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 8 TAQKPKACPGHDEFGHHVS-----LHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+A+KP AC + HH+ + RHT G H C C ++ H T
Sbjct: 332 SAEKPYACQQCGKAFHHLGSFQRHMIRHTGNGPHKCKICGKGFDCPSSLQSHERT 386
>BC011052-1|AAH11052.1| 744|Homo sapiens TRIM2 protein protein.
Length = 744
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 3 TVGVITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTAT 45
TV + A KP +CP HD G+ + + + C TAM C T
Sbjct: 106 TVTAVAAGKPLSCPNHD--GNVMEFY---CQSCETAM-CRECT 142
>AY358617-1|AAQ88980.1| 530|Homo sapiens CDH23 protein.
Length = 530
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 39 MGCHTATGCHTA 50
MGCH AT CH A
Sbjct: 1 MGCHVATSCHVA 12
>AF220018-1|AAG53472.1| 744|Homo sapiens tripartite motif protein
TRIM2 protein.
Length = 744
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 3 TVGVITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTAT 45
TV + A KP +CP HD G+ + + + C TAM C T
Sbjct: 106 TVTAVAAGKPLSCPNHD--GNVMEFY---CQSCETAM-CRECT 142
>AB011414-1|BAA75543.1| 671|Homo sapiens Kruppel-type zinc finger
protein protein.
Length = 671
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 8 TAQKPKACPGHDEFGHHVS-----LHRHTARGCHTAMGCHTATGCHTATGCHTAT 57
+A+KP AC + HH+ + RHT G H C C ++ H T
Sbjct: 332 SAEKPYACQQCGKAFHHLGSFQRHMIRHTGNGPHKCKICGKGFDCPSSLQSHERT 386
>AB011089-1|BAA25443.1| 792|Homo sapiens KIAA0517 protein protein.
Length = 792
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 3 TVGVITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTAT 45
TV + A KP +CP HD G+ + + + C TAM C T
Sbjct: 154 TVTAVAAGKPLSCPNHD--GNVMEFY---CQSCETAM-CRECT 190
>U95299-1|AAC32288.1| 2003|Homo sapiens Notch4 protein.
Length = 2003
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 10 QKPKAC-PGHDEFGHHVSLHRHTARGCHTA 38
+ P AC P +D++ H + H +GC+TA
Sbjct: 1246 ETPPACTPAYDQYCHDHFHNGHCEKGCNTA 1275
>U89335-1|AAC63097.1| 1999|Homo sapiens notch4 protein.
Length = 1999
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 10 QKPKAC-PGHDEFGHHVSLHRHTARGCHTA 38
+ P AC P +D++ H + H +GC+TA
Sbjct: 1245 ETPPACTPAYDQYCHDHFHNGHCEKGCNTA 1274
>D63395-1|BAA09708.1| 1095|Homo sapiens notch related protein
protein.
Length = 1095
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 10 QKPKAC-PGHDEFGHHVSLHRHTARGCHTA 38
+ P AC P +D++ H + H +GC+TA
Sbjct: 338 ETPPACTPAYDQYCHDHFHNGHCEKGCNTA 367
>BX284927-1|CAM25850.1| 2003|Homo sapiens Notch homolog 4 (Drosophila)
protein.
Length = 2003
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 10 QKPKAC-PGHDEFGHHVSLHRHTARGCHTA 38
+ P AC P +D++ H + H +GC+TA
Sbjct: 1246 ETPPACTPAYDQYCHDHFHNGHCEKGCNTA 1275
>BX284686-1|CAM26209.1| 2003|Homo sapiens Notch homolog 4 (Drosophila)
protein.
Length = 2003
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 10 QKPKAC-PGHDEFGHHVSLHRHTARGCHTA 38
+ P AC P +D++ H + H +GC+TA
Sbjct: 1246 ETPPACTPAYDQYCHDHFHNGHCEKGCNTA 1275
>AL845509-1|CAI18564.1| 2003|Homo sapiens Notch homolog 4 (Drosophila)
protein.
Length = 2003
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 10 QKPKAC-PGHDEFGHHVSLHRHTARGCHTA 38
+ P AC P +D++ H + H +GC+TA
Sbjct: 1246 ETPPACTPAYDQYCHDHFHNGHCEKGCNTA 1275
>AL845464-12|CAI41803.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 10 QKPKAC-PGHDEFGHHVSLHRHTARGCHTA 38
+ P AC P +D++ H + H +GC+TA
Sbjct: 1246 ETPPACTPAYDQYCHDHFHNGHCEKGCNTA 1275
>AL662884-27|CAI18362.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 10 QKPKAC-PGHDEFGHHVSLHRHTARGCHTA 38
+ P AC P +D++ H + H +GC+TA
Sbjct: 1246 ETPPACTPAYDQYCHDHFHNGHCEKGCNTA 1275
>AL662830-9|CAI17543.1| 2005|Homo sapiens Notch homolog 4 (Drosophila)
protein.
Length = 2005
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 10 QKPKAC-PGHDEFGHHVSLHRHTARGCHTA 38
+ P AC P +D++ H + H +GC+TA
Sbjct: 1248 ETPPACTPAYDQYCHDHFHNGHCEKGCNTA 1277
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.324 0.132 0.467
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,491,198
Number of Sequences: 224733
Number of extensions: 284597
Number of successful extensions: 1021
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 77
length of query: 57
length of database: 73,234,838
effective HSP length: 37
effective length of query: 20
effective length of database: 64,919,717
effective search space: 1298394340
effective search space used: 1298394340
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 57 (27.1 bits)
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