GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001774-TA|BGIBMGA001774-PA|undefined
         (57 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-733|AAF46028.2|  126|Drosophila melanogaster CG12732-PA...    30   0.44 
AY058670-1|AAL13899.1|  546|Drosophila melanogaster LD38109p pro...    27   4.1  
AE014297-949|ABC66167.1|  546|Drosophila melanogaster CG8147-PB,...    27   4.1  
AE014297-948|AAF54384.4|  546|Drosophila melanogaster CG8147-PA,...    27   4.1  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    27   4.1  
AY061318-1|AAL28866.1|  331|Drosophila melanogaster LD23604p pro...    25   9.5  
AF106677-1|AAD05225.1|  693|Drosophila melanogaster dissatisfact...    25   9.5  
AE014298-2747|AAF48866.1|  331|Drosophila melanogaster CG6540-PA...    25   9.5  
AE014134-989|AAF52303.1|  691|Drosophila melanogaster CG9019-PA ...    25   9.5  

>AE014298-733|AAF46028.2|  126|Drosophila melanogaster CG12732-PA
          protein.
          Length = 126

 Score = 29.9 bits (64), Expect = 0.44
 Identities = 12/31 (38%), Positives = 13/31 (41%)

Query: 24 HVSLHRHTARGCHTAMGCHTATGCHTATGCH 54
          H S   H A   HTA+  H     HTA   H
Sbjct: 4  HASAAAHAAHAGHTALAAHAGHTAHTALAAH 34


>AY058670-1|AAL13899.1|  546|Drosophila melanogaster LD38109p
           protein.
          Length = 546

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 16/44 (36%), Positives = 20/44 (45%)

Query: 2   GTVGVITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTAT 45
           GT+GV  A + K C    +  HHVS     A+    A G  T T
Sbjct: 161 GTIGVSAAVQFKDCQAQAQAAHHVSSIAAWAQKQGMATGLVTTT 204


>AE014297-949|ABC66167.1|  546|Drosophila melanogaster CG8147-PB,
           isoform B protein.
          Length = 546

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 16/44 (36%), Positives = 20/44 (45%)

Query: 2   GTVGVITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTAT 45
           GT+GV  A + K C    +  HHVS     A+    A G  T T
Sbjct: 161 GTIGVSAAVQFKDCQAQAQAAHHVSSIAAWAQKQGMATGLVTTT 204


>AE014297-948|AAF54384.4|  546|Drosophila melanogaster CG8147-PA,
           isoform A protein.
          Length = 546

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 16/44 (36%), Positives = 20/44 (45%)

Query: 2   GTVGVITAQKPKACPGHDEFGHHVSLHRHTARGCHTAMGCHTAT 45
           GT+GV  A + K C    +  HHVS     A+    A G  T T
Sbjct: 161 GTIGVSAAVQFKDCQAQAQAAHHVSSIAAWAQKQGMATGLVTTT 204


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 18   HDEFGHHVSLHRHTARGCHTAMGCHTATGC 47
            +D F  HV LH     GCH    C  +  C
Sbjct: 2992 NDCFLGHVCLHNKCVYGCHVDDDCSASESC 3021


>AY061318-1|AAL28866.1|  331|Drosophila melanogaster LD23604p
           protein.
          Length = 331

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 34  GCHTAMGCHTATGCHTATGCHTAT 57
           G HTA+G +++T  H  T  H  T
Sbjct: 78  GAHTAVGANSSTTAHGQTHSHHQT 101


>AF106677-1|AAD05225.1|  693|Drosophila melanogaster dissatisfaction
           protein.
          Length = 693

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 23  HHVSLHRHTARGCHTAMGCHTATGCH 48
           HH   H H A   H A+    A+G H
Sbjct: 126 HHHHHHAHAAAAHHAAVAAAAASGLH 151


>AE014298-2747|AAF48866.1|  331|Drosophila melanogaster CG6540-PA
           protein.
          Length = 331

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 34  GCHTAMGCHTATGCHTATGCHTAT 57
           G HTA+G +++T  H  T  H  T
Sbjct: 78  GAHTAVGANSSTTAHGQTHSHHQT 101


>AE014134-989|AAF52303.1|  691|Drosophila melanogaster CG9019-PA
           protein.
          Length = 691

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 23  HHVSLHRHTARGCHTAMGCHTATGCH 48
           HH   H H A   H A+    A+G H
Sbjct: 126 HHHHHHAHAAAAHHAAVAAAAASGLH 151


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.132    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,289,047
Number of Sequences: 52641
Number of extensions: 114034
Number of successful extensions: 490
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 474
Number of HSP's gapped (non-prelim): 16
length of query: 57
length of database: 24,830,863
effective HSP length: 38
effective length of query: 19
effective length of database: 22,830,505
effective search space: 433779595
effective search space used: 433779595
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 53 (25.4 bits)